RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 STK26Q9P289 416 aa19.96■□□□□ 0.79
PTPN7-212ENST00000480836 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
PTPN7-212ENST00000480836 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
PTPN7-212ENST00000480836 XPCQ01831 940 aaPredicted RBP19.93■□□□□ 0.78
PTPN7-212ENST00000480836 CCDC144AA2RUR9 1427 aa19.92■□□□□ 0.78
PTPN7-212ENST00000480836 IFT172Q9UG01 1749 aa19.91■□□□□ 0.78
PTPN7-212ENST00000480836 ESCO1Q5FWF5 840 aa19.91■□□□□ 0.78
PTPN7-212ENST00000480836 FOXO3O43524 673 aa19.9■□□□□ 0.78
PTPN7-212ENST00000480836 NGLY1Q96IV0 654 aa19.9■□□□□ 0.78
PTPN7-212ENST00000480836 RGS12O14924 1447 aa19.89■□□□□ 0.77
PTPN7-212ENST00000480836 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
PTPN7-212ENST00000480836 CDK12Q9NYV4 1490 aaPredicted RBP19.88■□□□□ 0.77
PTPN7-212ENST00000480836 TECPR2O15040 1411 aa19.88■□□□□ 0.77
PTPN7-212ENST00000480836 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
PTPN7-212ENST00000480836 PXDNQ92626 1479 aa19.87■□□□□ 0.77
PTPN7-212ENST00000480836 PIK3C2GO75747 1445 aa19.87■□□□□ 0.77
PTPN7-212ENST00000480836 RBM6P78332 1123 aaKnown RBP19.87■□□□□ 0.77
PTPN7-212ENST00000480836 ANKRD30BQ9BXX2 1392 aa19.86■□□□□ 0.77
PTPN7-212ENST00000480836 CFAP70Q5T0N1 1121 aa19.86■□□□□ 0.77
PTPN7-212ENST00000480836 CDC42BPGQ6DT37 1551 aa19.86■□□□□ 0.77
PTPN7-212ENST00000480836 FNBP4Q8N3X1 1017 aaPredicted RBP19.85■□□□□ 0.77
PTPN7-212ENST00000480836 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
PTPN7-212ENST00000480836 USP21Q9UK80 565 aa19.84■□□□□ 0.77
PTPN7-212ENST00000480836 YTHDC2Q9H6S0 1430 aaKnown RBP19.84■□□□□ 0.77
PTPN7-212ENST00000480836 MYOM2P54296 1465 aa19.83■□□□□ 0.76
PTPN7-212ENST00000480836 COL22A1Q8NFW1 1626 aaPredicted RBP19.83■□□□□ 0.76
PTPN7-212ENST00000480836 NPHP3Q7Z494 1330 aa19.81■□□□□ 0.76
PTPN7-212ENST00000480836 BCL9LQ86UU0 1499 aa19.8■□□□□ 0.76
PTPN7-212ENST00000480836 NRXN1Q9ULB1 1477 aa19.79■□□□□ 0.76
PTPN7-212ENST00000480836 RAB3GAP2Q9H2M9 1393 aa19.79■□□□□ 0.76
PTPN7-212ENST00000480836 KNDC1Q76NI1 1749 aa19.79■□□□□ 0.76
PTPN7-212ENST00000480836 SIRT1Q96EB6 747 aa19.78■□□□□ 0.76
PTPN7-212ENST00000480836 FMN2Q9NZ56 1722 aa19.78■□□□□ 0.76
PTPN7-212ENST00000480836 RGPD8O14715 1765 aaPredicted RBP19.78■□□□□ 0.76
PTPN7-212ENST00000480836 ATRNO75882 1429 aa19.77■□□□□ 0.76
PTPN7-212ENST00000480836 SAFB2Q14151 953 aaKnown RBP eCLIP19.77■□□□□ 0.76
PTPN7-212ENST00000480836 TRPC5Q9UL62 973 aaPredicted RBP19.76■□□□□ 0.75
PTPN7-212ENST00000480836 SPATA31A3Q5VYP0 1347 aa19.76■□□□□ 0.75
PTPN7-212ENST00000480836 KRT28Q7Z3Y7 464 aa19.75■□□□□ 0.75
PTPN7-212ENST00000480836 PRAM1Q96QH2 718 aa19.75■□□□□ 0.75
PTPN7-212ENST00000480836 CABLES1Q8TDN4 633 aa19.74■□□□□ 0.75
PTPN7-212ENST00000480836 PHF8Q9UPP1 1060 aa19.72■□□□□ 0.75
PTPN7-212ENST00000480836 DHX57Q6P158 1386 aaKnown RBP19.71■□□□□ 0.75
PTPN7-212ENST00000480836 MARF1Q9Y4F3 1742 aaKnown RBP19.71■□□□□ 0.75
PTPN7-212ENST00000480836 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
PTPN7-212ENST00000480836 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
PTPN7-212ENST00000480836 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
PTPN7-212ENST00000480836 ADGRB1O14514 1584 aa19.7■□□□□ 0.74
PTPN7-212ENST00000480836 PMFBP1Q8TBY8 1022 aa19.69■□□□□ 0.74
PTPN7-212ENST00000480836 USP32Q8NFA0 1604 aa19.69■□□□□ 0.74
PTPN7-212ENST00000480836 SLIT2O94813 1529 aa19.68■□□□□ 0.74
PTPN7-212ENST00000480836 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
PTPN7-212ENST00000480836 TRAK1Q9UPV9 953 aa19.68■□□□□ 0.74
PTPN7-212ENST00000480836 PRR36Q9H6K5 1346 aa19.67■□□□□ 0.74
PTPN7-212ENST00000480836 UNC5CLQ8IV45 518 aa19.66■□□□□ 0.74
PTPN7-212ENST00000480836 GLI3P10071 1580 aa19.66■□□□□ 0.74
PTPN7-212ENST00000480836 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
PTPN7-212ENST00000480836 KIF1AQ12756 1690 aa19.65■□□□□ 0.74
PTPN7-212ENST00000480836 POGKQ9P215 609 aa19.64■□□□□ 0.73
PTPN7-212ENST00000480836 ATAD2Q6PL18 1390 aa19.64■□□□□ 0.73
PTPN7-212ENST00000480836 DLC1Q96QB1 1528 aa19.64■□□□□ 0.73
PTPN7-212ENST00000480836 RALGAPBQ86X10 1494 aa19.63■□□□□ 0.73
PTPN7-212ENST00000480836 TNS3Q68CZ2 1445 aa19.63■□□□□ 0.73
PTPN7-212ENST00000480836 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
PTPN7-212ENST00000480836 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
PTPN7-212ENST00000480836 PSME1Q06323 249 aa19.62■□□□□ 0.73
PTPN7-212ENST00000480836 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
PTPN7-212ENST00000480836 LMOD2Q6P5Q4 547 aa19.61■□□□□ 0.73
PTPN7-212ENST00000480836 SBNO1A3KN83 1393 aa19.6■□□□□ 0.73
PTPN7-212ENST00000480836 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.59■□□□□ 0.73
PTPN7-212ENST00000480836 ADGRB2O60241 1585 aa19.57■□□□□ 0.72
PTPN7-212ENST00000480836 ABCA3Q99758 1704 aa19.57■□□□□ 0.72
PTPN7-212ENST00000480836 WASLO00401 505 aaPredicted RBP19.57■□□□□ 0.72
PTPN7-212ENST00000480836 BRWD3Q6RI45 1802 aa19.57■□□□□ 0.72
PTPN7-212ENST00000480836 TRPM3Q9HCF6 1732 aaPredicted RBP19.56■□□□□ 0.72
PTPN7-212ENST00000480836 ONECUT3O60422 494 aaPredicted RBP19.56■□□□□ 0.72
PTPN7-212ENST00000480836 VPS72Q15906 364 aa19.56■□□□□ 0.72
PTPN7-212ENST00000480836 SEPT12Q8IYM1 358 aa19.56■□□□□ 0.72
PTPN7-212ENST00000480836 ANKARQ7Z5J8 1434 aa19.56■□□□□ 0.72
PTPN7-212ENST00000480836 HRCP23327 699 aa19.55■□□□□ 0.72
PTPN7-212ENST00000480836 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
PTPN7-212ENST00000480836 PLCH1Q4KWH8 1693 aa19.53■□□□□ 0.72
PTPN7-212ENST00000480836 DEFB132Q7Z7B7 95 aa19.53■□□□□ 0.72
PTPN7-212ENST00000480836 NBPF1Q3BBV0 1214 aa19.52■□□□□ 0.72
PTPN7-212ENST00000480836 ARHGEF10O15013 1369 aa19.52■□□□□ 0.72
PTPN7-212ENST00000480836 ALS2Q96Q42 1657 aa19.52■□□□□ 0.71
PTPN7-212ENST00000480836 EP400Q96L91 3159 aa19.52■□□□□ 0.71
PTPN7-212ENST00000480836 TULP4Q9NRJ4 1543 aa19.51■□□□□ 0.71
PTPN7-212ENST00000480836 BTG4Q9NY30 223 aa19.5■□□□□ 0.71
PTPN7-212ENST00000480836 CCDC125Q86Z20 511 aa19.49■□□□□ 0.71
PTPN7-212ENST00000480836 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
PTPN7-212ENST00000480836 CCDC9Q9Y3X0 531 aaKnown RBP19.49■□□□□ 0.71
PTPN7-212ENST00000480836 ARHGEF28Q8N1W1 1705 aaKnown RBP19.48■□□□□ 0.71
PTPN7-212ENST00000480836 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
PTPN7-212ENST00000480836 NGDNQ8NEJ9 315 aaKnown RBP19.48■□□□□ 0.71
PTPN7-212ENST00000480836 CDK19Q9BWU1 502 aa19.48■□□□□ 0.71
PTPN7-212ENST00000480836 NRAPQ86VF7 1730 aa19.48■□□□□ 0.71
PTPN7-212ENST00000480836 FAM182BQ5T319 152 aa19.47■□□□□ 0.71
PTPN7-212ENST00000480836 CRYBG1Q9Y4K1 1723 aa19.47■□□□□ 0.71
PTPN7-212ENST00000480836 ATP7BP35670 1465 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms