RNA–Protein interactions for RNA: ENST00000480007.1

CLASP1-212, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 4

Gene CLASP1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-212ENST00000480007 KDM4AO75164 1064 aa14.06□□□□□ -0.16
CLASP1-212ENST00000480007 TSR3Q9UJK0 312 aaKnown RBP14.06□□□□□ -0.16
CLASP1-212ENST00000480007 HPS5Q9UPZ3 1129 aa14.06□□□□□ -0.16
CLASP1-212ENST00000480007 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
CLASP1-212ENST00000480007 USP46P62068 366 aa14.05□□□□□ -0.16
CLASP1-212ENST00000480007 THSD4Q6ZMP0 1018 aa14.05□□□□□ -0.16
CLASP1-212ENST00000480007 KCTD12Q96CX2 325 aaKnown RBP14.05□□□□□ -0.16
CLASP1-212ENST00000480007 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
CLASP1-212ENST00000480007 PPP4CP60510 307 aa14.03□□□□□ -0.16
CLASP1-212ENST00000480007 KMT5BQ4FZB7 885 aa14.03□□□□□ -0.16
CLASP1-212ENST00000480007 FGD5Q6ZNL6 1462 aa14.03□□□□□ -0.16
CLASP1-212ENST00000480007 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
CLASP1-212ENST00000480007 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
CLASP1-212ENST00000480007 PCMTD1Q96MG8 357 aaPredicted RBP14.01□□□□□ -0.17
CLASP1-212ENST00000480007 PRR14Q9BWN1 585 aa14.01□□□□□ -0.17
CLASP1-212ENST00000480007 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
CLASP1-212ENST00000480007 NESP48681 1621 aa14.01□□□□□ -0.17
CLASP1-212ENST00000480007 CUX2O14529 1486 aa14□□□□□ -0.17
CLASP1-212ENST00000480007 HOXA2O43364 376 aa14□□□□□ -0.17
CLASP1-212ENST00000480007 ZEB1P37275 1124 aaPredicted RBP14□□□□□ -0.17
CLASP1-212ENST00000480007 CLK2P49760 499 aaKnown RBP14□□□□□ -0.17
CLASP1-212ENST00000480007 IGF1RP08069 1367 aa13.99□□□□□ -0.17
CLASP1-212ENST00000480007 MOXD2PA6NHM9 499 aa13.99□□□□□ -0.17
CLASP1-212ENST00000480007 FUT2Q10981 343 aa13.99□□□□□ -0.17
CLASP1-212ENST00000480007 POLR3EQ9NVU0 708 aa13.99□□□□□ -0.17
CLASP1-212ENST00000480007 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
CLASP1-212ENST00000480007 GJA5P36382 358 aa13.98□□□□□ -0.17
CLASP1-212ENST00000480007 RSBN1LQ6PCB5 846 aaPredicted RBP13.98□□□□□ -0.17
CLASP1-212ENST00000480007 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
CLASP1-212ENST00000480007 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
CLASP1-212ENST00000480007 PDS5BQ9NTI5 1447 aa13.98□□□□□ -0.17
CLASP1-212ENST00000480007 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
CLASP1-212ENST00000480007 SPTLC1O15269 473 aa13.97□□□□□ -0.17
CLASP1-212ENST00000480007 APLP1P51693 650 aa13.97□□□□□ -0.17
CLASP1-212ENST00000480007 RIC3Q7Z5B4 369 aa13.97□□□□□ -0.17
CLASP1-212ENST00000480007 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
CLASP1-212ENST00000480007 LIMD1Q9UGP4 676 aa13.96□□□□□ -0.17
CLASP1-212ENST00000480007 NDUFV2P19404 249 aa13.95□□□□□ -0.18
CLASP1-212ENST00000480007 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
CLASP1-212ENST00000480007 TUSC1Q2TAM9 212 aa13.94□□□□□ -0.18
CLASP1-212ENST00000480007 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
CLASP1-212ENST00000480007 PROCA1Q8NCQ7 364 aaPredicted RBP13.94□□□□□ -0.18
CLASP1-212ENST00000480007 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
CLASP1-212ENST00000480007 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
CLASP1-212ENST00000480007 NYAP1Q6ZVC0 841 aa13.93□□□□□ -0.18
CLASP1-212ENST00000480007 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
CLASP1-212ENST00000480007 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
CLASP1-212ENST00000480007 HLA-CQ95604 372 aa13.92□□□□□ -0.18
CLASP1-212ENST00000480007 FDX1P10109 184 aa13.91□□□□□ -0.18
CLASP1-212ENST00000480007 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
CLASP1-212ENST00000480007 GUCA2AQ02747 115 aa13.9□□□□□ -0.18
CLASP1-212ENST00000480007 MORN1Q5T089 497 aa13.9□□□□□ -0.18
CLASP1-212ENST00000480007 PTPN5P54829 565 aa13.89□□□□□ -0.19
CLASP1-212ENST00000480007 ATP1B4Q9UN42 357 aaPredicted RBP13.89□□□□□ -0.19
CLASP1-212ENST00000480007 PCDHGC3Q9UN70 934 aa13.89□□□□□ -0.19
CLASP1-212ENST00000480007 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
CLASP1-212ENST00000480007 PUS10Q3MIT2 529 aaKnown RBP13.88□□□□□ -0.19
CLASP1-212ENST00000480007 RNF166Q96A37 237 aaPredicted RBP13.88□□□□□ -0.19
CLASP1-212ENST00000480007 PCDHB3Q9Y5E6 796 aa13.88□□□□□ -0.19
CLASP1-212ENST00000480007 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
CLASP1-212ENST00000480007 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
CLASP1-212ENST00000480007 PCDHB15Q9Y5E8 787 aa13.87□□□□□ -0.19
CLASP1-212ENST00000480007 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
CLASP1-212ENST00000480007 PRPF38BQ5VTL8 546 aaKnown RBP13.86□□□□□ -0.19
CLASP1-212ENST00000480007 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
CLASP1-212ENST00000480007 QPCTQ16769 361 aa13.84□□□□□ -0.19
CLASP1-212ENST00000480007 PPP2R2DQ66LE6 453 aa13.84□□□□□ -0.19
CLASP1-212ENST00000480007 SLC27A5Q9Y2P5 690 aa13.84□□□□□ -0.19
CLASP1-212ENST00000480007 LILRB3O75022 631 aa13.83□□□□□ -0.2
CLASP1-212ENST00000480007 BLOC1S3Q6QNY0 202 aa13.83□□□□□ -0.2
CLASP1-212ENST00000480007 ZBTB3Q9H5J0 574 aa13.83□□□□□ -0.2
CLASP1-212ENST00000480007 TTBK1Q5TCY1 1321 aaPredicted RBP13.82□□□□□ -0.2
CLASP1-212ENST00000480007 NR1I2O75469 434 aa13.81□□□□□ -0.2
CLASP1-212ENST00000480007 Q3C1V9 767 aa13.81□□□□□ -0.2
CLASP1-212ENST00000480007 FBXO31Q5XUX0 539 aaPredicted RBP13.81□□□□□ -0.2
CLASP1-212ENST00000480007 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
CLASP1-212ENST00000480007 CUL7Q14999 1698 aa13.81□□□□□ -0.2
CLASP1-212ENST00000480007 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
CLASP1-212ENST00000480007 ARHGAP35Q9NRY4 1499 aa13.8□□□□□ -0.2
CLASP1-212ENST00000480007 MTMR2Q13614 643 aa13.8□□□□□ -0.2
CLASP1-212ENST00000480007 HCSTQ9UBK5 93 aa13.8□□□□□ -0.2
CLASP1-212ENST00000480007 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
CLASP1-212ENST00000480007 RFC5P40937 340 aa13.79□□□□□ -0.2
CLASP1-212ENST00000480007 NUTM2BA6NNL0 878 aaPredicted RBP13.78□□□□□ -0.2
CLASP1-212ENST00000480007 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
CLASP1-212ENST00000480007 C6orf229H3BNL8 230 aa13.78□□□□□ -0.2
CLASP1-212ENST00000480007 NUTM2DQ5VT03 806 aaPredicted RBP13.78□□□□□ -0.2
CLASP1-212ENST00000480007 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
CLASP1-212ENST00000480007 SCUBE3Q8IX30 993 aa13.78□□□□□ -0.2
CLASP1-212ENST00000480007 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
CLASP1-212ENST00000480007 SPDYE5A6NIY4 337 aa13.77□□□□□ -0.21
CLASP1-212ENST00000480007 COPS2P61201 443 aa13.77□□□□□ -0.21
CLASP1-212ENST00000480007 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.21
CLASP1-212ENST00000480007 MTRQ99707 1265 aa13.76□□□□□ -0.21
CLASP1-212ENST00000480007 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
CLASP1-212ENST00000480007 MRC2Q9UBG0 1479 aa13.75□□□□□ -0.21
CLASP1-212ENST00000480007 MMRN1Q13201 1228 aa13.75□□□□□ -0.21
CLASP1-212ENST00000480007 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
CLASP1-212ENST00000480007 SYMPKQ92797 1274 aaKnown RBP13.75□□□□□ -0.21
CLASP1-212ENST00000480007 THAP11Q96EK4 314 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms