RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 PROM2Q8N271 834 aa13.69□□□□□ -0.22
CD46-214ENST00000480003 SETBP1Q9Y6X0 1596 aa13.69□□□□□ -0.22
CD46-214ENST00000480003 METP08581 1390 aa13.68□□□□□ -0.22
CD46-214ENST00000480003 PIK3R4Q99570 1358 aa13.68□□□□□ -0.22
CD46-214ENST00000480003 ALKQ9UM73 1620 aa13.68□□□□□ -0.22
CD46-214ENST00000480003 KCNA6P17658 529 aa13.67□□□□□ -0.22
CD46-214ENST00000480003 NRXN3Q9Y4C0 1643 aa13.66□□□□□ -0.22
CD46-214ENST00000480003 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
CD46-214ENST00000480003 SIRT1Q96EB6 747 aa13.66□□□□□ -0.22
CD46-214ENST00000480003 AMOTL2Q9Y2J4 779 aa13.66□□□□□ -0.22
CD46-214ENST00000480003 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
CD46-214ENST00000480003 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
CD46-214ENST00000480003 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
CD46-214ENST00000480003 POLR1AO95602 1720 aaPredicted RBP13.64□□□□□ -0.23
CD46-214ENST00000480003 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
CD46-214ENST00000480003 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
CD46-214ENST00000480003 DISP3Q9P2K9 1392 aa13.63□□□□□ -0.23
CD46-214ENST00000480003 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
CD46-214ENST00000480003 ADGRB1O14514 1584 aa13.62□□□□□ -0.23
CD46-214ENST00000480003 CARD11Q9BXL7 1154 aa13.62□□□□□ -0.23
CD46-214ENST00000480003 CREBZFQ9NS37 354 aa13.62□□□□□ -0.23
CD46-214ENST00000480003 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
CD46-214ENST00000480003 ROCK2O75116 1388 aaKnown RBP13.61□□□□□ -0.23
CD46-214ENST00000480003 STK26Q9P289 416 aa13.61□□□□□ -0.23
CD46-214ENST00000480003 TRAK1Q9UPV9 953 aa13.61□□□□□ -0.23
CD46-214ENST00000480003 YTHDC2Q9H6S0 1430 aaKnown RBP13.61□□□□□ -0.23
CD46-214ENST00000480003 KIAA1210Q9ULL0 1709 aa13.61□□□□□ -0.23
CD46-214ENST00000480003 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
CD46-214ENST00000480003 SETD1AO15047 1707 aaKnown RBP13.6□□□□□ -0.23
CD46-214ENST00000480003 ZNF335Q9H4Z2 1342 aaPredicted RBP13.6□□□□□ -0.23
CD46-214ENST00000480003 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
CD46-214ENST00000480003 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
CD46-214ENST00000480003 TECPR2O15040 1411 aa13.58□□□□□ -0.24
CD46-214ENST00000480003 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
CD46-214ENST00000480003 PROSER2Q86WR7 435 aaPredicted RBP13.57□□□□□ -0.24
CD46-214ENST00000480003 CHD2O14647 1828 aaKnown RBP13.57□□□□□ -0.24
CD46-214ENST00000480003 ROBO2Q9HCK4 1378 aa13.57□□□□□ -0.24
CD46-214ENST00000480003 IQSEC2Q5JU85 1478 aa13.56□□□□□ -0.24
CD46-214ENST00000480003 SOCS7O14512 581 aa13.56□□□□□ -0.24
CD46-214ENST00000480003 LAMC1P11047 1609 aa13.56□□□□□ -0.24
CD46-214ENST00000480003 PRAM1Q96QH2 718 aa13.55□□□□□ -0.24
CD46-214ENST00000480003 FAM135BQ49AJ0 1406 aa13.55□□□□□ -0.24
CD46-214ENST00000480003 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
CD46-214ENST00000480003 EIF4G2P78344 907 aaKnown RBP eCLIP13.54□□□□□ -0.24
CD46-214ENST00000480003 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
CD46-214ENST00000480003 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
CD46-214ENST00000480003 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
CD46-214ENST00000480003 HSPA5P11021 654 aaKnown RBP13.53□□□□□ -0.24
CD46-214ENST00000480003 POGKQ9P215 609 aa13.53□□□□□ -0.24
CD46-214ENST00000480003 PTCH1Q13635 1447 aa13.53□□□□□ -0.24
CD46-214ENST00000480003 NCOA3Q9Y6Q9 1424 aa13.53□□□□□ -0.24
CD46-214ENST00000480003 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.25
CD46-214ENST00000480003 TESK2Q96S53 571 aa13.52□□□□□ -0.25
CD46-214ENST00000480003 CENPJQ9HC77 1338 aaPredicted RBP13.52□□□□□ -0.25
CD46-214ENST00000480003 NWD1Q149M9 1564 aa13.52□□□□□ -0.25
CD46-214ENST00000480003 LTBP4Q8N2S1 1624 aa13.52□□□□□ -0.25
CD46-214ENST00000480003 STRCP1A6NGW2 1772 aa13.51□□□□□ -0.25
CD46-214ENST00000480003 XRN1Q8IZH2 1706 aaKnown RBP13.51□□□□□ -0.25
CD46-214ENST00000480003 USP47Q96K76 1375 aa13.51□□□□□ -0.25
CD46-214ENST00000480003 FKBP8Q14318 412 aa13.51□□□□□ -0.25
CD46-214ENST00000480003 LRRC7Q96NW7 1537 aa13.5□□□□□ -0.25
CD46-214ENST00000480003 NKTRP30414 1462 aaKnown RBP13.5□□□□□ -0.25
CD46-214ENST00000480003 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
CD46-214ENST00000480003 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.251e-6■■□□□ 13.1
CD46-214ENST00000480003 C19orf44Q9H6X5 657 aa13.5□□□□□ -0.25
CD46-214ENST00000480003 CPS1P31327 1500 aa13.49□□□□□ -0.25
CD46-214ENST00000480003 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
CD46-214ENST00000480003 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
CD46-214ENST00000480003 UBAP1LF5GYI3 381 aa13.48□□□□□ -0.25
CD46-214ENST00000480003 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
CD46-214ENST00000480003 MINK1Q8N4C8 1332 aaPredicted RBP13.47□□□□□ -0.25
CD46-214ENST00000480003 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
CD46-214ENST00000480003 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
CD46-214ENST00000480003 SBNO2Q9Y2G9 1366 aa13.46□□□□□ -0.25
CD46-214ENST00000480003 WASLO00401 505 aaPredicted RBP13.46□□□□□ -0.25
CD46-214ENST00000480003 PUS7Q96PZ0 661 aaKnown RBP13.45□□□□□ -0.26
CD46-214ENST00000480003 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
CD46-214ENST00000480003 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
CD46-214ENST00000480003 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
CD46-214ENST00000480003 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
CD46-214ENST00000480003 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
CD46-214ENST00000480003 ADGRL3Q9HAR2 1447 aa13.43□□□□□ -0.26
CD46-214ENST00000480003 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
CD46-214ENST00000480003 TMF1P82094 1093 aa13.42□□□□□ -0.26
CD46-214ENST00000480003 C14orf37Q86TY3 774 aa13.42□□□□□ -0.26
CD46-214ENST00000480003 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
CD46-214ENST00000480003 MSH6P52701 1360 aa13.41□□□□□ -0.26
CD46-214ENST00000480003 ATF3P18847 181 aa13.4□□□□□ -0.26
CD46-214ENST00000480003 CABP2Q9NPB3 220 aa13.4□□□□□ -0.26
CD46-214ENST00000480003 DCCP43146 1447 aa13.39□□□□□ -0.27
CD46-214ENST00000480003 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
CD46-214ENST00000480003 GABBR2O75899 941 aa13.39□□□□□ -0.27
CD46-214ENST00000480003 NUDT16Q96DE0 195 aaKnown RBP13.39□□□□□ -0.27
CD46-214ENST00000480003 SLAIN2Q9P270 581 aa13.39□□□□□ -0.27
CD46-214ENST00000480003 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
CD46-214ENST00000480003 TOM1O60784 492 aa13.38□□□□□ -0.27
CD46-214ENST00000480003 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
CD46-214ENST00000480003 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
CD46-214ENST00000480003 PLEKHG3A1L390 1219 aa13.37□□□□□ -0.27
CD46-214ENST00000480003 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms