RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 C19orf44Q9H6X5 657 aa16.43■□□□□ 0.22
TRAPPC12-219ENST00000479955 EVC2Q86UK5 1308 aa16.43■□□□□ 0.22
TRAPPC12-219ENST00000479955 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
TRAPPC12-219ENST00000479955 PLEKHH1Q9ULM0 1364 aa16.42■□□□□ 0.22
TRAPPC12-219ENST00000479955 LRRC7Q96NW7 1537 aa16.42■□□□□ 0.22
TRAPPC12-219ENST00000479955 TESK2Q96S53 571 aa16.41■□□□□ 0.22
TRAPPC12-219ENST00000479955 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC12-219ENST00000479955 LTBP4Q8N2S1 1624 aa16.41■□□□□ 0.22
TRAPPC12-219ENST00000479955 ADGRL3Q9HAR2 1447 aa16.4■□□□□ 0.22
TRAPPC12-219ENST00000479955 PUS7Q96PZ0 661 aaKnown RBP16.4■□□□□ 0.22
TRAPPC12-219ENST00000479955 MSH6P52701 1360 aa16.39■□□□□ 0.21
TRAPPC12-219ENST00000479955 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC12-219ENST00000479955 HIRIP3Q9BW71 556 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC12-219ENST00000479955 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC12-219ENST00000479955 ATF3P18847 181 aa16.38■□□□□ 0.21
TRAPPC12-219ENST00000479955 CADPS2Q86UW7 1296 aa16.38■□□□□ 0.21
TRAPPC12-219ENST00000479955 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
TRAPPC12-219ENST00000479955 ADGRB2O60241 1585 aa16.38■□□□□ 0.21
TRAPPC12-219ENST00000479955 CDK19Q9BWU1 502 aa16.37■□□□□ 0.21
TRAPPC12-219ENST00000479955 DCCP43146 1447 aa16.36■□□□□ 0.21
TRAPPC12-219ENST00000479955 SRPK2P78362 688 aaKnown RBP16.36■□□□□ 0.21
TRAPPC12-219ENST00000479955 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
TRAPPC12-219ENST00000479955 NALCNQ8IZF0 1738 aa16.35■□□□□ 0.21
TRAPPC12-219ENST00000479955 XIRP1Q702N8 1843 aaKnown RBP16.34■□□□□ 0.21
TRAPPC12-219ENST00000479955 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC12-219ENST00000479955 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
TRAPPC12-219ENST00000479955 ATAD2Q6PL18 1390 aa16.32■□□□□ 0.2
TRAPPC12-219ENST00000479955 CERKQ8TCT0 537 aa16.32■□□□□ 0.2
TRAPPC12-219ENST00000479955 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
TRAPPC12-219ENST00000479955 ANKARQ7Z5J8 1434 aa16.31■□□□□ 0.2
TRAPPC12-219ENST00000479955 DISP3Q9P2K9 1392 aa16.31■□□□□ 0.2
TRAPPC12-219ENST00000479955 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
TRAPPC12-219ENST00000479955 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
TRAPPC12-219ENST00000479955 NUDT16Q96DE0 195 aaKnown RBP16.3■□□□□ 0.2
TRAPPC12-219ENST00000479955 FMN2Q9NZ56 1722 aa16.3■□□□□ 0.2
TRAPPC12-219ENST00000479955 TOM1O60784 492 aa16.29■□□□□ 0.2
TRAPPC12-219ENST00000479955 NINLQ9Y2I6 1382 aa16.28■□□□□ 0.2
TRAPPC12-219ENST00000479955 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
TRAPPC12-219ENST00000479955 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC12-219ENST00000479955 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
TRAPPC12-219ENST00000479955 SLAIN2Q9P270 581 aa16.28■□□□□ 0.2
TRAPPC12-219ENST00000479955 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
TRAPPC12-219ENST00000479955 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
TRAPPC12-219ENST00000479955 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
TRAPPC12-219ENST00000479955 TMC1Q8TDI8 760 aa16.26■□□□□ 0.19
TRAPPC12-219ENST00000479955 WASHC2AQ641Q2 1341 aa16.25■□□□□ 0.19
TRAPPC12-219ENST00000479955 ESCO1Q5FWF5 840 aa16.25■□□□□ 0.19
TRAPPC12-219ENST00000479955 MST1RQ04912 1400 aa16.25■□□□□ 0.19
TRAPPC12-219ENST00000479955 ATP7BP35670 1465 aa16.24■□□□□ 0.19
TRAPPC12-219ENST00000479955 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
TRAPPC12-219ENST00000479955 PLEKHG3A1L390 1219 aa16.24■□□□□ 0.19
TRAPPC12-219ENST00000479955 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
TRAPPC12-219ENST00000479955 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
TRAPPC12-219ENST00000479955 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
TRAPPC12-219ENST00000479955 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
TRAPPC12-219ENST00000479955 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC12-219ENST00000479955 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
TRAPPC12-219ENST00000479955 UBAP1LF5GYI3 381 aa16.22■□□□□ 0.19
TRAPPC12-219ENST00000479955 HDGFL2Q7Z4V5 671 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC12-219ENST00000479955 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
TRAPPC12-219ENST00000479955 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC12-219ENST00000479955 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
TRAPPC12-219ENST00000479955 SLC12A5Q9H2X9 1139 aa16.21■□□□□ 0.19
TRAPPC12-219ENST00000479955 ORAI2Q96SN7 254 aa16.2■□□□□ 0.18
TRAPPC12-219ENST00000479955 KIF1AQ12756 1690 aa16.2■□□□□ 0.18
TRAPPC12-219ENST00000479955 TOPAZ1Q8N9V7 1692 aa16.2■□□□□ 0.18
TRAPPC12-219ENST00000479955 ACEP12821 1306 aa16.19■□□□□ 0.18
TRAPPC12-219ENST00000479955 PSME1Q06323 249 aa16.18■□□□□ 0.18
TRAPPC12-219ENST00000479955 PMFBP1Q8TBY8 1022 aa16.18■□□□□ 0.18
TRAPPC12-219ENST00000479955 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC12-219ENST00000479955 BRD4O60885 1362 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC12-219ENST00000479955 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
TRAPPC12-219ENST00000479955 BRINP3Q76B58 766 aa16.17■□□□□ 0.18
TRAPPC12-219ENST00000479955 NPHP3Q7Z494 1330 aa16.17■□□□□ 0.18
TRAPPC12-219ENST00000479955 PANK3Q9H999 370 aa16.16■□□□□ 0.18
TRAPPC12-219ENST00000479955 MYOM1P52179 1685 aa16.15■□□□□ 0.18
TRAPPC12-219ENST00000479955 FOXO3O43524 673 aa16.15■□□□□ 0.18
TRAPPC12-219ENST00000479955 CPSF1Q10570 1443 aaKnown RBP16.15■□□□□ 0.18
TRAPPC12-219ENST00000479955 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
TRAPPC12-219ENST00000479955 KTN1Q86UP2 1357 aaKnown RBP16.14■□□□□ 0.17
TRAPPC12-219ENST00000479955 PIP4K2BP78356 416 aa16.14■□□□□ 0.17
TRAPPC12-219ENST00000479955 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
TRAPPC12-219ENST00000479955 AKAP12Q02952 1782 aa16.13■□□□□ 0.17
TRAPPC12-219ENST00000479955 A0A1W2PP64 1363 aa16.13■□□□□ 0.17
TRAPPC12-219ENST00000479955 ROBO1Q9Y6N7 1651 aa16.12■□□□□ 0.17
TRAPPC12-219ENST00000479955 KRT28Q7Z3Y7 464 aa16.12■□□□□ 0.17
TRAPPC12-219ENST00000479955 KNSTRNQ9Y448 316 aa16.12■□□□□ 0.17
TRAPPC12-219ENST00000479955 CD163L1Q9NR16 1453 aa16.11■□□□□ 0.17
TRAPPC12-219ENST00000479955 USP6P35125 1406 aa16.11■□□□□ 0.17
TRAPPC12-219ENST00000479955 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
TRAPPC12-219ENST00000479955 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
TRAPPC12-219ENST00000479955 MON2Q7Z3U7 1717 aa16.09■□□□□ 0.17
TRAPPC12-219ENST00000479955 CARD14Q9BXL6 1004 aa16.09■□□□□ 0.17
TRAPPC12-219ENST00000479955 CGNL1Q0VF96 1302 aa16.09■□□□□ 0.17
TRAPPC12-219ENST00000479955 PER1O15534 1290 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC12-219ENST00000479955 PAK3O75914 559 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC12-219ENST00000479955 SOS2Q07890 1332 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC12-219ENST00000479955 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
TRAPPC12-219ENST00000479955 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.16
TRAPPC12-219ENST00000479955 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms