RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-211ENST00000479092 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
PTPN7-211ENST00000479092 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
PTPN7-211ENST00000479092 WAPLQ7Z5K2 1190 aa16.93■□□□□ 0.3
PTPN7-211ENST00000479092 CDC42BPGQ6DT37 1551 aa16.93■□□□□ 0.3
PTPN7-211ENST00000479092 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-211ENST00000479092 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
PTPN7-211ENST00000479092 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
PTPN7-211ENST00000479092 ARHGEF28Q8N1W1 1705 aaKnown RBP16.91■□□□□ 0.3
PTPN7-211ENST00000479092 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
PTPN7-211ENST00000479092 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTPN7-211ENST00000479092 CARD11Q9BXL7 1154 aa16.9■□□□□ 0.3
PTPN7-211ENST00000479092 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
PTPN7-211ENST00000479092 CENPJQ9HC77 1338 aaPredicted RBP16.87■□□□□ 0.29
PTPN7-211ENST00000479092 MST1RQ04912 1400 aa16.87■□□□□ 0.29
PTPN7-211ENST00000479092 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
PTPN7-211ENST00000479092 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
PTPN7-211ENST00000479092 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
PTPN7-211ENST00000479092 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
PTPN7-211ENST00000479092 ROBO1Q9Y6N7 1651 aa16.84■□□□□ 0.29
PTPN7-211ENST00000479092 C1orf167Q5SNV9 1468 aa16.83■□□□□ 0.28
PTPN7-211ENST00000479092 QRICH2Q9H0J4 1663 aa16.82■□□□□ 0.28
PTPN7-211ENST00000479092 FMN2Q9NZ56 1722 aa16.82■□□□□ 0.28
PTPN7-211ENST00000479092 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
PTPN7-211ENST00000479092 ANKARQ7Z5J8 1434 aa16.79■□□□□ 0.28
PTPN7-211ENST00000479092 USP47Q96K76 1375 aa16.79■□□□□ 0.28
PTPN7-211ENST00000479092 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
PTPN7-211ENST00000479092 BRINP3Q76B58 766 aa16.79■□□□□ 0.28
PTPN7-211ENST00000479092 WASLO00401 505 aaPredicted RBP16.78■□□□□ 0.28
PTPN7-211ENST00000479092 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.28
PTPN7-211ENST00000479092 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.27
PTPN7-211ENST00000479092 AHDC1Q5TGY3 1603 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-211ENST00000479092 HSPA1LP34931 641 aa16.75■□□□□ 0.27
PTPN7-211ENST00000479092 SRPK2P78362 688 aaKnown RBP16.75■□□□□ 0.27
PTPN7-211ENST00000479092 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
PTPN7-211ENST00000479092 ATP7BP35670 1465 aa16.74■□□□□ 0.27
PTPN7-211ENST00000479092 EVC2Q86UK5 1308 aa16.74■□□□□ 0.27
PTPN7-211ENST00000479092 ORAI2Q96SN7 254 aa16.74■□□□□ 0.27
PTPN7-211ENST00000479092 CDK19Q9BWU1 502 aa16.73■□□□□ 0.27
PTPN7-211ENST00000479092 NHSL1Q5SYE7 1610 aa16.72■□□□□ 0.27
PTPN7-211ENST00000479092 USP32Q8NFA0 1604 aa16.72■□□□□ 0.27
PTPN7-211ENST00000479092 ST20-MTHFSA0A0A6YYL1 179 aa16.72■□□□□ 0.27
PTPN7-211ENST00000479092 PHLPP1O60346 1717 aa16.72■□□□□ 0.27
PTPN7-211ENST00000479092 NPHP3Q7Z494 1330 aa16.71■□□□□ 0.27
PTPN7-211ENST00000479092 ITSN1Q15811 1721 aa16.71■□□□□ 0.27
PTPN7-211ENST00000479092 SLC24A1O60721 1099 aa16.71■□□□□ 0.27
PTPN7-211ENST00000479092 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
PTPN7-211ENST00000479092 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
PTPN7-211ENST00000479092 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
PTPN7-211ENST00000479092 COL16A1Q07092 1604 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-211ENST00000479092 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
PTPN7-211ENST00000479092 ATAD2Q6PL18 1390 aa16.68■□□□□ 0.26
PTPN7-211ENST00000479092 EIF4G2P78344 907 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPN7-211ENST00000479092 TOPAZ1Q8N9V7 1692 aa16.68■□□□□ 0.26
PTPN7-211ENST00000479092 FOXO3O43524 673 aa16.67■□□□□ 0.26
PTPN7-211ENST00000479092 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
PTPN7-211ENST00000479092 CCDC61Q9Y6R9 512 aa16.67■□□□□ 0.26
PTPN7-211ENST00000479092 PPIP5K1Q6PFW1 1433 aa16.67■□□□□ 0.26
PTPN7-211ENST00000479092 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
PTPN7-211ENST00000479092 TESK2Q96S53 571 aa16.66■□□□□ 0.26
PTPN7-211ENST00000479092 RGPD8O14715 1765 aaPredicted RBP16.65■□□□□ 0.26
PTPN7-211ENST00000479092 TMF1P82094 1093 aa16.65■□□□□ 0.26
PTPN7-211ENST00000479092 NGDNQ8NEJ9 315 aaKnown RBP16.65■□□□□ 0.26
PTPN7-211ENST00000479092 PXDNQ92626 1479 aa16.65■□□□□ 0.26
PTPN7-211ENST00000479092 JCADQ9P266 1359 aa16.64■□□□□ 0.26
PTPN7-211ENST00000479092 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-211ENST00000479092 HSPA5P11021 654 aaKnown RBP16.63■□□□□ 0.25
PTPN7-211ENST00000479092 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
PTPN7-211ENST00000479092 LRRC59Q96AG4 307 aaKnown RBP16.63■□□□□ 0.25
PTPN7-211ENST00000479092 DISP3Q9P2K9 1392 aa16.63■□□□□ 0.25
PTPN7-211ENST00000479092 PSME1Q06323 249 aa16.62■□□□□ 0.25
PTPN7-211ENST00000479092 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
PTPN7-211ENST00000479092 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
PTPN7-211ENST00000479092 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
PTPN7-211ENST00000479092 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
PTPN7-211ENST00000479092 SHPRHQ149N8 1683 aa16.6■□□□□ 0.25
PTPN7-211ENST00000479092 PLEKHG3A1L390 1219 aa16.6■□□□□ 0.25
PTPN7-211ENST00000479092 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
PTPN7-211ENST00000479092 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
PTPN7-211ENST00000479092 ACEP12821 1306 aa16.6■□□□□ 0.25
PTPN7-211ENST00000479092 ZEB1P37275 1124 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-211ENST00000479092 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
PTPN7-211ENST00000479092 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
PTPN7-211ENST00000479092 NINLQ9Y2I6 1382 aa16.59■□□□□ 0.25
PTPN7-211ENST00000479092 PNPLA6Q8IY17 1366 aa16.58■□□□□ 0.24
PTPN7-211ENST00000479092 ARHGEF10O15013 1369 aa16.57■□□□□ 0.24
PTPN7-211ENST00000479092 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
PTPN7-211ENST00000479092 SPATA31A3Q5VYP0 1347 aa16.56■□□□□ 0.24
PTPN7-211ENST00000479092 PAK3O75914 559 aaPredicted RBP16.56■□□□□ 0.24
PTPN7-211ENST00000479092 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
PTPN7-211ENST00000479092 USP6P35125 1406 aa16.55■□□□□ 0.24
PTPN7-211ENST00000479092 TRPM3Q9HCF6 1732 aaPredicted RBP16.55■□□□□ 0.24
PTPN7-211ENST00000479092 BRD4O60885 1362 aaPredicted RBP16.54■□□□□ 0.24
PTPN7-211ENST00000479092 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
PTPN7-211ENST00000479092 POLR3GLQ9BT43 218 aa16.54■□□□□ 0.24
PTPN7-211ENST00000479092 TERF2IPQ9NYB0 399 aa16.54■□□□□ 0.24
PTPN7-211ENST00000479092 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
PTPN7-211ENST00000479092 COL22A1Q8NFW1 1626 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-211ENST00000479092 MED1Q15648 1581 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-211ENST00000479092 ZNF692Q9BU19 519 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-211ENST00000479092 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms