RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 MRGPRX2Q96LB1 330 aa4.18□□□□□ -1.74
SRRM1-211ENST00000478890 REPIN1Q9BWE0 567 aaKnown RBP4.18□□□□□ -1.74
SRRM1-211ENST00000478890 PHF20L1A8MW92 1017 aa4.17□□□□□ -1.74
SRRM1-211ENST00000478890 ZBTB24O43167 697 aaPredicted RBP4.17□□□□□ -1.74
SRRM1-211ENST00000478890 FURINP09958 794 aa4.17□□□□□ -1.74
SRRM1-211ENST00000478890 NUDT18Q6ZVK8 323 aa4.17□□□□□ -1.74
SRRM1-211ENST00000478890 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
SRRM1-211ENST00000478890 KRTAP4-5Q9BYR2 181 aa4.17□□□□□ -1.74
SRRM1-211ENST00000478890 FCF1Q9Y324 198 aaKnown RBP4.17□□□□□ -1.74
SRRM1-211ENST00000478890 ARID1BQ8NFD5 2236 aaPredicted RBP4.17□□□□□ -1.74
SRRM1-211ENST00000478890 CAPN5O15484 640 aaPredicted RBP4.16□□□□□ -1.74
SRRM1-211ENST00000478890 ACTN4O43707 911 aaKnown RBP4.16□□□□□ -1.74
SRRM1-211ENST00000478890 ZFP42Q96MM3 310 aa4.16□□□□□ -1.74
SRRM1-211ENST00000478890 YBX3P16989 372 aaKnown RBP eCLIP4.15□□□□□ -1.75
SRRM1-211ENST00000478890 PDE4AP27815 886 aa4.15□□□□□ -1.75
SRRM1-211ENST00000478890 EN1Q05925 392 aaPredicted RBP4.15□□□□□ -1.75
SRRM1-211ENST00000478890 TSR1Q2NL82 804 aaKnown RBP4.15□□□□□ -1.75
SRRM1-211ENST00000478890 KMT5BQ4FZB7 885 aa4.15□□□□□ -1.75
SRRM1-211ENST00000478890 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
SRRM1-211ENST00000478890 DNAJC5Q9H3Z4 198 aa4.15□□□□□ -1.75
SRRM1-211ENST00000478890 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.15□□□□□ -1.75
SRRM1-211ENST00000478890 MAP3K7O43318 606 aa4.14□□□□□ -1.75
SRRM1-211ENST00000478890 ZMYM1Q5SVZ6 1142 aa4.14□□□□□ -1.75
SRRM1-211ENST00000478890 RTN4Q9NQC3 1192 aaKnown RBP4.14□□□□□ -1.75
SRRM1-211ENST00000478890 GTPBP6O43824 516 aaPredicted RBP4.13□□□□□ -1.75
SRRM1-211ENST00000478890 PPFIA3O75145 1194 aa4.13□□□□□ -1.75
SRRM1-211ENST00000478890 DDX27Q96GQ7 796 aaKnown RBP4.13□□□□□ -1.75
SRRM1-211ENST00000478890 LARP6Q9BRS8 491 aaKnown RBP4.13□□□□□ -1.75
SRRM1-211ENST00000478890 EMILIN3Q9NT22 766 aa4.13□□□□□ -1.75
SRRM1-211ENST00000478890 WHAMMQ8TF30 809 aa4.12□□□□□ -1.75
SRRM1-211ENST00000478890 SPSB2Q99619 263 aa4.12□□□□□ -1.75
SRRM1-211ENST00000478890 BBXQ8WY36 941 aaPredicted RBP4.11□□□□□ -1.75
SRRM1-211ENST00000478890 CFAP44Q96MT7 982 aa4.11□□□□□ -1.75
SRRM1-211ENST00000478890 COL25A1Q9BXS0 654 aaPredicted RBP4.11□□□□□ -1.75
SRRM1-211ENST00000478890 RBM27Q9P2N5 1060 aaKnown RBP4.11□□□□□ -1.75
SRRM1-211ENST00000478890 SCO2A0A1W2PP80 73 aa4.1□□□□□ -1.75
SRRM1-211ENST00000478890 SPRYD3Q8NCJ5 442 aa4.1□□□□□ -1.75
SRRM1-211ENST00000478890 NCKAP5LQ9HCH0 1330 aa4.1□□□□□ -1.75
SRRM1-211ENST00000478890 MAP3K10Q02779 954 aa4.09□□□□□ -1.75
SRRM1-211ENST00000478890 TRIM32Q13049 653 aa4.09□□□□□ -1.75
SRRM1-211ENST00000478890 SCARF1Q14162 830 aa4.09□□□□□ -1.75
SRRM1-211ENST00000478890 PAXIP1Q6ZW49 1069 aaPredicted RBP4.09□□□□□ -1.75
SRRM1-211ENST00000478890 GPR161Q8N6U8 529 aaKnown RBP4.09□□□□□ -1.75
SRRM1-211ENST00000478890 SOBPA7XYQ1 873 aa4.08□□□□□ -1.76
SRRM1-211ENST00000478890 ALDH1A1P00352 501 aa4.08□□□□□ -1.76
SRRM1-211ENST00000478890 NBPF11Q86T75 865 aa4.08□□□□□ -1.76
SRRM1-211ENST00000478890 SCUBE3Q8IX30 993 aa4.08□□□□□ -1.76
SRRM1-211ENST00000478890 BEND7Q8N7W2 519 aaPredicted RBP4.08□□□□□ -1.76
SRRM1-211ENST00000478890 NBR1Q14596 966 aa4.07□□□□□ -1.76
SRRM1-211ENST00000478890 PODNQ7Z5L7 613 aa4.07□□□□□ -1.76
SRRM1-211ENST00000478890 ZFP64Q9NPA5 681 aa4.07□□□□□ -1.76
SRRM1-211ENST00000478890 ENAMQ9NRM1 1142 aa4.07□□□□□ -1.76
SRRM1-211ENST00000478890 CFHP08603 1231 aa4.06□□□□□ -1.76
SRRM1-211ENST00000478890 TXKP42681 527 aa4.06□□□□□ -1.76
SRRM1-211ENST00000478890 FZD5Q13467 585 aa4.06□□□□□ -1.76
SRRM1-211ENST00000478890 MRPL14Q6P1L8 145 aaKnown RBP4.06□□□□□ -1.76
SRRM1-211ENST00000478890 CADPS2Q86UW7 1296 aa4.06□□□□□ -1.76
SRRM1-211ENST00000478890 DDX12PQ92771 950 aa4.06□□□□□ -1.76
SRRM1-211ENST00000478890 MAN1A2O60476 641 aa4.05□□□□□ -1.76
SRRM1-211ENST00000478890 MFSD10Q14728 455 aa4.05□□□□□ -1.76
SRRM1-211ENST00000478890 WDR70Q9NW82 654 aa4.05□□□□□ -1.76
SRRM1-211ENST00000478890 CNTNAP5Q8WYK1 1306 aa4.04□□□□□ -1.76
SRRM1-211ENST00000478890 ITGB7P26010 798 aa4.04□□□□□ -1.76
SRRM1-211ENST00000478890 RNFT1Q5M7Z0 435 aa4.04□□□□□ -1.76
SRRM1-211ENST00000478890 ARTNQ5T4W7 220 aa4.04□□□□□ -1.76
SRRM1-211ENST00000478890 RC3H1Q5TC82 1133 aaKnown RBP4.04□□□□□ -1.76
SRRM1-211ENST00000478890 PURBQ96QR8 312 aaKnown RBP4.04□□□□□ -1.76
SRRM1-211ENST00000478890 WASF2Q9Y6W5 498 aa4.04□□□□□ -1.76
SRRM1-211ENST00000478890 DPYSL4O14531 572 aa4.03□□□□□ -1.76
SRRM1-211ENST00000478890 LYPD4Q6UWN0 246 aa4.02□□□□□ -1.77
SRRM1-211ENST00000478890 NANOS1Q8WY41 292 aaKnown RBP4.02□□□□□ -1.77
SRRM1-211ENST00000478890 WNT7BP56706 349 aa4.01□□□□□ -1.77
SRRM1-211ENST00000478890 ALYREFQ86V81 257 aaKnown RBP4.01□□□□□ -1.77
SRRM1-211ENST00000478890 SEMA6BQ9H3T3 888 aa4.01□□□□□ -1.77
SRRM1-211ENST00000478890 E2F4Q16254 413 aa4□□□□□ -1.77
SRRM1-211ENST00000478890 TTC13Q8NBP0 860 aa4□□□□□ -1.77
SRRM1-211ENST00000478890 KRBA1A5PL33 1030 aa3.99□□□□□ -1.77
SRRM1-211ENST00000478890 PAX4O43316 350 aa3.99□□□□□ -1.77
SRRM1-211ENST00000478890 ADAMTS2O95450 1211 aa3.99□□□□□ -1.77
SRRM1-211ENST00000478890 CELA2BP08218 269 aaPredicted RBP3.99□□□□□ -1.77
SRRM1-211ENST00000478890 EYA1Q99502 592 aa3.99□□□□□ -1.77
SRRM1-211ENST00000478890 CAMK2BQ13554 666 aa3.98□□□□□ -1.77
SRRM1-211ENST00000478890 FAM160A2Q8N612 972 aaPredicted RBP3.98□□□□□ -1.77
SRRM1-211ENST00000478890 FMNL1O95466 1100 aaPredicted RBP3.97□□□□□ -1.77
SRRM1-211ENST00000478890 DNAJB2P25686 324 aa3.97□□□□□ -1.77
SRRM1-211ENST00000478890 THAP11Q96EK4 314 aa3.97□□□□□ -1.77
SRRM1-211ENST00000478890 GRXCR2A6NFK2 248 aa3.96□□□□□ -1.78
SRRM1-211ENST00000478890 SKOR1P84550 965 aa3.96□□□□□ -1.78
SRRM1-211ENST00000478890 SRSF11Q05519 484 aaKnown RBP3.96□□□□□ -1.78
SRRM1-211ENST00000478890 PDIA6Q15084 440 aa3.96□□□□□ -1.78
SRRM1-211ENST00000478890 PUS10Q3MIT2 529 aaKnown RBP3.96□□□□□ -1.78
SRRM1-211ENST00000478890 MCTP1Q6DN14 999 aa3.96□□□□□ -1.78
SRRM1-211ENST00000478890 PRDM9Q9NQV7 894 aa3.96□□□□□ -1.78
SRRM1-211ENST00000478890 SPDYE16A6NNV3 312 aaPredicted RBP3.95□□□□□ -1.78
SRRM1-211ENST00000478890 SIAH2O43255 324 aa3.95□□□□□ -1.78
SRRM1-211ENST00000478890 FOXD4L6Q3SYB3 417 aaPredicted RBP3.95□□□□□ -1.78
SRRM1-211ENST00000478890 FOXD4L3Q6VB84 417 aaPredicted RBP3.95□□□□□ -1.78
SRRM1-211ENST00000478890 TMEM134Q9H6X4 195 aa3.95□□□□□ -1.78
SRRM1-211ENST00000478890 MSS51Q4VC12 460 aa3.94□□□□□ -1.78
SRRM1-211ENST00000478890 PADI6Q6TGC4 694 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms