RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 FUT2Q10981 343 aa10.93□□□□□ -0.66
SSR3-207ENST00000478842 ERCC6Q03468 1493 aa10.93□□□□□ -0.66
SSR3-207ENST00000478842 ACTN4O43707 911 aaKnown RBP10.91□□□□□ -0.66
SSR3-207ENST00000478842 HRCP23327 699 aa10.91□□□□□ -0.66
SSR3-207ENST00000478842 MTMR2Q13614 643 aa10.91□□□□□ -0.66
SSR3-207ENST00000478842 RTL5Q5HYW3 569 aaPredicted RBP10.9□□□□□ -0.66
SSR3-207ENST00000478842 FBXO31Q5XUX0 539 aaPredicted RBP10.9□□□□□ -0.66
SSR3-207ENST00000478842 CABLES1Q8TDN4 633 aa10.9□□□□□ -0.66
SSR3-207ENST00000478842 PCDHGC3Q9UN70 934 aa10.9□□□□□ -0.66
SSR3-207ENST00000478842 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
SSR3-207ENST00000478842 SOWAHBA6NEL2 793 aa10.89□□□□□ -0.67
SSR3-207ENST00000478842 PPP4CP60510 307 aa10.89□□□□□ -0.67
SSR3-207ENST00000478842 PRM3Q9NNZ6 103 aa10.89□□□□□ -0.67
SSR3-207ENST00000478842 AP1G2O75843 785 aa10.88□□□□□ -0.67
SSR3-207ENST00000478842 CLUAP1Q96AJ1 413 aa10.88□□□□□ -0.67
SSR3-207ENST00000478842 SNRKQ9NRH2 765 aa10.88□□□□□ -0.67
SSR3-207ENST00000478842 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
SSR3-207ENST00000478842 Q3C1V9 767 aa10.87□□□□□ -0.67
SSR3-207ENST00000478842 HELBQ8NG08 1087 aaPredicted RBP10.87□□□□□ -0.67
SSR3-207ENST00000478842 WNT2BQ93097 391 aa10.87□□□□□ -0.67
SSR3-207ENST00000478842 HLA-CQ95604 372 aa10.87□□□□□ -0.67
SSR3-207ENST00000478842 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
SSR3-207ENST00000478842 C6orf229H3BNL8 230 aa10.86□□□□□ -0.67
SSR3-207ENST00000478842 ARXQ96QS3 562 aa10.86□□□□□ -0.67
SSR3-207ENST00000478842 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
SSR3-207ENST00000478842 TRAK2O60296 914 aa10.85□□□□□ -0.67
SSR3-207ENST00000478842 MORN1Q5T089 497 aa10.85□□□□□ -0.67
SSR3-207ENST00000478842 PROSER2Q86WR7 435 aaPredicted RBP10.85□□□□□ -0.67
SSR3-207ENST00000478842 MTMR14Q8NCE2 650 aa10.85□□□□□ -0.67
SSR3-207ENST00000478842 USP17L8P0C7I0 530 aa10.84□□□□□ -0.67
SSR3-207ENST00000478842 WWC1Q8IX03 1113 aa10.83□□□□□ -0.68
SSR3-207ENST00000478842 COG6Q9Y2V7 657 aa10.83□□□□□ -0.68
SSR3-207ENST00000478842 BCAMP50895 628 aa10.82□□□□□ -0.68
SSR3-207ENST00000478842 RETREG3Q86VR2 466 aa10.82□□□□□ -0.68
SSR3-207ENST00000478842 POM121Q96HA1 1249 aa10.81□□□□□ -0.68
SSR3-207ENST00000478842 SLC27A5Q9Y2P5 690 aa10.81□□□□□ -0.68
SSR3-207ENST00000478842 SALL2Q9Y467 1007 aaPredicted RBP10.81□□□□□ -0.68
SSR3-207ENST00000478842 PUS10Q3MIT2 529 aaKnown RBP10.8□□□□□ -0.68
SSR3-207ENST00000478842 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
SSR3-207ENST00000478842 KRTAP3-2Q9BYR7 98 aa10.8□□□□□ -0.68
SSR3-207ENST00000478842 CFAP99D6REC4 459 aa10.79□□□□□ -0.68
SSR3-207ENST00000478842 NR1I2O75469 434 aa10.79□□□□□ -0.68
SSR3-207ENST00000478842 APLP1P51693 650 aa10.79□□□□□ -0.68
SSR3-207ENST00000478842 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
SSR3-207ENST00000478842 PRR7Q8TB68 274 aa10.79□□□□□ -0.68
SSR3-207ENST00000478842 TSC1Q92574 1164 aa10.79□□□□□ -0.68
SSR3-207ENST00000478842 PCDHB3Q9Y5E6 796 aa10.79□□□□□ -0.68
SSR3-207ENST00000478842 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
SSR3-207ENST00000478842 CTDSPL2Q05D32 466 aa10.78□□□□□ -0.68
SSR3-207ENST00000478842 DESI1Q6ICB0 168 aa10.78□□□□□ -0.68
SSR3-207ENST00000478842 NYAP1Q6ZVC0 841 aa10.78□□□□□ -0.68
SSR3-207ENST00000478842 ATAD2BQ9ULI0 1458 aa10.78□□□□□ -0.68
SSR3-207ENST00000478842 NDUFB9Q9Y6M9 179 aa10.77□□□□□ -0.69
SSR3-207ENST00000478842 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
SSR3-207ENST00000478842 THSD4Q6ZMP0 1018 aa10.76□□□□□ -0.69
SSR3-207ENST00000478842 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
SSR3-207ENST00000478842 GDPD2Q9HCC8 539 aa10.76□□□□□ -0.69
SSR3-207ENST00000478842 SCUBE3Q8IX30 993 aa10.75□□□□□ -0.69
SSR3-207ENST00000478842 WBP1LQ9NX94 342 aa10.75□□□□□ -0.69
SSR3-207ENST00000478842 THOC2Q8NI27 1593 aaKnown RBP10.74□□□□□ -0.69
SSR3-207ENST00000478842 NESP48681 1621 aa10.74□□□□□ -0.69
SSR3-207ENST00000478842 FMNL1O95466 1100 aaPredicted RBP10.74□□□□□ -0.69
SSR3-207ENST00000478842 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
SSR3-207ENST00000478842 GJD4Q96KN9 370 aaPredicted RBP10.74□□□□□ -0.69
SSR3-207ENST00000478842 USB1Q9BQ65 265 aaKnown RBP10.74□□□□□ -0.69
SSR3-207ENST00000478842 ARID3CA6NKF2 412 aa10.73□□□□□ -0.69
SSR3-207ENST00000478842 HOMEZQ8IX15 550 aa10.73□□□□□ -0.69
SSR3-207ENST00000478842 C1orf115Q9H7X2 142 aa10.73□□□□□ -0.69
SSR3-207ENST00000478842 TBC1D2BQ9UPU7 963 aa10.73□□□□□ -0.69
SSR3-207ENST00000478842 ZNF330Q9Y3S2 320 aaPredicted RBP10.73□□□□□ -0.69
SSR3-207ENST00000478842 ABL2P42684 1182 aa10.72□□□□□ -0.69
SSR3-207ENST00000478842 BLOC1S3Q6QNY0 202 aa10.72□□□□□ -0.69
SSR3-207ENST00000478842 RNF19BQ6ZMZ0 732 aa10.71□□□□□ -0.69
SSR3-207ENST00000478842 LRRN4Q8WUT4 740 aa10.71□□□□□ -0.69
SSR3-207ENST00000478842 KCTD12Q96CX2 325 aaKnown RBP10.71□□□□□ -0.69
SSR3-207ENST00000478842 HMX1Q9NP08 348 aaPredicted RBP10.71□□□□□ -0.69
SSR3-207ENST00000478842 SMARCA4P51532 1647 aa10.7□□□□□ -0.7
SSR3-207ENST00000478842 LAMC3Q9Y6N6 1575 aa10.7□□□□□ -0.7
SSR3-207ENST00000478842 LYPD8Q6UX82 237 aa10.7□□□□□ -0.7
SSR3-207ENST00000478842 CDAN1Q8IWY9 1227 aa10.7□□□□□ -0.7
SSR3-207ENST00000478842 PNMA1Q8ND90 353 aa10.7□□□□□ -0.7
SSR3-207ENST00000478842 THAP11Q96EK4 314 aa10.7□□□□□ -0.7
SSR3-207ENST00000478842 TRIM34Q9BYJ4 488 aa10.7□□□□□ -0.7
SSR3-207ENST00000478842 ZNF777Q9ULD5 760 aaPredicted RBP10.7□□□□□ -0.7
SSR3-207ENST00000478842 WASHC4Q2M389 1173 aa10.68□□□□□ -0.7
SSR3-207ENST00000478842 POTEGQ6S5H5 508 aa10.68□□□□□ -0.7
SSR3-207ENST00000478842 PER1O15534 1290 aaPredicted RBP10.67□□□□□ -0.7
SSR3-207ENST00000478842 MSS51Q4VC12 460 aa10.66□□□□□ -0.7
SSR3-207ENST00000478842 SPSB2Q99619 263 aa10.66□□□□□ -0.7
SSR3-207ENST00000478842 SERPINA10Q9UK55 444 aa10.66□□□□□ -0.7
SSR3-207ENST00000478842 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
SSR3-207ENST00000478842 POTEMA6NI47 508 aa10.65□□□□□ -0.7
SSR3-207ENST00000478842 JUNDP17535 347 aa10.65□□□□□ -0.7
SSR3-207ENST00000478842 CCDC97Q96F63 343 aaPredicted RBP10.65□□□□□ -0.7
SSR3-207ENST00000478842 ARID3AQ99856 593 aa10.65□□□□□ -0.7
SSR3-207ENST00000478842 PEG3Q9GZU2 1588 aa10.65□□□□□ -0.71
SSR3-207ENST00000478842 KIF21AQ7Z4S6 1674 aa10.64□□□□□ -0.71
SSR3-207ENST00000478842 COPS2P61201 443 aa10.64□□□□□ -0.71
SSR3-207ENST00000478842 PTPRNQ16849 979 aa10.64□□□□□ -0.71
SSR3-207ENST00000478842 CCDC82Q8N4S0 544 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms