RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 DCCP43146 1447 aa9.89□□□□□ -0.83
BRCA1-215ENST00000478531 DLC1Q96QB1 1528 aa9.89□□□□□ -0.83
BRCA1-215ENST00000478531 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
BRCA1-215ENST00000478531 CDC42BPGQ6DT37 1551 aa9.89□□□□□ -0.83
BRCA1-215ENST00000478531 CADPS2Q86UW7 1296 aa9.88□□□□□ -0.83
BRCA1-215ENST00000478531 PRAM1Q96QH2 718 aa9.88□□□□□ -0.83
BRCA1-215ENST00000478531 FAM135BQ49AJ0 1406 aa9.88□□□□□ -0.83
BRCA1-215ENST00000478531 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
BRCA1-215ENST00000478531 CLSPNQ9HAW4 1339 aa9.88□□□□□ -0.83
BRCA1-215ENST00000478531 POGKQ9P215 609 aa9.88□□□□□ -0.83
BRCA1-215ENST00000478531 SLAIN2Q9P270 581 aa9.88□□□□□ -0.83
BRCA1-215ENST00000478531 PHLPP1O60346 1717 aa9.87□□□□□ -0.83
BRCA1-215ENST00000478531 FMN2Q9NZ56 1722 aa9.87□□□□□ -0.83
BRCA1-215ENST00000478531 QRICH2Q9H0J4 1663 aa9.87□□□□□ -0.83
BRCA1-215ENST00000478531 MST1RQ04912 1400 aa9.87□□□□□ -0.83
BRCA1-215ENST00000478531 NBPF8Q3BBV2 869 aa9.86□□□□□ -0.83
BRCA1-215ENST00000478531 RGPD8O14715 1765 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-215ENST00000478531 HSPA1LP34931 641 aa9.86□□□□□ -0.83
BRCA1-215ENST00000478531 HIRIP3Q9BW71 556 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-215ENST00000478531 ADGRB2O60241 1585 aa9.85□□□□□ -0.83
BRCA1-215ENST00000478531 RALGAPBQ86X10 1494 aa9.85□□□□□ -0.83
BRCA1-215ENST00000478531 MINK1Q8N4C8 1332 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-215ENST00000478531 NUTM2FA1L443 756 aa9.84□□□□□ -0.83
BRCA1-215ENST00000478531 C1orf167Q5SNV9 1468 aa9.84□□□□□ -0.83
BRCA1-215ENST00000478531 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
BRCA1-215ENST00000478531 NHSL1Q5SYE7 1610 aa9.83□□□□□ -0.84
BRCA1-215ENST00000478531 BRINP3Q76B58 766 aa9.83□□□□□ -0.84
BRCA1-215ENST00000478531 COL16A1Q07092 1604 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-215ENST00000478531 AHDC1Q5TGY3 1603 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-215ENST00000478531 USP32Q8NFA0 1604 aa9.82□□□□□ -0.84
BRCA1-215ENST00000478531 CARD11Q9BXL7 1154 aa9.81□□□□□ -0.84
BRCA1-215ENST00000478531 EIF3AQ14152 1382 aaKnown RBP9.81□□□□□ -0.84
BRCA1-215ENST00000478531 CENPJQ9HC77 1338 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-215ENST00000478531 ORAI2Q96SN7 254 aa9.81□□□□□ -0.84
BRCA1-215ENST00000478531 ITSN1Q15811 1721 aa9.81□□□□□ -0.84
BRCA1-215ENST00000478531 GPRASP1Q5JY77 1395 aa9.81□□□□□ -0.84
BRCA1-215ENST00000478531 KIF1AQ12756 1690 aa9.8□□□□□ -0.84
BRCA1-215ENST00000478531 ESCO1Q5FWF5 840 aa9.8□□□□□ -0.84
BRCA1-215ENST00000478531 DDX17Q92841 729 aaKnown RBP9.8□□□□□ -0.84
BRCA1-215ENST00000478531 TULP4Q9NRJ4 1543 aa9.8□□□□□ -0.84
BRCA1-215ENST00000478531 MSH5O43196 834 aa9.79□□□□□ -0.84
BRCA1-215ENST00000478531 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
BRCA1-215ENST00000478531 WASLO00401 505 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-215ENST00000478531 TOPAZ1Q8N9V7 1692 aa9.78□□□□□ -0.84
BRCA1-215ENST00000478531 ANKARQ7Z5J8 1434 aa9.77□□□□□ -0.84
BRCA1-215ENST00000478531 ATP7BP35670 1465 aa9.77□□□□□ -0.85
BRCA1-215ENST00000478531 SHPRHQ149N8 1683 aa9.76□□□□□ -0.85
BRCA1-215ENST00000478531 XPCQ01831 940 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-215ENST00000478531 CDK19Q9BWU1 502 aa9.76□□□□□ -0.85
BRCA1-215ENST00000478531 PRR36Q9H6K5 1346 aa9.76□□□□□ -0.85
BRCA1-215ENST00000478531 FOXO3O43524 673 aa9.75□□□□□ -0.85
BRCA1-215ENST00000478531 SRPK2P78362 688 aaKnown RBP9.75□□□□□ -0.85
BRCA1-215ENST00000478531 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
BRCA1-215ENST00000478531 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-215ENST00000478531 USP47Q96K76 1375 aa9.75□□□□□ -0.85
BRCA1-215ENST00000478531 PXDNQ92626 1479 aa9.75□□□□□ -0.85
BRCA1-215ENST00000478531 PHF8Q9UPP1 1060 aa9.75□□□□□ -0.85
BRCA1-215ENST00000478531 NPHP3Q7Z494 1330 aa9.75□□□□□ -0.85
BRCA1-215ENST00000478531 CABP2Q9NPB3 220 aa9.74□□□□□ -0.85
BRCA1-215ENST00000478531 EVC2Q86UK5 1308 aa9.74□□□□□ -0.85
BRCA1-215ENST00000478531 JCADQ9P266 1359 aa9.74□□□□□ -0.85
BRCA1-215ENST00000478531 NUDT16Q96DE0 195 aaKnown RBP9.74□□□□□ -0.85
BRCA1-215ENST00000478531 ST20-MTHFSA0A0A6YYL1 179 aa9.72□□□□□ -0.85
BRCA1-215ENST00000478531 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-215ENST00000478531 SBNO2Q9Y2G9 1366 aa9.72□□□□□ -0.85
BRCA1-215ENST00000478531 PPIP5K1Q6PFW1 1433 aa9.72□□□□□ -0.85
BRCA1-215ENST00000478531 TRPM3Q9HCF6 1732 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-215ENST00000478531 NGDNQ8NEJ9 315 aaKnown RBP9.72□□□□□ -0.85
BRCA1-215ENST00000478531 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
BRCA1-215ENST00000478531 PNPLA6Q8IY17 1366 aa9.71□□□□□ -0.86
BRCA1-215ENST00000478531 PSME1Q06323 249 aa9.71□□□□□ -0.86
BRCA1-215ENST00000478531 COL22A1Q8NFW1 1626 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-215ENST00000478531 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-215ENST00000478531 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-215ENST00000478531 KRT28Q7Z3Y7 464 aa9.7□□□□□ -0.86
BRCA1-215ENST00000478531 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-215ENST00000478531 LRP6O75581 1613 aa9.7□□□□□ -0.86
BRCA1-215ENST00000478531 TNS3Q68CZ2 1445 aa9.7□□□□□ -0.86
BRCA1-215ENST00000478531 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
BRCA1-215ENST00000478531 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
BRCA1-215ENST00000478531 CCDC61Q9Y6R9 512 aa9.7□□□□□ -0.86
BRCA1-215ENST00000478531 AKAP12Q02952 1782 aa9.7□□□□□ -0.86
BRCA1-215ENST00000478531 ALS2Q96Q42 1657 aa9.7□□□□□ -0.86
BRCA1-215ENST00000478531 DISP3Q9P2K9 1392 aa9.69□□□□□ -0.86
BRCA1-215ENST00000478531 ABCA3Q99758 1704 aa9.69□□□□□ -0.86
BRCA1-215ENST00000478531 TESK2Q96S53 571 aa9.69□□□□□ -0.86
BRCA1-215ENST00000478531 ATAD2Q6PL18 1390 aa9.69□□□□□ -0.86
BRCA1-215ENST00000478531 ACEP12821 1306 aa9.68□□□□□ -0.86
BRCA1-215ENST00000478531 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-215ENST00000478531 POLR3AO14802 1390 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-215ENST00000478531 SPATA31A6Q5VVP1 1343 aa9.68□□□□□ -0.86
BRCA1-215ENST00000478531 MEX3CQ5U5Q3 659 aaKnown RBP9.68□□□□□ -0.86
BRCA1-215ENST00000478531 CABP1Q9NZU7 370 aa9.68□□□□□ -0.86
BRCA1-215ENST00000478531 MARF1Q9Y4F3 1742 aaKnown RBP9.68□□□□□ -0.86
BRCA1-215ENST00000478531 SPATA31A3Q5VYP0 1347 aa9.67□□□□□ -0.86
BRCA1-215ENST00000478531 SBNO1A3KN83 1393 aa9.67□□□□□ -0.86
BRCA1-215ENST00000478531 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
BRCA1-215ENST00000478531 TMC1Q8TDI8 760 aa9.66□□□□□ -0.86
BRCA1-215ENST00000478531 MON2Q7Z3U7 1717 aa9.66□□□□□ -0.86
BRCA1-215ENST00000478531 HSPA5P11021 654 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms