RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 MPHOSPH9Q99550 1183 aa19.41■□□□□ 0.7
ABCF3-212ENST00000478288 ADGRF5Q8IZF2 1346 aa19.4■□□□□ 0.7
ABCF3-212ENST00000478288 LRPPRCP42704 1394 aaKnown RBP19.4■□□□□ 0.7
ABCF3-212ENST00000478288 ORAI2Q96SN7 254 aa19.39■□□□□ 0.69
ABCF3-212ENST00000478288 ABCC11Q96J66 1382 aa19.39■□□□□ 0.69
ABCF3-212ENST00000478288 NPHP3Q7Z494 1330 aa19.37■□□□□ 0.69
ABCF3-212ENST00000478288 UPF1Q92900 1129 aaKnown RBP eCLIP19.37■□□□□ 0.69
ABCF3-212ENST00000478288 C8orf37Q96NL8 207 aa19.37■□□□□ 0.69
ABCF3-212ENST00000478288 PXDNQ92626 1479 aa19.36■□□□□ 0.69
ABCF3-212ENST00000478288 NRXN1Q9ULB1 1477 aa19.35■□□□□ 0.69
ABCF3-212ENST00000478288 RBM6P78332 1123 aaKnown RBP19.35■□□□□ 0.69
ABCF3-212ENST00000478288 MYOM2P54296 1465 aa19.35■□□□□ 0.69
ABCF3-212ENST00000478288 RGL3Q3MIN7 710 aa19.34■□□□□ 0.69
ABCF3-212ENST00000478288 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
ABCF3-212ENST00000478288 MARF1Q9Y4F3 1742 aaKnown RBP19.34■□□□□ 0.69
ABCF3-212ENST00000478288 RGS12O14924 1447 aa19.34■□□□□ 0.69
ABCF3-212ENST00000478288 KIF1AQ12756 1690 aa19.33■□□□□ 0.69
ABCF3-212ENST00000478288 QTRT2Q9H974 415 aaKnown RBP19.33■□□□□ 0.68
ABCF3-212ENST00000478288 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.68
ABCF3-212ENST00000478288 EP400Q96L91 3159 aa19.32■□□□□ 0.68
ABCF3-212ENST00000478288 ESCO1Q5FWF5 840 aa19.31■□□□□ 0.68
ABCF3-212ENST00000478288 FNBP4Q8N3X1 1017 aaPredicted RBP19.31■□□□□ 0.68
ABCF3-212ENST00000478288 SIRT1Q96EB6 747 aa19.31■□□□□ 0.68
ABCF3-212ENST00000478288 NGLY1Q96IV0 654 aa19.31■□□□□ 0.68
ABCF3-212ENST00000478288 ADAMTS2O95450 1211 aa19.3■□□□□ 0.68
ABCF3-212ENST00000478288 WAPLQ7Z5K2 1190 aa19.29■□□□□ 0.68
ABCF3-212ENST00000478288 STK26Q9P289 416 aa19.29■□□□□ 0.68
ABCF3-212ENST00000478288 C14orf93Q9H972 538 aaKnown RBP19.28■□□□□ 0.68
ABCF3-212ENST00000478288 PLEKHH1Q9ULM0 1364 aa19.28■□□□□ 0.68
ABCF3-212ENST00000478288 TMEM132EQ6IEE7 984 aa19.27■□□□□ 0.68
ABCF3-212ENST00000478288 USP21Q9UK80 565 aa19.27■□□□□ 0.68
ABCF3-212ENST00000478288 TRPC5Q9UL62 973 aaPredicted RBP19.27■□□□□ 0.68
ABCF3-212ENST00000478288 ATRNO75882 1429 aa19.26■□□□□ 0.67
ABCF3-212ENST00000478288 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.26■□□□□ 0.67
ABCF3-212ENST00000478288 FOXO3O43524 673 aa19.26■□□□□ 0.67
ABCF3-212ENST00000478288 SRCAPQ6ZRS2 3230 aa19.25■□□□□ 0.67
ABCF3-212ENST00000478288 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
ABCF3-212ENST00000478288 DHX57Q6P158 1386 aaKnown RBP19.24■□□□□ 0.67
ABCF3-212ENST00000478288 RAB3GAP2Q9H2M9 1393 aa19.23■□□□□ 0.67
ABCF3-212ENST00000478288 RGPD8O14715 1765 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-212ENST00000478288 BCL9LQ86UU0 1499 aa19.22■□□□□ 0.67
ABCF3-212ENST00000478288 ADGRB2O60241 1585 aa19.22■□□□□ 0.67
ABCF3-212ENST00000478288 ATAD2Q6PL18 1390 aa19.21■□□□□ 0.67
ABCF3-212ENST00000478288 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
ABCF3-212ENST00000478288 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
ABCF3-212ENST00000478288 USP32Q8NFA0 1604 aa19.19■□□□□ 0.66
ABCF3-212ENST00000478288 NUTM2FA1L443 756 aa19.19■□□□□ 0.66
ABCF3-212ENST00000478288 XPCQ01831 940 aaPredicted RBP19.19■□□□□ 0.66
ABCF3-212ENST00000478288 CFAP70Q5T0N1 1121 aa19.19■□□□□ 0.66
ABCF3-212ENST00000478288 TNS3Q68CZ2 1445 aa19.18■□□□□ 0.66
ABCF3-212ENST00000478288 ANKARQ7Z5J8 1434 aa19.18■□□□□ 0.66
ABCF3-212ENST00000478288 SLIT2O94813 1529 aa19.18■□□□□ 0.66
ABCF3-212ENST00000478288 STAC3Q96MF2 364 aa19.16■□□□□ 0.66
ABCF3-212ENST00000478288 SBNO1A3KN83 1393 aa19.16■□□□□ 0.66
ABCF3-212ENST00000478288 ABCA3Q99758 1704 aa19.15■□□□□ 0.66
ABCF3-212ENST00000478288 NWD2Q9ULI1 1742 aa19.15■□□□□ 0.66
ABCF3-212ENST00000478288 HRCP23327 699 aa19.15■□□□□ 0.66
ABCF3-212ENST00000478288 KRT28Q7Z3Y7 464 aa19.15■□□□□ 0.66
ABCF3-212ENST00000478288 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
ABCF3-212ENST00000478288 PHF8Q9UPP1 1060 aa19.15■□□□□ 0.66
ABCF3-212ENST00000478288 PSME1Q06323 249 aa19.14■□□□□ 0.65
ABCF3-212ENST00000478288 GJD4Q96KN9 370 aaPredicted RBP19.13■□□□□ 0.65
ABCF3-212ENST00000478288 ARHGEF10O15013 1369 aa19.13■□□□□ 0.65
ABCF3-212ENST00000478288 EIF3AQ14152 1382 aaKnown RBP19.12■□□□□ 0.65
ABCF3-212ENST00000478288 UNC5CLQ8IV45 518 aa19.12■□□□□ 0.65
ABCF3-212ENST00000478288 GLI3P10071 1580 aa19.11■□□□□ 0.65
ABCF3-212ENST00000478288 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
ABCF3-212ENST00000478288 RALGAPBQ86X10 1494 aa19.1■□□□□ 0.65
ABCF3-212ENST00000478288 POGKQ9P215 609 aa19.1■□□□□ 0.65
ABCF3-212ENST00000478288 TRPM3Q9HCF6 1732 aaPredicted RBP19.1■□□□□ 0.65
ABCF3-212ENST00000478288 TULP4Q9NRJ4 1543 aa19.1■□□□□ 0.65
ABCF3-212ENST00000478288 CCDC125Q86Z20 511 aa19.09■□□□□ 0.65
ABCF3-212ENST00000478288 ALS2Q96Q42 1657 aa19.08■□□□□ 0.64
ABCF3-212ENST00000478288 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
ABCF3-212ENST00000478288 ARHGEF28Q8N1W1 1705 aaKnown RBP19.07■□□□□ 0.64
ABCF3-212ENST00000478288 BRWD3Q6RI45 1802 aa19.06■□□□□ 0.64
ABCF3-212ENST00000478288 ITSN1Q15811 1721 aa19.05■□□□□ 0.64
ABCF3-212ENST00000478288 DCAF11Q8TEB1 546 aa19.05■□□□□ 0.64
ABCF3-212ENST00000478288 TRAK1Q9UPV9 953 aa19.05■□□□□ 0.64
ABCF3-212ENST00000478288 HAP1P54257 671 aaPredicted RBP19.04■□□□□ 0.64
ABCF3-212ENST00000478288 VPS72Q15906 364 aa19.04■□□□□ 0.64
ABCF3-212ENST00000478288 KIAA1210Q9ULL0 1709 aa19.03■□□□□ 0.64
ABCF3-212ENST00000478288 GPRASP1Q5JY77 1395 aa19.03■□□□□ 0.64
ABCF3-212ENST00000478288 NRAPQ86VF7 1730 aa19.03■□□□□ 0.64
ABCF3-212ENST00000478288 CRYBG1Q9Y4K1 1723 aa19.03■□□□□ 0.64
ABCF3-212ENST00000478288 WASLO00401 505 aaPredicted RBP19.02■□□□□ 0.64
ABCF3-212ENST00000478288 PMFBP1Q8TBY8 1022 aa19.02■□□□□ 0.64
ABCF3-212ENST00000478288 PRR36Q9H6K5 1346 aa19.01■□□□□ 0.63
ABCF3-212ENST00000478288 COL14A1Q05707 1796 aaKnown RBP19.01■□□□□ 0.63
ABCF3-212ENST00000478288 ONECUT3O60422 494 aaPredicted RBP19.01■□□□□ 0.63
ABCF3-212ENST00000478288 CABLES1Q8TDN4 633 aa19.01■□□□□ 0.63
ABCF3-212ENST00000478288 KDM2AQ9Y2K7 1162 aa19.01■□□□□ 0.63
ABCF3-212ENST00000478288 BLMP54132 1417 aaPredicted RBP19■□□□□ 0.63
ABCF3-212ENST00000478288 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
ABCF3-212ENST00000478288 MINK1Q8N4C8 1332 aaPredicted RBP19■□□□□ 0.63
ABCF3-212ENST00000478288 ATP7BP35670 1465 aa18.99■□□□□ 0.63
ABCF3-212ENST00000478288 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
ABCF3-212ENST00000478288 FAM83GA6ND36 823 aa18.97■□□□□ 0.63
ABCF3-212ENST00000478288 TOPAZ1Q8N9V7 1692 aa18.96■□□□□ 0.63
ABCF3-212ENST00000478288 SEPT12Q8IYM1 358 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms