RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 TRPC5Q9UL62 973 aaPredicted RBP14.55□□□□□ -0.08
CCM2-210ENST00000478169 FOXD1Q16676 465 aa14.54□□□□□ -0.08
CCM2-210ENST00000478169 CDC42BPGQ6DT37 1551 aa14.54□□□□□ -0.08
CCM2-210ENST00000478169 MARF1Q9Y4F3 1742 aaKnown RBP14.53□□□□□ -0.08
CCM2-210ENST00000478169 NPHP3Q7Z494 1330 aa14.53□□□□□ -0.08
CCM2-210ENST00000478169 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.08
CCM2-210ENST00000478169 ESCO1Q5FWF5 840 aa14.52□□□□□ -0.09
CCM2-210ENST00000478169 ATRNO75882 1429 aa14.51□□□□□ -0.09
CCM2-210ENST00000478169 MYOM2P54296 1465 aa14.5□□□□□ -0.09
CCM2-210ENST00000478169 PXDNQ92626 1479 aa14.5□□□□□ -0.09
CCM2-210ENST00000478169 TECPR2O15040 1411 aa14.49□□□□□ -0.09
CCM2-210ENST00000478169 LRPPRCP42704 1394 aaKnown RBP14.49□□□□□ -0.09
CCM2-210ENST00000478169 IFT172Q9UG01 1749 aa14.49□□□□□ -0.09
CCM2-210ENST00000478169 ANKRD30BQ9BXX2 1392 aa14.48□□□□□ -0.09
CCM2-210ENST00000478169 ADGRF5Q8IZF2 1346 aa14.48□□□□□ -0.09
CCM2-210ENST00000478169 FOXO3O43524 673 aa14.48□□□□□ -0.09
CCM2-210ENST00000478169 KNDC1Q76NI1 1749 aa14.48□□□□□ -0.09
CCM2-210ENST00000478169 CCDC144AA2RUR9 1427 aa14.48□□□□□ -0.09
CCM2-210ENST00000478169 ABCC11Q96J66 1382 aa14.47□□□□□ -0.09
CCM2-210ENST00000478169 BCL9LQ86UU0 1499 aa14.47□□□□□ -0.09
CCM2-210ENST00000478169 SPATA31E1Q6ZUB1 1445 aa14.47□□□□□ -0.09
CCM2-210ENST00000478169 WAPLQ7Z5K2 1190 aa14.46□□□□□ -0.09
CCM2-210ENST00000478169 CCDC125Q86Z20 511 aa14.46□□□□□ -0.09
CCM2-210ENST00000478169 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.46□□□□□ -0.1
CCM2-210ENST00000478169 RGL3Q3MIN7 710 aa14.45□□□□□ -0.1
CCM2-210ENST00000478169 STK26Q9P289 416 aa14.45□□□□□ -0.1
CCM2-210ENST00000478169 FMN2Q9NZ56 1722 aa14.44□□□□□ -0.1
CCM2-210ENST00000478169 XPCQ01831 940 aaPredicted RBP14.44□□□□□ -0.1
CCM2-210ENST00000478169 GJD4Q96KN9 370 aaPredicted RBP14.44□□□□□ -0.1
CCM2-210ENST00000478169 KIF1AQ12756 1690 aa14.44□□□□□ -0.1
CCM2-210ENST00000478169 SIRT1Q96EB6 747 aa14.43□□□□□ -0.1
CCM2-210ENST00000478169 PIK3C2GO75747 1445 aa14.42□□□□□ -0.1
CCM2-210ENST00000478169 EP400Q96L91 3159 aa14.42□□□□□ -0.1
CCM2-210ENST00000478169 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
CCM2-210ENST00000478169 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
CCM2-210ENST00000478169 MPHOSPH9Q99550 1183 aa14.42□□□□□ -0.1
CCM2-210ENST00000478169 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
CCM2-210ENST00000478169 RGPD8O14715 1765 aaPredicted RBP14.42□□□□□ -0.1
CCM2-210ENST00000478169 SPATA31A3Q5VYP0 1347 aa14.41□□□□□ -0.1
CCM2-210ENST00000478169 YTHDC2Q9H6S0 1430 aaKnown RBP14.41□□□□□ -0.1
CCM2-210ENST00000478169 UNC5CLQ8IV45 518 aa14.41□□□□□ -0.1
CCM2-210ENST00000478169 PLEKHH1Q9ULM0 1364 aa14.41□□□□□ -0.1
CCM2-210ENST00000478169 SLIT2O94813 1529 aa14.41□□□□□ -0.1
CCM2-210ENST00000478169 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
CCM2-210ENST00000478169 KRT28Q7Z3Y7 464 aa14.39□□□□□ -0.11
CCM2-210ENST00000478169 USP32Q8NFA0 1604 aa14.39□□□□□ -0.11
CCM2-210ENST00000478169 PSME1Q06323 249 aa14.38□□□□□ -0.11
CCM2-210ENST00000478169 C14orf93Q9H972 538 aaKnown RBP14.38□□□□□ -0.11
CCM2-210ENST00000478169 BRWD3Q6RI45 1802 aa14.38□□□□□ -0.11
CCM2-210ENST00000478169 GLI3P10071 1580 aa14.38□□□□□ -0.11
CCM2-210ENST00000478169 RALGAPBQ86X10 1494 aa14.38□□□□□ -0.11
CCM2-210ENST00000478169 SRCAPQ6ZRS2 3230 aa14.37□□□□□ -0.11
CCM2-210ENST00000478169 DHX57Q6P158 1386 aaKnown RBP14.36□□□□□ -0.11
CCM2-210ENST00000478169 NWD2Q9ULI1 1742 aa14.36□□□□□ -0.11
CCM2-210ENST00000478169 TNS3Q68CZ2 1445 aa14.36□□□□□ -0.11
CCM2-210ENST00000478169 PHF8Q9UPP1 1060 aa14.36□□□□□ -0.11
CCM2-210ENST00000478169 NRXN1Q9ULB1 1477 aa14.36□□□□□ -0.11
CCM2-210ENST00000478169 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
CCM2-210ENST00000478169 HAP1P54257 671 aaPredicted RBP14.35□□□□□ -0.11
CCM2-210ENST00000478169 SBNO1A3KN83 1393 aa14.34□□□□□ -0.11
CCM2-210ENST00000478169 VPS72Q15906 364 aa14.34□□□□□ -0.11
CCM2-210ENST00000478169 PLCH1Q4KWH8 1693 aa14.33□□□□□ -0.11
CCM2-210ENST00000478169 ONECUT3O60422 494 aaPredicted RBP14.33□□□□□ -0.12
CCM2-210ENST00000478169 CFAP70Q5T0N1 1121 aa14.33□□□□□ -0.12
CCM2-210ENST00000478169 ARHGEF10O15013 1369 aa14.33□□□□□ -0.12
CCM2-210ENST00000478169 ABCA3Q99758 1704 aa14.32□□□□□ -0.12
CCM2-210ENST00000478169 DLC1Q96QB1 1528 aa14.32□□□□□ -0.12
CCM2-210ENST00000478169 SEPT12Q8IYM1 358 aa14.32□□□□□ -0.12
CCM2-210ENST00000478169 CABLES1Q8TDN4 633 aa14.31□□□□□ -0.12
CCM2-210ENST00000478169 PRAM1Q96QH2 718 aa14.31□□□□□ -0.12
CCM2-210ENST00000478169 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
CCM2-210ENST00000478169 SF3B2Q13435 895 aaKnown RBP14.3□□□□□ -0.12
CCM2-210ENST00000478169 LMOD2Q6P5Q4 547 aa14.3□□□□□ -0.12
CCM2-210ENST00000478169 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.125e-8■■■□□ 18
CCM2-210ENST00000478169 POGKQ9P215 609 aa14.29□□□□□ -0.12
CCM2-210ENST00000478169 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
CCM2-210ENST00000478169 FAM83GA6ND36 823 aa14.28□□□□□ -0.12
CCM2-210ENST00000478169 KRT27Q7Z3Y8 459 aa14.28□□□□□ -0.12
CCM2-210ENST00000478169 CCDC9Q9Y3X0 531 aaKnown RBP14.28□□□□□ -0.12
CCM2-210ENST00000478169 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.12
CCM2-210ENST00000478169 DEFB132Q7Z7B7 95 aa14.27□□□□□ -0.13
CCM2-210ENST00000478169 PMFBP1Q8TBY8 1022 aa14.27□□□□□ -0.13
CCM2-210ENST00000478169 ADGRB1O14514 1584 aa14.26□□□□□ -0.13
CCM2-210ENST00000478169 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
CCM2-210ENST00000478169 NRAPQ86VF7 1730 aa14.26□□□□□ -0.13
CCM2-210ENST00000478169 ALS2Q96Q42 1657 aa14.26□□□□□ -0.13
CCM2-210ENST00000478169 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
CCM2-210ENST00000478169 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
CCM2-210ENST00000478169 COL14A1Q05707 1796 aaKnown RBP14.25□□□□□ -0.13
CCM2-210ENST00000478169 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
CCM2-210ENST00000478169 BTG4Q9NY30 223 aa14.23□□□□□ -0.13
CCM2-210ENST00000478169 TRAK1Q9UPV9 953 aa14.23□□□□□ -0.13
CCM2-210ENST00000478169 TULP4Q9NRJ4 1543 aa14.23□□□□□ -0.13
CCM2-210ENST00000478169 LRP5O75197 1615 aa14.23□□□□□ -0.13
CCM2-210ENST00000478169 A0A0G2JS52 829 aa14.22□□□□□ -0.13
CCM2-210ENST00000478169 MYT1Q01538 1121 aa14.22□□□□□ -0.13
CCM2-210ENST00000478169 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
CCM2-210ENST00000478169 CRYBG1Q9Y4K1 1723 aa14.21□□□□□ -0.13
CCM2-210ENST00000478169 MINK1Q8N4C8 1332 aaPredicted RBP14.21□□□□□ -0.13
CCM2-210ENST00000478169 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms