RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 CFAP53Q96M91 514 aa12.45□□□□□ -0.42
CMC1-209ENST00000477739 CYB5RLQ6IPT4 315 aa12.45□□□□□ -0.42
CMC1-209ENST00000477739 NOS1P29475 1434 aa12.44□□□□□ -0.42
CMC1-209ENST00000477739 C8orf34Q49A92 452 aa12.44□□□□□ -0.42
CMC1-209ENST00000477739 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
CMC1-209ENST00000477739 UGGT1Q9NYU2 1555 aa12.44□□□□□ -0.42
CMC1-209ENST00000477739 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
CMC1-209ENST00000477739 FOXD4L6Q3SYB3 417 aaPredicted RBP12.43□□□□□ -0.42
CMC1-209ENST00000477739 FOXD4L3Q6VB84 417 aaPredicted RBP12.43□□□□□ -0.42
CMC1-209ENST00000477739 ZFYVE16Q7Z3T8 1539 aa12.43□□□□□ -0.42
CMC1-209ENST00000477739 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
CMC1-209ENST00000477739 RLBP1P12271 317 aa12.42□□□□□ -0.42
CMC1-209ENST00000477739 SLFN5Q08AF3 891 aa12.42□□□□□ -0.42
CMC1-209ENST00000477739 THUMPD2Q9BTF0 503 aaKnown RBP12.42□□□□□ -0.42
CMC1-209ENST00000477739 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
CMC1-209ENST00000477739 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
CMC1-209ENST00000477739 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
CMC1-209ENST00000477739 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
CMC1-209ENST00000477739 HMOX1P09601 288 aa12.41□□□□□ -0.42
CMC1-209ENST00000477739 NOL8Q76FK4 1167 aaKnown RBP12.41□□□□□ -0.42
CMC1-209ENST00000477739 PTPRTO14522 1441 aa12.41□□□□□ -0.42
CMC1-209ENST00000477739 TRPM2O94759 1503 aa12.41□□□□□ -0.42
CMC1-209ENST00000477739 E9PSI1 815 aa12.4□□□□□ -0.42
CMC1-209ENST00000477739 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
CMC1-209ENST00000477739 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
CMC1-209ENST00000477739 ASXL1Q8IXJ9 1541 aa12.4□□□□□ -0.42
CMC1-209ENST00000477739 CGNL1Q0VF96 1302 aa12.39□□□□□ -0.43
CMC1-209ENST00000477739 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
CMC1-209ENST00000477739 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
CMC1-209ENST00000477739 BLMP54132 1417 aaPredicted RBP12.39□□□□□ -0.43
CMC1-209ENST00000477739 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
CMC1-209ENST00000477739 ZNF518AQ6AHZ1 1483 aa12.39□□□□□ -0.43
CMC1-209ENST00000477739 NSD3Q9BZ95 1437 aa12.39□□□□□ -0.43
CMC1-209ENST00000477739 E9PCH4 1651 aa12.39□□□□□ -0.43
CMC1-209ENST00000477739 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
CMC1-209ENST00000477739 EXOSC9Q06265 439 aaKnown RBP12.38□□□□□ -0.43
CMC1-209ENST00000477739 C14orf93Q9H972 538 aaKnown RBP12.38□□□□□ -0.43
CMC1-209ENST00000477739 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
CMC1-209ENST00000477739 CLTCL1P53675 1640 aa12.38□□□□□ -0.43
CMC1-209ENST00000477739 IDI1Q13907 227 aa12.37□□□□□ -0.43
CMC1-209ENST00000477739 PANK2Q9BZ23 570 aa12.37□□□□□ -0.43
CMC1-209ENST00000477739 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
CMC1-209ENST00000477739 ANKRD45Q5TZF3 282 aa12.35□□□□□ -0.43
CMC1-209ENST00000477739 MADDQ8WXG6 1647 aa12.35□□□□□ -0.43
CMC1-209ENST00000477739 RUNDC1Q96C34 613 aa12.35□□□□□ -0.43
CMC1-209ENST00000477739 RWDD1Q9H446 243 aaPredicted RBP12.35□□□□□ -0.43
CMC1-209ENST00000477739 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
CMC1-209ENST00000477739 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
CMC1-209ENST00000477739 MPNDQ8N594 471 aa12.34□□□□□ -0.43
CMC1-209ENST00000477739 PIK3C2GO75747 1445 aa12.34□□□□□ -0.43
CMC1-209ENST00000477739 NPATQ14207 1427 aa12.34□□□□□ -0.43
CMC1-209ENST00000477739 RPGRIP1LQ68CZ1 1315 aa12.33□□□□□ -0.43
CMC1-209ENST00000477739 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
CMC1-209ENST00000477739 ZMYM4Q5VZL5 1548 aa12.33□□□□□ -0.44
CMC1-209ENST00000477739 ARAP3Q8WWN8 1544 aa12.33□□□□□ -0.44
CMC1-209ENST00000477739 RIPK4P57078 832 aa12.33□□□□□ -0.44
CMC1-209ENST00000477739 ERVK-7P63135 1459 aa12.33□□□□□ -0.44
CMC1-209ENST00000477739 SPHKAPQ2M3C7 1700 aa12.33□□□□□ -0.44
CMC1-209ENST00000477739 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
CMC1-209ENST00000477739 PRAM1Q96QH2 718 aa12.33□□□□□ -0.44
CMC1-209ENST00000477739 TET3O43151 1660 aa12.32□□□□□ -0.44
CMC1-209ENST00000477739 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
CMC1-209ENST00000477739 LAMC1P11047 1609 aa12.32□□□□□ -0.44
CMC1-209ENST00000477739 TRIM44Q96DX7 344 aaPredicted RBP12.32□□□□□ -0.44
CMC1-209ENST00000477739 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
CMC1-209ENST00000477739 RARSP54136 660 aaKnown RBP12.32□□□□□ -0.44
CMC1-209ENST00000477739 GOLGA6L3A6NEY3 463 aa12.31□□□□□ -0.44
CMC1-209ENST00000477739 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
CMC1-209ENST00000477739 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
CMC1-209ENST00000477739 NOB1Q9ULX3 412 aaKnown RBP12.31□□□□□ -0.44
CMC1-209ENST00000477739 ZKSCAN2Q63HK3 967 aa12.31□□□□□ -0.44
CMC1-209ENST00000477739 NPC1L1Q9UHC9 1359 aa12.31□□□□□ -0.44
CMC1-209ENST00000477739 HDGFL2Q7Z4V5 671 aaPredicted RBP12.31□□□□□ -0.44
CMC1-209ENST00000477739 INSRP06213 1382 aa12.3□□□□□ -0.44
CMC1-209ENST00000477739 KDM2BQ8NHM5 1336 aa12.3□□□□□ -0.44
CMC1-209ENST00000477739 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
CMC1-209ENST00000477739 POGZQ7Z3K3 1410 aa12.3□□□□□ -0.44
CMC1-209ENST00000477739 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
CMC1-209ENST00000477739 NGEFQ8N5V2 710 aa12.3□□□□□ -0.44
CMC1-209ENST00000477739 PMFBP1Q8TBY8 1022 aa12.3□□□□□ -0.44
CMC1-209ENST00000477739 DTNBO60941 627 aa12.29□□□□□ -0.44
CMC1-209ENST00000477739 MYH16Q9H6N6 1097 aa12.29□□□□□ -0.44
CMC1-209ENST00000477739 ZNF521Q96K83 1311 aa12.29□□□□□ -0.44
CMC1-209ENST00000477739 SYNMO15061 1565 aa12.29□□□□□ -0.44
CMC1-209ENST00000477739 NKTRP30414 1462 aaKnown RBP12.29□□□□□ -0.44
CMC1-209ENST00000477739 SLC4A10Q6U841 1118 aa12.29□□□□□ -0.44
CMC1-209ENST00000477739 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
CMC1-209ENST00000477739 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
CMC1-209ENST00000477739 SSH1Q8WYL5 1049 aa12.28□□□□□ -0.44
CMC1-209ENST00000477739 ABCA9Q8IUA7 1624 aa12.28□□□□□ -0.44
CMC1-209ENST00000477739 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
CMC1-209ENST00000477739 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
CMC1-209ENST00000477739 INO80Q9ULG1 1556 aaPredicted RBP12.28□□□□□ -0.44
CMC1-209ENST00000477739 EFCAB6Q5THR3 1501 aa12.28□□□□□ -0.44
CMC1-209ENST00000477739 MYOM2P54296 1465 aa12.28□□□□□ -0.44
CMC1-209ENST00000477739 PLCB2Q00722 1185 aa12.27□□□□□ -0.44
CMC1-209ENST00000477739 PNNQ9H307 717 aaKnown RBP12.27□□□□□ -0.45
CMC1-209ENST00000477739 RNF17Q9BXT8 1623 aaKnown RBP12.27□□□□□ -0.45
CMC1-209ENST00000477739 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
CMC1-209ENST00000477739 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms