RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 DDX17Q92841 729 aaKnown RBP17.8■□□□□ 0.44
PTPN7-210ENST00000477625 KNDC1Q76NI1 1749 aa17.8■□□□□ 0.44
PTPN7-210ENST00000477625 SPATA31A6Q5VVP1 1343 aa17.79■□□□□ 0.44
PTPN7-210ENST00000477625 LRRC59Q96AG4 307 aaKnown RBP17.79■□□□□ 0.44
PTPN7-210ENST00000477625 RGS17Q9UGC6 210 aaPredicted RBP17.78■□□□□ 0.44
PTPN7-210ENST00000477625 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
PTPN7-210ENST00000477625 ESCO1Q5FWF5 840 aa17.77■□□□□ 0.44
PTPN7-210ENST00000477625 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
PTPN7-210ENST00000477625 ADGRB1O14514 1584 aa17.76■□□□□ 0.43
PTPN7-210ENST00000477625 SOCS7O14512 581 aa17.76■□□□□ 0.43
PTPN7-210ENST00000477625 POGKQ9P215 609 aa17.76■□□□□ 0.43
PTPN7-210ENST00000477625 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
PTPN7-210ENST00000477625 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
PTPN7-210ENST00000477625 TRIM26Q12899 539 aaPredicted RBP17.75■□□□□ 0.43
PTPN7-210ENST00000477625 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
PTPN7-210ENST00000477625 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
PTPN7-210ENST00000477625 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTPN7-210ENST00000477625 SOS2Q07890 1332 aaPredicted RBP17.73■□□□□ 0.43
PTPN7-210ENST00000477625 SHPRHQ149N8 1683 aa17.73■□□□□ 0.43
PTPN7-210ENST00000477625 FOXO3O43524 673 aa17.71■□□□□ 0.43
PTPN7-210ENST00000477625 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.43
PTPN7-210ENST00000477625 SIN3AQ96ST3 1273 aa17.71■□□□□ 0.43
PTPN7-210ENST00000477625 NPHP3Q7Z494 1330 aa17.71■□□□□ 0.42
PTPN7-210ENST00000477625 LRP6O75581 1613 aa17.7■□□□□ 0.42
PTPN7-210ENST00000477625 NUTM2BA6NNL0 878 aaPredicted RBP17.7■□□□□ 0.42
PTPN7-210ENST00000477625 NUTM2EB1AL46 878 aaPredicted RBP17.7■□□□□ 0.42
PTPN7-210ENST00000477625 NUTM2AQ8IVF1 878 aaPredicted RBP17.7■□□□□ 0.42
PTPN7-210ENST00000477625 PNPLA6Q8IY17 1366 aa17.69■□□□□ 0.42
PTPN7-210ENST00000477625 L3MBTL2Q969R5 705 aa17.69■□□□□ 0.42
PTPN7-210ENST00000477625 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
PTPN7-210ENST00000477625 POTEAQ6S8J7 498 aa17.68■□□□□ 0.42
PTPN7-210ENST00000477625 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
PTPN7-210ENST00000477625 MINK1Q8N4C8 1332 aaPredicted RBP17.67■□□□□ 0.42
PTPN7-210ENST00000477625 NBPF1Q3BBV0 1214 aa17.66■□□□□ 0.42
PTPN7-210ENST00000477625 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
PTPN7-210ENST00000477625 XPCQ01831 940 aaPredicted RBP17.65■□□□□ 0.42
PTPN7-210ENST00000477625 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
PTPN7-210ENST00000477625 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
PTPN7-210ENST00000477625 KIAA1210Q9ULL0 1709 aa17.64■□□□□ 0.41
PTPN7-210ENST00000477625 PXDNQ92626 1479 aa17.63■□□□□ 0.41
PTPN7-210ENST00000477625 WASLO00401 505 aaPredicted RBP17.63■□□□□ 0.41
PTPN7-210ENST00000477625 ANKARQ7Z5J8 1434 aa17.63■□□□□ 0.41
PTPN7-210ENST00000477625 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
PTPN7-210ENST00000477625 KRT28Q7Z3Y7 464 aa17.62■□□□□ 0.41
PTPN7-210ENST00000477625 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
PTPN7-210ENST00000477625 KIF1AQ12756 1690 aa17.61■□□□□ 0.41
PTPN7-210ENST00000477625 ADAMTS2O95450 1211 aa17.6■□□□□ 0.41
PTPN7-210ENST00000477625 PSME1Q06323 249 aa17.6■□□□□ 0.41
PTPN7-210ENST00000477625 RGPD8O14715 1765 aaPredicted RBP17.59■□□□□ 0.41
PTPN7-210ENST00000477625 ARHGEF28Q8N1W1 1705 aaKnown RBP17.59■□□□□ 0.41
PTPN7-210ENST00000477625 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
PTPN7-210ENST00000477625 PMFBP1Q8TBY8 1022 aa17.59■□□□□ 0.41
PTPN7-210ENST00000477625 C8orf37Q96NL8 207 aa17.59■□□□□ 0.41
PTPN7-210ENST00000477625 AFF2P51816 1311 aa17.58■□□□□ 0.4
PTPN7-210ENST00000477625 PRR36Q9H6K5 1346 aa17.58■□□□□ 0.4
PTPN7-210ENST00000477625 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
PTPN7-210ENST00000477625 USP32Q8NFA0 1604 aa17.57■□□□□ 0.4
PTPN7-210ENST00000477625 CDK19Q9BWU1 502 aa17.56■□□□□ 0.4
PTPN7-210ENST00000477625 COL22A1Q8NFW1 1626 aaPredicted RBP17.56■□□□□ 0.4
PTPN7-210ENST00000477625 TULP4Q9NRJ4 1543 aa17.56■□□□□ 0.4
PTPN7-210ENST00000477625 NUDT16Q96DE0 195 aaKnown RBP17.55■□□□□ 0.4
PTPN7-210ENST00000477625 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
PTPN7-210ENST00000477625 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
PTPN7-210ENST00000477625 RXRBP28702 533 aa17.53■□□□□ 0.4
PTPN7-210ENST00000477625 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
PTPN7-210ENST00000477625 NBPF8Q3BBV2 869 aa17.52■□□□□ 0.4
PTPN7-210ENST00000477625 FNBP4Q8N3X1 1017 aaPredicted RBP17.52■□□□□ 0.4
PTPN7-210ENST00000477625 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
PTPN7-210ENST00000477625 QTRT2Q9H974 415 aaKnown RBP17.52■□□□□ 0.4
PTPN7-210ENST00000477625 TNS3Q68CZ2 1445 aa17.52■□□□□ 0.4
PTPN7-210ENST00000477625 ROCK2O75116 1388 aaKnown RBP17.52■□□□□ 0.39
PTPN7-210ENST00000477625 LMOD2Q6P5Q4 547 aa17.51■□□□□ 0.39
PTPN7-210ENST00000477625 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
PTPN7-210ENST00000477625 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
PTPN7-210ENST00000477625 USP21Q9UK80 565 aa17.5■□□□□ 0.39
PTPN7-210ENST00000477625 ARHGEF10O15013 1369 aa17.5■□□□□ 0.39
PTPN7-210ENST00000477625 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
PTPN7-210ENST00000477625 ATP7BP35670 1465 aa17.5■□□□□ 0.39
PTPN7-210ENST00000477625 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
PTPN7-210ENST00000477625 CABLES1Q8TDN4 633 aa17.48■□□□□ 0.39
PTPN7-210ENST00000477625 PLEKHG3A1L390 1219 aa17.47■□□□□ 0.39
PTPN7-210ENST00000477625 HAP1P54257 671 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-210ENST00000477625 RBM6P78332 1123 aaKnown RBP17.47■□□□□ 0.39
PTPN7-210ENST00000477625 PAK3O75914 559 aaPredicted RBP17.46■□□□□ 0.39
PTPN7-210ENST00000477625 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
PTPN7-210ENST00000477625 CABP2Q9NPB3 220 aa17.46■□□□□ 0.39
PTPN7-210ENST00000477625 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
PTPN7-210ENST00000477625 ACEP12821 1306 aa17.45■□□□□ 0.38
PTPN7-210ENST00000477625 ITSN1Q15811 1721 aa17.44■□□□□ 0.38
PTPN7-210ENST00000477625 POLR3AO14802 1390 aaPredicted RBP17.44■□□□□ 0.38
PTPN7-210ENST00000477625 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
PTPN7-210ENST00000477625 EVC2Q86UK5 1308 aa17.44■□□□□ 0.38
PTPN7-210ENST00000477625 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
PTPN7-210ENST00000477625 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
PTPN7-210ENST00000477625 TRPM3Q9HCF6 1732 aaPredicted RBP17.43■□□□□ 0.38
PTPN7-210ENST00000477625 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
PTPN7-210ENST00000477625 MARF1Q9Y4F3 1742 aaKnown RBP17.42■□□□□ 0.38
PTPN7-210ENST00000477625 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
PTPN7-210ENST00000477625 UNC5CLQ8IV45 518 aa17.41■□□□□ 0.38
PTPN7-210ENST00000477625 ATRNO75882 1429 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms