RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 KIAA1210Q9ULL0 1709 aa32.34■■■□□ 2.77
SF1-214ENST00000477596 TRAK1Q9UPV9 953 aa32.33■■■□□ 2.77
SF1-214ENST00000477596 PRAM1Q96QH2 718 aa32.32■■■□□ 2.76
SF1-214ENST00000477596 COL16A1Q07092 1604 aaPredicted RBP32.32■■■□□ 2.76
SF1-214ENST00000477596 AHDC1Q5TGY3 1603 aaPredicted RBP32.32■■■□□ 2.76
SF1-214ENST00000477596 SAFB2Q14151 953 aaKnown RBP eCLIP32.31■■■□□ 2.76
SF1-214ENST00000477596 SIRT1Q96EB6 747 aa32.3■■■□□ 2.76
SF1-214ENST00000477596 ARHGEF28Q8N1W1 1705 aaKnown RBP32.29■■■□□ 2.76
SF1-214ENST00000477596 MED1Q15648 1581 aaPredicted RBP32.28■■■□□ 2.76
SF1-214ENST00000477596 NHSL1Q5SYE7 1610 aa32.27■■■□□ 2.76
SF1-214ENST00000477596 FMN2Q9NZ56 1722 aa32.26■■■□□ 2.76
SF1-214ENST00000477596 NBPF1Q3BBV0 1214 aa32.26■■■□□ 2.75
SF1-214ENST00000477596 POGKQ9P215 609 aa32.24■■■□□ 2.75
SF1-214ENST00000477596 NUTM2FA1L443 756 aa32.23■■■□□ 2.75
SF1-214ENST00000477596 DDX17Q92841 729 aaKnown RBP32.23■■■□□ 2.75
SF1-214ENST00000477596 ORAI2Q96SN7 254 aa32.23■■■□□ 2.75
SF1-214ENST00000477596 TRPM1Q7Z4N2 1603 aa32.22■■■□□ 2.75
SF1-214ENST00000477596 DISP3Q9P2K9 1392 aa32.21■■■□□ 2.75
SF1-214ENST00000477596 ADGRB2O60241 1585 aa32.19■■■□□ 2.74
SF1-214ENST00000477596 TONSLQ96HA7 1378 aa32.17■■■□□ 2.74
SF1-214ENST00000477596 HIRIP3Q9BW71 556 aaPredicted RBP32.16■■■□□ 2.74
SF1-214ENST00000477596 MINK1Q8N4C8 1332 aaPredicted RBP32.16■■■□□ 2.74
SF1-214ENST00000477596 NBPF8Q3BBV2 869 aa32.14■■■□□ 2.74
SF1-214ENST00000477596 RGPD8O14715 1765 aaPredicted RBP32.14■■■□□ 2.74
SF1-214ENST00000477596 ESCO1Q5FWF5 840 aa32.13■■■□□ 2.73
SF1-214ENST00000477596 JCADQ9P266 1359 aa32.13■■■□□ 2.73
SF1-214ENST00000477596 USP32Q8NFA0 1604 aa32.11■■■□□ 2.73
SF1-214ENST00000477596 SHPRHQ149N8 1683 aa32.1■■■□□ 2.73
SF1-214ENST00000477596 ROCK2O75116 1388 aaKnown RBP32.07■■■□□ 2.72
SF1-214ENST00000477596 KIF1AQ12756 1690 aa32.05■■■□□ 2.72
SF1-214ENST00000477596 SOS2Q07890 1332 aaPredicted RBP32.03■■■□□ 2.72
SF1-214ENST00000477596 TULP4Q9NRJ4 1543 aa32.03■■■□□ 2.72
SF1-214ENST00000477596 LRP6O75581 1613 aa32.03■■■□□ 2.72
SF1-214ENST00000477596 PXDNQ92626 1479 aa32.03■■■□□ 2.72
SF1-214ENST00000477596 QRICH2Q9H0J4 1663 aa32.02■■■□□ 2.72
SF1-214ENST00000477596 ANKARQ7Z5J8 1434 aa32.02■■■□□ 2.72
SF1-214ENST00000477596 XPCQ01831 940 aaPredicted RBP32.02■■■□□ 2.72
SF1-214ENST00000477596 PRR36Q9H6K5 1346 aa32.01■■■□□ 2.72
SF1-214ENST00000477596 WASLO00401 505 aaPredicted RBP32.01■■■□□ 2.71
SF1-214ENST00000477596 FOXO3O43524 673 aa32.01■■■□□ 2.71
SF1-214ENST00000477596 NPHP3Q7Z494 1330 aa32■■■□□ 2.71
SF1-214ENST00000477596 RALGAPBQ86X10 1494 aa31.99■■■□□ 2.71
SF1-214ENST00000477596 PNPLA6Q8IY17 1366 aa31.99■■■□□ 2.71
SF1-214ENST00000477596 CENPJQ9HC77 1338 aaPredicted RBP31.99■■■□□ 2.71
SF1-214ENST00000477596 GPRASP1Q5JY77 1395 aa31.98■■■□□ 2.71
SF1-214ENST00000477596 LRRC59Q96AG4 307 aaKnown RBP31.98■■■□□ 2.71
SF1-214ENST00000477596 PHF8Q9UPP1 1060 aa31.97■■■□□ 2.71
SF1-214ENST00000477596 ATP7BP35670 1465 aa31.96■■■□□ 2.71
SF1-214ENST00000477596 SPATA31A6Q5VVP1 1343 aa31.96■■■□□ 2.71
SF1-214ENST00000477596 PHF23Q9BUL5 403 aaPredicted RBP31.95■■■□□ 2.71
SF1-214ENST00000477596 EIF3AQ14152 1382 aaKnown RBP31.94■■■□□ 2.7
SF1-214ENST00000477596 PMFBP1Q8TBY8 1022 aa31.93■■■□□ 2.7
SF1-214ENST00000477596 ILDR2Q71H61 639 aa31.92■■■□□ 2.7
SF1-214ENST00000477596 CDK19Q9BWU1 502 aa31.92■■■□□ 2.7
SF1-214ENST00000477596 CLSPNQ9HAW4 1339 aa31.92■■■□□ 2.7
SF1-214ENST00000477596 NUTM2BA6NNL0 878 aaPredicted RBP31.91■■■□□ 2.7
SF1-214ENST00000477596 NUTM2EB1AL46 878 aaPredicted RBP31.91■■■□□ 2.7
SF1-214ENST00000477596 NUTM2AQ8IVF1 878 aaPredicted RBP31.91■■■□□ 2.7
SF1-214ENST00000477596 TOPAZ1Q8N9V7 1692 aa31.89■■■□□ 2.7
SF1-214ENST00000477596 ITSN1Q15811 1721 aa31.89■■■□□ 2.7
SF1-214ENST00000477596 CCER1Q8TC90 406 aaPredicted RBP31.89■■■□□ 2.7
SF1-214ENST00000477596 CARD11Q9BXL7 1154 aa31.88■■■□□ 2.69
SF1-214ENST00000477596 RGS17Q9UGC6 210 aaPredicted RBP31.88■■■□□ 2.69
SF1-214ENST00000477596 COL22A1Q8NFW1 1626 aaPredicted RBP31.87■■■□□ 2.69
SF1-214ENST00000477596 KRT28Q7Z3Y7 464 aa31.86■■■□□ 2.69
SF1-214ENST00000477596 NUDT16Q96DE0 195 aaKnown RBP31.86■■■□□ 2.69
SF1-214ENST00000477596 MEX3CQ5U5Q3 659 aaKnown RBP31.83■■■□□ 2.69
SF1-214ENST00000477596 SPATA31A3Q5VYP0 1347 aa31.81■■■□□ 2.68
SF1-214ENST00000477596 TRPM3Q9HCF6 1732 aaPredicted RBP31.81■■■□□ 2.68
SF1-214ENST00000477596 CABP2Q9NPB3 220 aa31.81■■■□□ 2.68
SF1-214ENST00000477596 TNS3Q68CZ2 1445 aa31.81■■■□□ 2.68
SF1-214ENST00000477596 SRPK2P78362 688 aaKnown RBP31.8■■■□□ 2.68
SF1-214ENST00000477596 PSME1Q06323 249 aa31.79■■■□□ 2.68
SF1-214ENST00000477596 NGDNQ8NEJ9 315 aaKnown RBP31.76■■■□□ 2.67
SF1-214ENST00000477596 SBNO1A3KN83 1393 aa31.76■■■□□ 2.67
SF1-214ENST00000477596 ADAMTS2O95450 1211 aa31.74■■■□□ 2.67
SF1-214ENST00000477596 CCDC61Q9Y6R9 512 aa31.74■■■□□ 2.67
SF1-214ENST00000477596 PPIP5K1Q6PFW1 1433 aa31.74■■■□□ 2.67
SF1-214ENST00000477596 TIMELESSQ9UNS1 1208 aa31.73■■■□□ 2.67
SF1-214ENST00000477596 EVC2Q86UK5 1308 aa31.73■■■□□ 2.67
SF1-214ENST00000477596 POTEAQ6S8J7 498 aa31.72■■■□□ 2.67
SF1-214ENST00000477596 ALS2Q96Q42 1657 aa31.72■■■□□ 2.67
SF1-214ENST00000477596 POLR3AO14802 1390 aaPredicted RBP31.7■■■□□ 2.67
SF1-214ENST00000477596 SBNO2Q9Y2G9 1366 aa31.7■■■□□ 2.67
SF1-214ENST00000477596 PLEKHG5O94827 1062 aa31.7■■■□□ 2.67
SF1-214ENST00000477596 LMOD2Q6P5Q4 547 aa31.7■■■□□ 2.67
SF1-214ENST00000477596 C8orf37Q96NL8 207 aa31.7■■■□□ 2.67
SF1-214ENST00000477596 ACEP12821 1306 aa31.7■■■□□ 2.66
SF1-214ENST00000477596 ABCA3Q99758 1704 aa31.69■■■□□ 2.66
SF1-214ENST00000477596 PLEKHG3A1L390 1219 aa31.68■■■□□ 2.66
SF1-214ENST00000477596 AFF2P51816 1311 aa31.67■■■□□ 2.66
SF1-214ENST00000477596 ARHGEF10O15013 1369 aa31.67■■■□□ 2.66
SF1-214ENST00000477596 MARF1Q9Y4F3 1742 aaKnown RBP31.66■■■□□ 2.66
SF1-214ENST00000477596 CABLES1Q8TDN4 633 aa31.66■■■□□ 2.66
SF1-214ENST00000477596 ST20-MTHFSA0A0A6YYL1 179 aa31.63■■■□□ 2.65
SF1-214ENST00000477596 PAK3O75914 559 aaPredicted RBP31.63■■■□□ 2.65
SF1-214ENST00000477596 CABP1Q9NZU7 370 aa31.63■■■□□ 2.65
SF1-214ENST00000477596 USP47Q96K76 1375 aa31.63■■■□□ 2.65
SF1-214ENST00000477596 TESK2Q96S53 571 aa31.6■■■□□ 2.65
SF1-214ENST00000477596 CRYBG1Q9Y4K1 1723 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms