RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
TNRC6A-206ENST00000477487 GTF3C3Q9Y5Q9 886 aa16.18■□□□□ 0.18
TNRC6A-206ENST00000477487 ADAMTSL3P82987 1691 aa16.17■□□□□ 0.18
TNRC6A-206ENST00000477487 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
TNRC6A-206ENST00000477487 POGKQ9P215 609 aa16.17■□□□□ 0.18
TNRC6A-206ENST00000477487 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
TNRC6A-206ENST00000477487 ADAMTS13Q76LX8 1427 aa16.15■□□□□ 0.18
TNRC6A-206ENST00000477487 NLRP1Q9C000 1473 aa16.15■□□□□ 0.18
TNRC6A-206ENST00000477487 NCKAP5LQ9HCH0 1330 aa16.13■□□□□ 0.17
TNRC6A-206ENST00000477487 SBNO2Q9Y2G9 1366 aa16.13■□□□□ 0.17
TNRC6A-206ENST00000477487 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.13■□□□□ 0.17
TNRC6A-206ENST00000477487 SRPK2P78362 688 aaKnown RBP16.12■□□□□ 0.17
TNRC6A-206ENST00000477487 HNRNPUQ00839 825 aaKnown RBP eCLIP16.11■□□□□ 0.17
TNRC6A-206ENST00000477487 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
TNRC6A-206ENST00000477487 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
TNRC6A-206ENST00000477487 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
TNRC6A-206ENST00000477487 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
TNRC6A-206ENST00000477487 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
TNRC6A-206ENST00000477487 KNSTRNQ9Y448 316 aa16.1■□□□□ 0.17
TNRC6A-206ENST00000477487 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
TNRC6A-206ENST00000477487 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
TNRC6A-206ENST00000477487 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
TNRC6A-206ENST00000477487 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
TNRC6A-206ENST00000477487 EVC2Q86UK5 1308 aa16.09■□□□□ 0.17
TNRC6A-206ENST00000477487 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
TNRC6A-206ENST00000477487 CDK19Q9BWU1 502 aa16.09■□□□□ 0.17
TNRC6A-206ENST00000477487 ARHGAP23Q9P227 1491 aa16.08■□□□□ 0.17
TNRC6A-206ENST00000477487 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
TNRC6A-206ENST00000477487 THEMISQ8N1K5 641 aaPredicted RBP16.08■□□□□ 0.16
TNRC6A-206ENST00000477487 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
TNRC6A-206ENST00000477487 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
TNRC6A-206ENST00000477487 EID1Q9Y6B2 187 aa16.07■□□□□ 0.16
TNRC6A-206ENST00000477487 SLIT1O75093 1534 aa16.07■□□□□ 0.16
TNRC6A-206ENST00000477487 NSD3Q9BZ95 1437 aa16.06■□□□□ 0.16
TNRC6A-206ENST00000477487 ABCC11Q96J66 1382 aa16.06■□□□□ 0.16
TNRC6A-206ENST00000477487 RALBP1Q15311 655 aa16.06■□□□□ 0.16
TNRC6A-206ENST00000477487 PNISRQ8TF01 805 aaKnown RBP16.06■□□□□ 0.16
TNRC6A-206ENST00000477487 HDGFP51858 240 aaKnown RBP16.05■□□□□ 0.16
TNRC6A-206ENST00000477487 MED14O60244 1454 aa16.04■□□□□ 0.16
TNRC6A-206ENST00000477487 CABP1Q9NZU7 370 aa16.04■□□□□ 0.16
TNRC6A-206ENST00000477487 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
TNRC6A-206ENST00000477487 ZBTB22O15209 634 aa16.03■□□□□ 0.16
TNRC6A-206ENST00000477487 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
TNRC6A-206ENST00000477487 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
TNRC6A-206ENST00000477487 A0A1W2PP64 1363 aa16.02■□□□□ 0.16
TNRC6A-206ENST00000477487 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.02■□□□□ 0.15
TNRC6A-206ENST00000477487 CD163L1Q9NR16 1453 aa16.01■□□□□ 0.15
TNRC6A-206ENST00000477487 SALL2Q9Y467 1007 aaPredicted RBP16.01■□□□□ 0.15
TNRC6A-206ENST00000477487 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
TNRC6A-206ENST00000477487 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
TNRC6A-206ENST00000477487 KCNA6P17658 529 aa16■□□□□ 0.15
TNRC6A-206ENST00000477487 FBLN1P23142 703 aa16■□□□□ 0.15
TNRC6A-206ENST00000477487 SETD1BQ9UPS6 1966 aaKnown RBP16■□□□□ 0.15
TNRC6A-206ENST00000477487 PRR36Q9H6K5 1346 aa16■□□□□ 0.15
TNRC6A-206ENST00000477487 WASLO00401 505 aaPredicted RBP15.99■□□□□ 0.15
TNRC6A-206ENST00000477487 BRD4O60885 1362 aaPredicted RBP15.98■□□□□ 0.15
TNRC6A-206ENST00000477487 HSPA2P54652 639 aa15.98■□□□□ 0.15
TNRC6A-206ENST00000477487 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
TNRC6A-206ENST00000477487 CPS1P31327 1500 aa15.98■□□□□ 0.15
TNRC6A-206ENST00000477487 KDM4FA0A1W2PPD8 638 aa15.98■□□□□ 0.15
TNRC6A-206ENST00000477487 TECPR2O15040 1411 aa15.98■□□□□ 0.15
TNRC6A-206ENST00000477487 KNDC1Q76NI1 1749 aa15.97■□□□□ 0.15
TNRC6A-206ENST00000477487 ADRA2BP18089 450 aa15.97■□□□□ 0.15
TNRC6A-206ENST00000477487 TBX22Q9Y458 520 aa15.97■□□□□ 0.15
TNRC6A-206ENST00000477487 HAP1P54257 671 aaPredicted RBP15.97■□□□□ 0.15
TNRC6A-206ENST00000477487 ZNF142P52746 1687 aaPredicted RBP15.97■□□□□ 0.15
TNRC6A-206ENST00000477487 ANKRD36BQ8N2N9 1353 aa15.97■□□□□ 0.15
TNRC6A-206ENST00000477487 ANKLE2Q86XL3 938 aa15.96■□□□□ 0.15
TNRC6A-206ENST00000477487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.96■□□□□ 0.15
TNRC6A-206ENST00000477487 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
TNRC6A-206ENST00000477487 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.14
TNRC6A-206ENST00000477487 FAM135BQ49AJ0 1406 aa15.94■□□□□ 0.14
TNRC6A-206ENST00000477487 MORC1Q86VD1 984 aa15.94■□□□□ 0.14
TNRC6A-206ENST00000477487 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
TNRC6A-206ENST00000477487 ATAD2Q6PL18 1390 aa15.93■□□□□ 0.14
TNRC6A-206ENST00000477487 PPIP5K1Q6PFW1 1433 aa15.93■□□□□ 0.14
TNRC6A-206ENST00000477487 FYB1O15117 783 aa15.92■□□□□ 0.14
TNRC6A-206ENST00000477487 RGPD8O14715 1765 aaPredicted RBP15.92■□□□□ 0.14
TNRC6A-206ENST00000477487 PUS7Q96PZ0 661 aaKnown RBP15.91■□□□□ 0.14
TNRC6A-206ENST00000477487 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
TNRC6A-206ENST00000477487 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
TNRC6A-206ENST00000477487 ATP7BP35670 1465 aa15.9■□□□□ 0.14
TNRC6A-206ENST00000477487 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
TNRC6A-206ENST00000477487 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
TNRC6A-206ENST00000477487 CCDC146Q8IYE0 955 aa15.89■□□□□ 0.13
TNRC6A-206ENST00000477487 NME9Q86XW9 330 aa15.89■□□□□ 0.13
TNRC6A-206ENST00000477487 SIRT1Q96EB6 747 aa15.89■□□□□ 0.13
TNRC6A-206ENST00000477487 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
TNRC6A-206ENST00000477487 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
TNRC6A-206ENST00000477487 MTHFSP49914 203 aa15.88■□□□□ 0.13
TNRC6A-206ENST00000477487 NPHP4O75161 1426 aaPredicted RBP15.87■□□□□ 0.13
TNRC6A-206ENST00000477487 USP32Q8NFA0 1604 aa15.87■□□□□ 0.13
TNRC6A-206ENST00000477487 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
TNRC6A-206ENST00000477487 HDGFL2Q7Z4V5 671 aaPredicted RBP15.87■□□□□ 0.13
TNRC6A-206ENST00000477487 CHD2O14647 1828 aaKnown RBP15.86■□□□□ 0.13
TNRC6A-206ENST00000477487 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
TNRC6A-206ENST00000477487 DIP2AQ14689 1571 aa15.85■□□□□ 0.13
TNRC6A-206ENST00000477487 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
TNRC6A-206ENST00000477487 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
TNRC6A-206ENST00000477487 ACEP12821 1306 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms