RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 FAM50AQ14320 339 aaKnown RBP23.96■■□□□ 1.43
SMG5-204ENST00000476954 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
SMG5-204ENST00000476954 XPCQ01831 940 aaPredicted RBP23.93■■□□□ 1.42
SMG5-204ENST00000476954 ROBO2Q9HCK4 1378 aa23.92■■□□□ 1.42
SMG5-204ENST00000476954 PXDNQ92626 1479 aa23.92■■□□□ 1.42
SMG5-204ENST00000476954 HRCP23327 699 aa23.91■■□□□ 1.42
SMG5-204ENST00000476954 SPHKAPQ2M3C7 1700 aa23.9■■□□□ 1.42
SMG5-204ENST00000476954 NEXMIFQ5QGS0 1516 aa23.9■■□□□ 1.42
SMG5-204ENST00000476954 SF3B2Q13435 895 aaKnown RBP23.9■■□□□ 1.42
SMG5-204ENST00000476954 APLP2Q06481 763 aa23.89■■□□□ 1.41
SMG5-204ENST00000476954 UNC5CLQ8IV45 518 aa23.88■■□□□ 1.41
SMG5-204ENST00000476954 SLIT2O94813 1529 aa23.88■■□□□ 1.41
SMG5-204ENST00000476954 SEPT12Q8IYM1 358 aa23.87■■□□□ 1.41
SMG5-204ENST00000476954 NUP155O75694 1391 aa23.87■■□□□ 1.41
SMG5-204ENST00000476954 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
SMG5-204ENST00000476954 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
SMG5-204ENST00000476954 FOXO3O43524 673 aa23.84■■□□□ 1.41
SMG5-204ENST00000476954 CLTCL1P53675 1640 aa23.81■■□□□ 1.4
SMG5-204ENST00000476954 USP32Q8NFA0 1604 aa23.78■■□□□ 1.4
SMG5-204ENST00000476954 KRT27Q7Z3Y8 459 aa23.77■■□□□ 1.4
SMG5-204ENST00000476954 CDC42BPGQ6DT37 1551 aa23.77■■□□□ 1.4
SMG5-204ENST00000476954 NUTM2FA1L443 756 aa23.76■■□□□ 1.39
SMG5-204ENST00000476954 PLCH1Q4KWH8 1693 aa23.76■■□□□ 1.39
SMG5-204ENST00000476954 BAG6P46379 1132 aa23.75■■□□□ 1.39
SMG5-204ENST00000476954 R3HDM1Q15032 1099 aaKnown RBP23.75■■□□□ 1.39
SMG5-204ENST00000476954 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
SMG5-204ENST00000476954 VPS72Q15906 364 aa23.74■■□□□ 1.39
SMG5-204ENST00000476954 KIF1BO60333 1816 aa23.74■■□□□ 1.39
SMG5-204ENST00000476954 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
SMG5-204ENST00000476954 EN1Q05925 392 aaPredicted RBP23.73■■□□□ 1.39
SMG5-204ENST00000476954 CCDC9Q9Y3X0 531 aaKnown RBP23.73■■□□□ 1.39
SMG5-204ENST00000476954 ONECUT3O60422 494 aaPredicted RBP23.72■■□□□ 1.39
SMG5-204ENST00000476954 PLEKHG5O94827 1062 aa23.72■■□□□ 1.39
SMG5-204ENST00000476954 ROCK1Q13464 1354 aa23.72■■□□□ 1.39
SMG5-204ENST00000476954 SPATA31A3Q5VYP0 1347 aa23.71■■□□□ 1.39
SMG5-204ENST00000476954 YY1P25490 414 aa23.71■■□□□ 1.39
SMG5-204ENST00000476954 CABLES1Q8TDN4 633 aa23.7■■□□□ 1.38
SMG5-204ENST00000476954 NWD2Q9ULI1 1742 aa23.69■■□□□ 1.38
SMG5-204ENST00000476954 NAIPQ13075 1403 aa23.68■■□□□ 1.38
SMG5-204ENST00000476954 RGPD1P0DJD0 1748 aa23.67■■□□□ 1.38
SMG5-204ENST00000476954 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
SMG5-204ENST00000476954 A0A0G2JS52 829 aa23.67■■□□□ 1.38
SMG5-204ENST00000476954 MYT1Q01538 1121 aa23.67■■□□□ 1.38
SMG5-204ENST00000476954 FAM182BQ5T319 152 aa23.67■■□□□ 1.38
SMG5-204ENST00000476954 ABCA3Q99758 1704 aa23.65■■□□□ 1.38
SMG5-204ENST00000476954 VGFO15240 615 aaPredicted RBP23.64■■□□□ 1.37
SMG5-204ENST00000476954 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.37
SMG5-204ENST00000476954 KRT28Q7Z3Y7 464 aa23.63■■□□□ 1.37
SMG5-204ENST00000476954 WAPLQ7Z5K2 1190 aa23.63■■□□□ 1.37
SMG5-204ENST00000476954 TNS1Q9HBL0 1735 aaKnown RBP23.63■■□□□ 1.37
SMG5-204ENST00000476954 ITGAEP38570 1179 aa23.62■■□□□ 1.37
SMG5-204ENST00000476954 FAM98CQ17RN3 349 aaKnown RBP23.62■■□□□ 1.37
SMG5-204ENST00000476954 FMN2Q9NZ56 1722 aa23.62■■□□□ 1.37
SMG5-204ENST00000476954 KIF1AQ12756 1690 aa23.61■■□□□ 1.37
SMG5-204ENST00000476954 RGPD8O14715 1765 aaPredicted RBP23.6■■□□□ 1.37
SMG5-204ENST00000476954 PPLO60437 1756 aa23.6■■□□□ 1.37
SMG5-204ENST00000476954 NRAPQ86VF7 1730 aa23.6■■□□□ 1.37
SMG5-204ENST00000476954 EZH2Q15910 746 aaKnown RBP23.6■■□□□ 1.37
SMG5-204ENST00000476954 CCDC144AA2RUR9 1427 aa23.59■■□□□ 1.37
SMG5-204ENST00000476954 PLEKHH1Q9ULM0 1364 aa23.59■■□□□ 1.37
SMG5-204ENST00000476954 TNS3Q68CZ2 1445 aa23.59■■□□□ 1.37
SMG5-204ENST00000476954 FAM83GA6ND36 823 aa23.58■■□□□ 1.37
SMG5-204ENST00000476954 STK26Q9P289 416 aa23.58■■□□□ 1.37
SMG5-204ENST00000476954 DISP2A7MBM2 1401 aa23.55■■□□□ 1.36
SMG5-204ENST00000476954 LMOD2Q6P5Q4 547 aa23.53■■□□□ 1.36
SMG5-204ENST00000476954 CAMKK2Q96RR4 588 aa23.51■■□□□ 1.35
SMG5-204ENST00000476954 TECPR2O15040 1411 aa23.5■■□□□ 1.35
SMG5-204ENST00000476954 BTG4Q9NY30 223 aa23.5■■□□□ 1.35
SMG5-204ENST00000476954 RPGRIP1LQ68CZ1 1315 aa23.5■■□□□ 1.35
SMG5-204ENST00000476954 IFT172Q9UG01 1749 aa23.5■■□□□ 1.35
SMG5-204ENST00000476954 THSD7AQ9UPZ6 1657 aa23.49■■□□□ 1.35
SMG5-204ENST00000476954 PHF8Q9UPP1 1060 aa23.49■■□□□ 1.35
SMG5-204ENST00000476954 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
SMG5-204ENST00000476954 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
SMG5-204ENST00000476954 PSME1Q06323 249 aa23.47■■□□□ 1.35
SMG5-204ENST00000476954 TMEM132EQ6IEE7 984 aa23.47■■□□□ 1.35
SMG5-204ENST00000476954 SBNO1A3KN83 1393 aa23.46■■□□□ 1.35
SMG5-204ENST00000476954 TRIM37O94972 964 aa23.46■■□□□ 1.35
SMG5-204ENST00000476954 CAMTA1Q9Y6Y1 1673 aa23.46■■□□□ 1.35
SMG5-204ENST00000476954 COL14A1Q05707 1796 aaKnown RBP23.45■■□□□ 1.34
SMG5-204ENST00000476954 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
SMG5-204ENST00000476954 RREB1Q92766 1687 aa23.44■■□□□ 1.34
SMG5-204ENST00000476954 ADGRB2O60241 1585 aa23.44■■□□□ 1.34
SMG5-204ENST00000476954 SPATA31A5Q5VU36 1347 aa23.44■■□□□ 1.34
SMG5-204ENST00000476954 SPATA31A7Q8IWB4 1347 aa23.44■■□□□ 1.34
SMG5-204ENST00000476954 ARHGEF10O15013 1369 aa23.43■■□□□ 1.34
SMG5-204ENST00000476954 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
SMG5-204ENST00000476954 NRXN1Q9ULB1 1477 aa23.43■■□□□ 1.34
SMG5-204ENST00000476954 APBA3O96018 575 aa23.41■■□□□ 1.34
SMG5-204ENST00000476954 PPP1R1BQ9UD71 204 aaPredicted RBP23.39■■□□□ 1.33
SMG5-204ENST00000476954 TRPM3Q9HCF6 1732 aaPredicted RBP23.39■■□□□ 1.33
SMG5-204ENST00000476954 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
SMG5-204ENST00000476954 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
SMG5-204ENST00000476954 YTHDC2Q9H6S0 1430 aaKnown RBP23.36■■□□□ 1.33
SMG5-204ENST00000476954 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
SMG5-204ENST00000476954 FAM196AQ6ZSG2 479 aa23.35■■□□□ 1.33
SMG5-204ENST00000476954 PARD3Q8TEW0 1356 aa23.35■■□□□ 1.33
SMG5-204ENST00000476954 CRYBG1Q9Y4K1 1723 aa23.34■■□□□ 1.33
SMG5-204ENST00000476954 SPON1Q9HCB6 807 aa23.34■■□□□ 1.33
SMG5-204ENST00000476954 NINLQ9Y2I6 1382 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms