RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 C19orf44Q9H6X5 657 aa22.58■■□□□ 1.21
PSMD4-211ENST00000476855 ROCK2O75116 1388 aaKnown RBP22.58■■□□□ 1.21
PSMD4-211ENST00000476855 ATF3P18847 181 aa22.57■■□□□ 1.2
PSMD4-211ENST00000476855 AHDC1Q5TGY3 1603 aaPredicted RBP22.57■■□□□ 1.2
PSMD4-211ENST00000476855 RXRBP28702 533 aa22.55■■□□□ 1.2
PSMD4-211ENST00000476855 SHPRHQ149N8 1683 aa22.54■■□□□ 1.2
PSMD4-211ENST00000476855 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.53■■□□□ 1.2
PSMD4-211ENST00000476855 PIK3R4Q99570 1358 aa22.51■■□□□ 1.19
PSMD4-211ENST00000476855 XRN1Q8IZH2 1706 aaKnown RBP22.51■■□□□ 1.19
PSMD4-211ENST00000476855 NUTM2BA6NNL0 878 aaPredicted RBP22.5■■□□□ 1.19
PSMD4-211ENST00000476855 NUTM2EB1AL46 878 aaPredicted RBP22.5■■□□□ 1.19
PSMD4-211ENST00000476855 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
PSMD4-211ENST00000476855 NUTM2AQ8IVF1 878 aaPredicted RBP22.5■■□□□ 1.19
PSMD4-211ENST00000476855 CARD11Q9BXL7 1154 aa22.5■■□□□ 1.19
PSMD4-211ENST00000476855 METP08581 1390 aa22.49■■□□□ 1.19
PSMD4-211ENST00000476855 CDK12Q9NYV4 1490 aaPredicted RBP22.48■■□□□ 1.19
PSMD4-211ENST00000476855 QRICH2Q9H0J4 1663 aa22.48■■□□□ 1.19
PSMD4-211ENST00000476855 USP47Q96K76 1375 aa22.48■■□□□ 1.19
PSMD4-211ENST00000476855 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
PSMD4-211ENST00000476855 TMEM132EQ6IEE7 984 aa22.47■■□□□ 1.19
PSMD4-211ENST00000476855 AMOTL2Q9Y2J4 779 aa22.47■■□□□ 1.19
PSMD4-211ENST00000476855 DLC1Q96QB1 1528 aa22.47■■□□□ 1.19
PSMD4-211ENST00000476855 AFF2P51816 1311 aa22.45■■□□□ 1.18
PSMD4-211ENST00000476855 PTPRUQ92729 1446 aa22.45■■□□□ 1.18
PSMD4-211ENST00000476855 SRCAPQ6ZRS2 3230 aa22.44■■□□□ 1.18
PSMD4-211ENST00000476855 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
PSMD4-211ENST00000476855 TECPR2O15040 1411 aa22.43■■□□□ 1.18
PSMD4-211ENST00000476855 DCCP43146 1447 aa22.43■■□□□ 1.18
PSMD4-211ENST00000476855 HSPA5P11021 654 aaKnown RBP22.42■■□□□ 1.18
PSMD4-211ENST00000476855 EIF4G2P78344 907 aaKnown RBP eCLIP22.42■■□□□ 1.18
PSMD4-211ENST00000476855 ABCC11Q96J66 1382 aa22.39■■□□□ 1.18
PSMD4-211ENST00000476855 LRRC59Q96AG4 307 aaKnown RBP22.39■■□□□ 1.17
PSMD4-211ENST00000476855 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
PSMD4-211ENST00000476855 C8orf37Q96NL8 207 aa22.37■■□□□ 1.17
PSMD4-211ENST00000476855 QTRT2Q9H974 415 aaKnown RBP22.37■■□□□ 1.17
PSMD4-211ENST00000476855 TRAK1Q9UPV9 953 aa22.37■■□□□ 1.17
PSMD4-211ENST00000476855 MST1RQ04912 1400 aa22.37■■□□□ 1.17
PSMD4-211ENST00000476855 RBM6P78332 1123 aaKnown RBP22.36■■□□□ 1.17
PSMD4-211ENST00000476855 RGS12O14924 1447 aa22.35■■□□□ 1.17
PSMD4-211ENST00000476855 PTCH1Q13635 1447 aa22.35■■□□□ 1.17
PSMD4-211ENST00000476855 ST20-MTHFSA0A0A6YYL1 179 aa22.34■■□□□ 1.17
PSMD4-211ENST00000476855 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
PSMD4-211ENST00000476855 STK26Q9P289 416 aa22.34■■□□□ 1.17
PSMD4-211ENST00000476855 NHSL1Q5SYE7 1610 aa22.34■■□□□ 1.17
PSMD4-211ENST00000476855 PNPLA6Q8IY17 1366 aa22.32■■□□□ 1.16
PSMD4-211ENST00000476855 ROBO2Q9HCK4 1378 aa22.32■■□□□ 1.16
PSMD4-211ENST00000476855 SBNO2Q9Y2G9 1366 aa22.32■■□□□ 1.16
PSMD4-211ENST00000476855 DDX17Q92841 729 aaKnown RBP22.31■■□□□ 1.16
PSMD4-211ENST00000476855 SIRT1Q96EB6 747 aa22.31■■□□□ 1.16
PSMD4-211ENST00000476855 TESK2Q96S53 571 aa22.31■■□□□ 1.16
PSMD4-211ENST00000476855 CENPJQ9HC77 1338 aaPredicted RBP22.31■■□□□ 1.16
PSMD4-211ENST00000476855 NALCNQ8IZF0 1738 aa22.3■■□□□ 1.16
PSMD4-211ENST00000476855 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
PSMD4-211ENST00000476855 PLEKHH1Q9ULM0 1364 aa22.29■■□□□ 1.16
PSMD4-211ENST00000476855 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
PSMD4-211ENST00000476855 NGLY1Q96IV0 654 aa22.28■■□□□ 1.16
PSMD4-211ENST00000476855 TULP4Q9NRJ4 1543 aa22.27■■□□□ 1.16
PSMD4-211ENST00000476855 PRAM1Q96QH2 718 aa22.27■■□□□ 1.16
PSMD4-211ENST00000476855 ADGRL3Q9HAR2 1447 aa22.27■■□□□ 1.16
PSMD4-211ENST00000476855 ADAMTS2O95450 1211 aa22.26■■□□□ 1.15
PSMD4-211ENST00000476855 MYOM1P52179 1685 aa22.24■■□□□ 1.15
PSMD4-211ENST00000476855 WAPLQ7Z5K2 1190 aa22.24■■□□□ 1.15
PSMD4-211ENST00000476855 ATAD2Q6PL18 1390 aa22.24■■□□□ 1.15
PSMD4-211ENST00000476855 C11orf95C9JLR9 678 aaPredicted RBP22.23■■□□□ 1.15
PSMD4-211ENST00000476855 POGKQ9P215 609 aa22.21■■□□□ 1.15
PSMD4-211ENST00000476855 USP21Q9UK80 565 aa22.2■■□□□ 1.14
PSMD4-211ENST00000476855 C1orf167Q5SNV9 1468 aa22.2■■□□□ 1.14
PSMD4-211ENST00000476855 FMN2Q9NZ56 1722 aa22.2■■□□□ 1.14
PSMD4-211ENST00000476855 SAFB2Q14151 953 aaKnown RBP eCLIP22.19■■□□□ 1.14
PSMD4-211ENST00000476855 CCDC7Q96M83 1385 aa22.19■■□□□ 1.14
PSMD4-211ENST00000476855 RGPD8O14715 1765 aaPredicted RBP22.19■■□□□ 1.14
PSMD4-211ENST00000476855 CDC42BPGQ6DT37 1551 aa22.18■■□□□ 1.14
PSMD4-211ENST00000476855 WASHC2AQ641Q2 1341 aa22.18■■□□□ 1.14
PSMD4-211ENST00000476855 TRPC5Q9UL62 973 aaPredicted RBP22.18■■□□□ 1.14
PSMD4-211ENST00000476855 SOS2Q07890 1332 aaPredicted RBP22.17■■□□□ 1.14
PSMD4-211ENST00000476855 KIF7Q2M1P5 1343 aa22.17■■□□□ 1.14
PSMD4-211ENST00000476855 MINK1Q8N4C8 1332 aaPredicted RBP22.17■■□□□ 1.14
PSMD4-211ENST00000476855 TMF1P82094 1093 aa22.17■■□□□ 1.14
PSMD4-211ENST00000476855 SLC24A1O60721 1099 aa22.16■■□□□ 1.14
PSMD4-211ENST00000476855 FNBP4Q8N3X1 1017 aaPredicted RBP22.16■■□□□ 1.14
PSMD4-211ENST00000476855 ZRANB1Q9UGI0 708 aa22.16■■□□□ 1.14
PSMD4-211ENST00000476855 TOPAZ1Q8N9V7 1692 aa22.16■■□□□ 1.14
PSMD4-211ENST00000476855 USP32Q8NFA0 1604 aa22.16■■□□□ 1.14
PSMD4-211ENST00000476855 EP400Q96L91 3159 aa22.15■■□□□ 1.14
PSMD4-211ENST00000476855 ORAI2Q96SN7 254 aa22.15■■□□□ 1.14
PSMD4-211ENST00000476855 ITSN1Q15811 1721 aa22.14■■□□□ 1.14
PSMD4-211ENST00000476855 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
PSMD4-211ENST00000476855 ATRNO75882 1429 aa22.11■■□□□ 1.13
PSMD4-211ENST00000476855 CCDC125Q86Z20 511 aa22.09■■□□□ 1.13
PSMD4-211ENST00000476855 WASLO00401 505 aaPredicted RBP22.08■■□□□ 1.13
PSMD4-211ENST00000476855 PUS7Q96PZ0 661 aaKnown RBP22.08■■□□□ 1.13
PSMD4-211ENST00000476855 ATP7BP35670 1465 aa22.08■■□□□ 1.12
PSMD4-211ENST00000476855 AKAP12Q02952 1782 aa22.07■■□□□ 1.12
PSMD4-211ENST00000476855 CDCA8Q53HL2 280 aa22.07■■□□□ 1.12
PSMD4-211ENST00000476855 CDK19Q9BWU1 502 aa22.06■■□□□ 1.12
PSMD4-211ENST00000476855 COL22A1Q8NFW1 1626 aaPredicted RBP22.06■■□□□ 1.12
PSMD4-211ENST00000476855 CABP2Q9NPB3 220 aa22.04■■□□□ 1.12
PSMD4-211ENST00000476855 BCL9LQ86UU0 1499 aa22.03■■□□□ 1.12
PSMD4-211ENST00000476855 NPHP3Q7Z494 1330 aa22.03■■□□□ 1.12
PSMD4-211ENST00000476855 ANKARQ7Z5J8 1434 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms