RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 TSPYL4Q9UJ04 414 aa8.11□□□□□ -1.11
TTC3-215ENST00000476784 HOOK1Q9UJC3 728 aaKnown RBP8.11□□□□□ -1.11
TTC3-215ENST00000476784 RB1CC1Q8TDY2 1594 aa8.11□□□□□ -1.11
TTC3-215ENST00000476784 PHF14O94880 888 aa8.11□□□□□ -1.11
TTC3-215ENST00000476784 CECR2Q9BXF3 1484 aa8.11□□□□□ -1.11
TTC3-215ENST00000476784 BCL2L13Q9BXK5 485 aa8.11□□□□□ -1.11
TTC3-215ENST00000476784 XBP1P17861 261 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 ANKRD45Q5TZF3 282 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 UBAP1LF5GYI3 381 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 ST18O60284 1047 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 TATP17735 454 aaPredicted RBP8.1□□□□□ -1.11
TTC3-215ENST00000476784 MIER1Q8N108 512 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 ZNF622Q969S3 477 aaKnown RBP eCLIP8.1□□□□□ -1.119e-7■■□□□ 12.6
TTC3-215ENST00000476784 RUFY2Q8WXA3 655 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 MPHOSPH8Q99549 860 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 CCDC180Q9P1Z9 1646 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 USP5P45974 858 aa8.1□□□□□ -1.11
TTC3-215ENST00000476784 SPINK5Q9NQ38 1064 aaPredicted RBP8.1□□□□□ -1.11
TTC3-215ENST00000476784 CRACR2BQ8N4Y2 399 aaPredicted RBP8.09□□□□□ -1.11
TTC3-215ENST00000476784 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
TTC3-215ENST00000476784 TTC39AQ5SRH9 613 aa8.09□□□□□ -1.11
TTC3-215ENST00000476784 EVC2Q86UK5 1308 aa8.09□□□□□ -1.11
TTC3-215ENST00000476784 ZKSCAN1P17029 563 aaPredicted RBP8.09□□□□□ -1.11
TTC3-215ENST00000476784 KCNA4P22459 653 aa8.08□□□□□ -1.12
TTC3-215ENST00000476784 SETQ01105 290 aaPredicted RBP8.08□□□□□ -1.12
TTC3-215ENST00000476784 HMOX1P09601 288 aa8.08□□□□□ -1.12
TTC3-215ENST00000476784 DESP17661 470 aa8.08□□□□□ -1.12
TTC3-215ENST00000476784 TTLL5Q6EMB2 1281 aa8.08□□□□□ -1.12
TTC3-215ENST00000476784 CCDC173Q0VFZ6 552 aa8.08□□□□□ -1.12
TTC3-215ENST00000476784 ERC1Q8IUD2 1116 aa8.08□□□□□ -1.12
TTC3-215ENST00000476784 PIBF1Q8WXW3 757 aa8.08□□□□□ -1.12
TTC3-215ENST00000476784 UQCRHP07919 91 aa8.08□□□□□ -1.12
TTC3-215ENST00000476784 TRMT1LQ7Z2T5 733 aaKnown RBP8.08□□□□□ -1.12
TTC3-215ENST00000476784 LIG1P18858 919 aa8.07□□□□□ -1.12
TTC3-215ENST00000476784 ANKIB1Q9P2G1 1089 aa8.07□□□□□ -1.12
TTC3-215ENST00000476784 TDRD9Q8NDG6 1382 aaKnown RBP8.07□□□□□ -1.12
TTC3-215ENST00000476784 ZNF592Q92610 1267 aa8.07□□□□□ -1.12
TTC3-215ENST00000476784 BICD2Q8TD16 824 aa8.07□□□□□ -1.12
TTC3-215ENST00000476784 SEPT11Q9NVA2 429 aaKnown RBP8.07□□□□□ -1.12
TTC3-215ENST00000476784 PDS5BQ9NTI5 1447 aa8.07□□□□□ -1.12
TTC3-215ENST00000476784 PPP4R3AQ6IN85 833 aa8.07□□□□□ -1.12
TTC3-215ENST00000476784 ZNF408Q9H9D4 720 aa8.07□□□□□ -1.12
TTC3-215ENST00000476784 COMMD10Q9Y6G5 202 aa8.07□□□□□ -1.12
TTC3-215ENST00000476784 SSBP05455 408 aaKnown RBP eCLIP8.07□□□□□ -1.12
TTC3-215ENST00000476784 HMGN5P82970 282 aaKnown RBP8.07□□□□□ -1.12
TTC3-215ENST00000476784 CUX2O14529 1486 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 SSR1P43307 286 aaKnown RBP8.06□□□□□ -1.12
TTC3-215ENST00000476784 MYL6BP14649 208 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 POLD1P28340 1107 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 RNF20Q5VTR2 975 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 JPH4Q96JJ6 628 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 HMGB2P26583 209 aaKnown RBP8.06□□□□□ -1.12
TTC3-215ENST00000476784 SOGA3Q5TF21 947 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 LRSAM1Q6UWE0 723 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 RPGRQ92834 1020 aaKnown RBP8.06□□□□□ -1.12
TTC3-215ENST00000476784 ANKRD30AQ9BXX3 1397 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 CCDC85AQ96PX6 553 aaPredicted RBP8.06□□□□□ -1.12
TTC3-215ENST00000476784 DNAI2Q9GZS0 605 aa8.06□□□□□ -1.12
TTC3-215ENST00000476784 GRIPAP1Q4V328 841 aa8.05□□□□□ -1.12
TTC3-215ENST00000476784 RUFY1Q96T51 708 aa8.05□□□□□ -1.12
TTC3-215ENST00000476784 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
TTC3-215ENST00000476784 CIZ1Q9ULV3 898 aaPredicted RBP8.05□□□□□ -1.12
TTC3-215ENST00000476784 CENPJQ9HC77 1338 aaPredicted RBP8.05□□□□□ -1.12
TTC3-215ENST00000476784 ANKLE2Q86XL3 938 aa8.05□□□□□ -1.12
TTC3-215ENST00000476784 UQCRHLA0A096LP55 91 aa8.05□□□□□ -1.12
TTC3-215ENST00000476784 NBPF8Q3BBV2 869 aa8.05□□□□□ -1.12
TTC3-215ENST00000476784 NBPF14Q5TI25 921 aa8.05□□□□□ -1.12
TTC3-215ENST00000476784 FEZ1Q99689 392 aa8.04□□□□□ -1.12
TTC3-215ENST00000476784 WRNQ14191 1432 aaPredicted RBP eCLIP8.04□□□□□ -1.12
TTC3-215ENST00000476784 CARMIL1Q5VZK9 1371 aa8.04□□□□□ -1.12
TTC3-215ENST00000476784 ZC3H6P61129 1189 aaKnown RBP8.04□□□□□ -1.12
TTC3-215ENST00000476784 PLEKHO1Q53GL0 409 aaPredicted RBP8.04□□□□□ -1.12
TTC3-215ENST00000476784 CGNL1Q0VF96 1302 aa8.04□□□□□ -1.12
TTC3-215ENST00000476784 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
TTC3-215ENST00000476784 SEPT7Q16181 437 aaKnown RBP8.04□□□□□ -1.12
TTC3-215ENST00000476784 RAI14Q9P0K7 980 aa8.04□□□□□ -1.12
TTC3-215ENST00000476784 VPS37CA5D8V6 355 aaPredicted RBP8.04□□□□□ -1.12
TTC3-215ENST00000476784 PTMSP20962 102 aa8.04□□□□□ -1.12
TTC3-215ENST00000476784 PDILTQ8N807 584 aa8.03□□□□□ -1.12
TTC3-215ENST00000476784 ZRSR2Q15696 482 aaKnown RBP8.03□□□□□ -1.12
TTC3-215ENST00000476784 NUP133Q8WUM0 1156 aa8.03□□□□□ -1.12
TTC3-215ENST00000476784 TANGO6Q9C0B7 1094 aa8.03□□□□□ -1.12
TTC3-215ENST00000476784 SMG6Q86US8 1419 aaKnown RBP8.03□□□□□ -1.12
TTC3-215ENST00000476784 DIAPH1O60610 1272 aaKnown RBP8.03□□□□□ -1.12
TTC3-215ENST00000476784 CCDC158Q5M9N0 1113 aa8.03□□□□□ -1.12
TTC3-215ENST00000476784 ZNF354CQ86Y25 554 aa8.03□□□□□ -1.12
TTC3-215ENST00000476784 THEMISQ8N1K5 641 aaPredicted RBP8.03□□□□□ -1.12
TTC3-215ENST00000476784 HSPA5P11021 654 aaKnown RBP8.03□□□□□ -1.12
TTC3-215ENST00000476784 MRPS9P82933 396 aaKnown RBP8.03□□□□□ -1.12
TTC3-215ENST00000476784 TNIP1Q15025 636 aa8.03□□□□□ -1.12
TTC3-215ENST00000476784 RBM26Q5T8P6 1007 aaKnown RBP8.03□□□□□ -1.12
TTC3-215ENST00000476784 CCDC181Q5TID7 509 aa8.03□□□□□ -1.12
TTC3-215ENST00000476784 CAGE1Q8TC20 777 aa8.03□□□□□ -1.12
TTC3-215ENST00000476784 C6orf229H3BNL8 230 aa8.02□□□□□ -1.12
TTC3-215ENST00000476784 TXLNAP40222 546 aa8.02□□□□□ -1.12
TTC3-215ENST00000476784 BIRC2Q13490 618 aa8.02□□□□□ -1.12
TTC3-215ENST00000476784 MAGEC2Q9UBF1 373 aaPredicted RBP8.02□□□□□ -1.13
TTC3-215ENST00000476784 PABPN1LA6NDY0 278 aaKnown RBP8.02□□□□□ -1.13
TTC3-215ENST00000476784 FAM161AQ3B820 660 aa8.02□□□□□ -1.13
TTC3-215ENST00000476784 SPG7Q9UQ90 795 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms