RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
BRCA1-213ENST00000476777 COL22A1Q8NFW1 1626 aaPredicted RBP17.37■□□□□ 0.37
BRCA1-213ENST00000476777 MYOM2P54296 1465 aa17.37■□□□□ 0.37
BRCA1-213ENST00000476777 VGFO15240 615 aaPredicted RBP17.36■□□□□ 0.37
BRCA1-213ENST00000476777 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
BRCA1-213ENST00000476777 KIF1BO60333 1816 aa17.35■□□□□ 0.37
BRCA1-213ENST00000476777 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
BRCA1-213ENST00000476777 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
BRCA1-213ENST00000476777 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
BRCA1-213ENST00000476777 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
BRCA1-213ENST00000476777 GJD4Q96KN9 370 aaPredicted RBP17.32■□□□□ 0.36
BRCA1-213ENST00000476777 PXDNQ92626 1479 aa17.31■□□□□ 0.36
BRCA1-213ENST00000476777 RPGRIP1LQ68CZ1 1315 aa17.31■□□□□ 0.36
BRCA1-213ENST00000476777 FOXO3O43524 673 aa17.3■□□□□ 0.36
BRCA1-213ENST00000476777 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
BRCA1-213ENST00000476777 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
BRCA1-213ENST00000476777 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
BRCA1-213ENST00000476777 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.36
BRCA1-213ENST00000476777 UNC5CLQ8IV45 518 aa17.26■□□□□ 0.35
BRCA1-213ENST00000476777 NAIPQ13075 1403 aa17.26■□□□□ 0.35
BRCA1-213ENST00000476777 LRPPRCP42704 1394 aaKnown RBP17.25■□□□□ 0.35
BRCA1-213ENST00000476777 PPLO60437 1756 aa17.25■□□□□ 0.35
BRCA1-213ENST00000476777 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
BRCA1-213ENST00000476777 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
BRCA1-213ENST00000476777 SLIT2O94813 1529 aa17.24■□□□□ 0.35
BRCA1-213ENST00000476777 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.24■□□□□ 0.35
BRCA1-213ENST00000476777 GLI3P10071 1580 aa17.23■□□□□ 0.35
BRCA1-213ENST00000476777 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
BRCA1-213ENST00000476777 WAPLQ7Z5K2 1190 aa17.23■□□□□ 0.35
BRCA1-213ENST00000476777 DEFB132Q7Z7B7 95 aa17.22■□□□□ 0.35
BRCA1-213ENST00000476777 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.35
BRCA1-213ENST00000476777 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.35
BRCA1-213ENST00000476777 TECPR2O15040 1411 aa17.21■□□□□ 0.35
BRCA1-213ENST00000476777 STK26Q9P289 416 aa17.21■□□□□ 0.35
BRCA1-213ENST00000476777 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
BRCA1-213ENST00000476777 BRWD3Q6RI45 1802 aa17.19■□□□□ 0.34
BRCA1-213ENST00000476777 ABCC11Q96J66 1382 aa17.18■□□□□ 0.34
BRCA1-213ENST00000476777 PLEKHH1Q9ULM0 1364 aa17.18■□□□□ 0.34
BRCA1-213ENST00000476777 SEPT12Q8IYM1 358 aa17.18■□□□□ 0.34
BRCA1-213ENST00000476777 RRBP1Q9P2E9 1410 aaKnown RBP17.18■□□□□ 0.34
BRCA1-213ENST00000476777 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
BRCA1-213ENST00000476777 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
BRCA1-213ENST00000476777 USP32Q8NFA0 1604 aa17.17■□□□□ 0.34
BRCA1-213ENST00000476777 ONECUT3O60422 494 aaPredicted RBP17.16■□□□□ 0.34
BRCA1-213ENST00000476777 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
BRCA1-213ENST00000476777 VPS72Q15906 364 aa17.16■□□□□ 0.34
BRCA1-213ENST00000476777 TMEM132EQ6IEE7 984 aa17.15■□□□□ 0.34
BRCA1-213ENST00000476777 KIF1AQ12756 1690 aa17.14■□□□□ 0.33
BRCA1-213ENST00000476777 FMN2Q9NZ56 1722 aa17.14■□□□□ 0.33
BRCA1-213ENST00000476777 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
BRCA1-213ENST00000476777 CABLES1Q8TDN4 633 aa17.13■□□□□ 0.33
BRCA1-213ENST00000476777 ANKRD30BQ9BXX2 1392 aa17.13■□□□□ 0.33
BRCA1-213ENST00000476777 KNDC1Q76NI1 1749 aa17.13■□□□□ 0.33
BRCA1-213ENST00000476777 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
BRCA1-213ENST00000476777 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
BRCA1-213ENST00000476777 LRP5O75197 1615 aa17.12■□□□□ 0.33
BRCA1-213ENST00000476777 HAP1P54257 671 aaPredicted RBP17.12■□□□□ 0.33
BRCA1-213ENST00000476777 KRT27Q7Z3Y8 459 aa17.12■□□□□ 0.33
BRCA1-213ENST00000476777 PHF8Q9UPP1 1060 aa17.11■□□□□ 0.33
BRCA1-213ENST00000476777 PIK3C2GO75747 1445 aa17.11■□□□□ 0.33
BRCA1-213ENST00000476777 YTHDC2Q9H6S0 1430 aaKnown RBP17.11■□□□□ 0.33
BRCA1-213ENST00000476777 PSME1Q06323 249 aa17.1■□□□□ 0.33
BRCA1-213ENST00000476777 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
BRCA1-213ENST00000476777 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
BRCA1-213ENST00000476777 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
BRCA1-213ENST00000476777 PLEKHG5O94827 1062 aa17.09■□□□□ 0.33
BRCA1-213ENST00000476777 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
BRCA1-213ENST00000476777 PLCH1Q4KWH8 1693 aa17.09■□□□□ 0.33
BRCA1-213ENST00000476777 RGPD8O14715 1765 aaPredicted RBP17.09■□□□□ 0.33
BRCA1-213ENST00000476777 IFT172Q9UG01 1749 aa17.08■□□□□ 0.32
BRCA1-213ENST00000476777 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.32
BRCA1-213ENST00000476777 FAM83GA6ND36 823 aa17.08■□□□□ 0.32
BRCA1-213ENST00000476777 NRXN1Q9ULB1 1477 aa17.07■□□□□ 0.32
BRCA1-213ENST00000476777 HRCP23327 699 aa17.07■□□□□ 0.32
BRCA1-213ENST00000476777 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
BRCA1-213ENST00000476777 BAG6P46379 1132 aa17.06■□□□□ 0.32
BRCA1-213ENST00000476777 LMOD2Q6P5Q4 547 aa17.06■□□□□ 0.32
BRCA1-213ENST00000476777 ABCA3Q99758 1704 aa17.05■□□□□ 0.32
BRCA1-213ENST00000476777 C14orf93Q9H972 538 aaKnown RBP17.05■□□□□ 0.32
BRCA1-213ENST00000476777 FAM98CQ17RN3 349 aaKnown RBP17.04■□□□□ 0.32
BRCA1-213ENST00000476777 A0A0G2JS52 829 aa17.03■□□□□ 0.32
BRCA1-213ENST00000476777 MYT1Q01538 1121 aa17.03■□□□□ 0.32
BRCA1-213ENST00000476777 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
BRCA1-213ENST00000476777 EN1Q05925 392 aaPredicted RBP17.01■□□□□ 0.31
BRCA1-213ENST00000476777 SAFB2Q14151 953 aaKnown RBP eCLIP17.01■□□□□ 0.31
BRCA1-213ENST00000476777 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
BRCA1-213ENST00000476777 PRAM1Q96QH2 718 aa17.01■□□□□ 0.31
BRCA1-213ENST00000476777 BTG4Q9NY30 223 aa17.01■□□□□ 0.31
BRCA1-213ENST00000476777 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
BRCA1-213ENST00000476777 DHX57Q6P158 1386 aaKnown RBP17.01■□□□□ 0.31
BRCA1-213ENST00000476777 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
BRCA1-213ENST00000476777 ANKARQ7Z5J8 1434 aa16.99■□□□□ 0.31
BRCA1-213ENST00000476777 FAM182BQ5T319 152 aa16.98■□□□□ 0.31
BRCA1-213ENST00000476777 SPATA31A5Q5VU36 1347 aa16.97■□□□□ 0.31
BRCA1-213ENST00000476777 SPATA31A7Q8IWB4 1347 aa16.97■□□□□ 0.31
BRCA1-213ENST00000476777 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
BRCA1-213ENST00000476777 DISP2A7MBM2 1401 aa16.96■□□□□ 0.31
BRCA1-213ENST00000476777 TRPM3Q9HCF6 1732 aaPredicted RBP16.96■□□□□ 0.31
BRCA1-213ENST00000476777 POGKQ9P215 609 aa16.96■□□□□ 0.31
BRCA1-213ENST00000476777 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms