RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 COPB2P35606 906 aa4.75□□□□□ -1.65
LSM2-211ENST00000475835 FOXD4Q12950 439 aaPredicted RBP4.75□□□□□ -1.65
LSM2-211ENST00000475835 PUS10Q3MIT2 529 aaKnown RBP4.75□□□□□ -1.65
LSM2-211ENST00000475835 RPAINQ86UA6 219 aa4.75□□□□□ -1.65
LSM2-211ENST00000475835 MPNDQ8N594 471 aa4.75□□□□□ -1.65
LSM2-211ENST00000475835 JMYQ8N9B5 988 aa4.75□□□□□ -1.65
LSM2-211ENST00000475835 FRAT1Q92837 279 aaPredicted RBP4.75□□□□□ -1.65
LSM2-211ENST00000475835 NUCKS1Q9H1E3 243 aaKnown RBP4.75□□□□□ -1.65
LSM2-211ENST00000475835 MED4Q9NPJ6 270 aa4.75□□□□□ -1.65
LSM2-211ENST00000475835 RBM27Q9P2N5 1060 aaKnown RBP4.75□□□□□ -1.65
LSM2-211ENST00000475835 PAXBP1Q9Y5B6 917 aa4.75□□□□□ -1.65
LSM2-211ENST00000475835 ZBED9Q6R2W3 1325 aa4.74□□□□□ -1.65
LSM2-211ENST00000475835 TULP2O00295 520 aa4.74□□□□□ -1.65
LSM2-211ENST00000475835 MPHOSPH10O00566 681 aaKnown RBP4.74□□□□□ -1.65
LSM2-211ENST00000475835 PPP1R12AO14974 1030 aaPredicted RBP4.74□□□□□ -1.65
LSM2-211ENST00000475835 PSMC1P62191 440 aaKnown RBP4.74□□□□□ -1.65
LSM2-211ENST00000475835 CT47A1Q5JQC4 288 aaPredicted RBP4.74□□□□□ -1.65
LSM2-211ENST00000475835 ZFYVE27Q5T4F4 411 aa4.74□□□□□ -1.65
LSM2-211ENST00000475835 SMC5Q8IY18 1101 aa4.74□□□□□ -1.65
LSM2-211ENST00000475835 ERCC4Q92889 916 aaPredicted RBP4.74□□□□□ -1.65
LSM2-211ENST00000475835 KDM4CQ9H3R0 1056 aa4.74□□□□□ -1.65
LSM2-211ENST00000475835 PPP4R2Q9NY27 417 aa4.74□□□□□ -1.65
LSM2-211ENST00000475835 FAM13BQ9NYF5 915 aa4.74□□□□□ -1.65
LSM2-211ENST00000475835 ARAP1Q96P48 1450 aa4.74□□□□□ -1.65
LSM2-211ENST00000475835 CFAP43Q8NDM7 1665 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 CCDC196A0A1B0GTZ2 297 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 EPB41L2O43491 1005 aaKnown RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 SETSIPP0DME0 302 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 TDO2P48775 406 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 SARNPP82979 210 aaKnown RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 C11orf91Q3C1V1 193 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 TBC1D10BQ4KMP7 808 aaPredicted RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 HSP90AB2PQ58FF8 381 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 ZC3H12AQ5D1E8 599 aaKnown RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 SWT1Q5T5J6 900 aaKnown RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 CLEC4GQ6UXB4 293 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 GET4Q7L5D6 327 aaPredicted RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 P3H3Q8IVL6 736 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 TIGD1Q96MW7 591 aa4.73□□□□□ -1.65
LSM2-211ENST00000475835 RANBP17Q9H2T7 1088 aaKnown RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 SPINK5Q9NQ38 1064 aaPredicted RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 ZBTB12Q9Y330 459 aaPredicted RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 DHX57Q6P158 1386 aaKnown RBP4.73□□□□□ -1.65
LSM2-211ENST00000475835 RPGRIP1LQ68CZ1 1315 aa4.72□□□□□ -1.65
LSM2-211ENST00000475835 ANKRD62A6NC57 917 aa4.72□□□□□ -1.65
LSM2-211ENST00000475835 RIOK3O14730 519 aaKnown RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 NPM3O75607 178 aaKnown RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 EIF3JO75822 258 aaKnown RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 GABPB1Q06547 395 aaPredicted RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 SF3B2Q13435 895 aaKnown RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 RGL3Q3MIN7 710 aa4.72□□□□□ -1.65
LSM2-211ENST00000475835 C1QTNF12Q5T7M4 302 aa4.72□□□□□ -1.65
LSM2-211ENST00000475835 KLHL10Q6JEL2 608 aa4.72□□□□□ -1.65
LSM2-211ENST00000475835 DNAJC14Q6Y2X3 702 aaPredicted RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 DCAF11Q8TEB1 546 aa4.72□□□□□ -1.65
LSM2-211ENST00000475835 TMX4Q9H1E5 349 aaPredicted RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 CWC25Q9NXE8 425 aaPredicted RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 CALCOCO1Q9P1Z2 691 aa4.72□□□□□ -1.65
LSM2-211ENST00000475835 CGNQ9P2M7 1197 aaKnown RBP4.72□□□□□ -1.65
LSM2-211ENST00000475835 ATAD2BQ9ULI0 1458 aa4.72□□□□□ -1.65
LSM2-211ENST00000475835 CUX2O14529 1486 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 CCP110O43303 1012 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 PAX7P23759 505 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 KIAA2012Q0VF49 1180 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 NEXNQ0ZGT2 675 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 MAMSTRQ6ZN01 415 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 KIAA1211Q6ZU35 1233 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 PIAS4Q8N2W9 510 aaPredicted RBP4.71□□□□□ -1.66
LSM2-211ENST00000475835 OGFOD1Q8N543 542 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 SIRT1Q96EB6 747 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 CALR3Q96L12 384 aaKnown RBP4.71□□□□□ -1.66
LSM2-211ENST00000475835 SLC26A8Q96RN1 970 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 TEX13AQ9BXU3 409 aaPredicted RBP4.71□□□□□ -1.66
LSM2-211ENST00000475835 MAF1Q9H063 256 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 METTL14Q9HCE5 456 aaKnown RBP4.71□□□□□ -1.66
LSM2-211ENST00000475835 ARHGEF10LQ9HCE6 1279 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 STK26Q9P289 416 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 RRBP1Q9P2E9 1410 aaKnown RBP4.71□□□□□ -1.66
LSM2-211ENST00000475835 IL16Q14005 1332 aa4.71□□□□□ -1.66
LSM2-211ENST00000475835 TIAM1Q13009 1591 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 SMAPO00193 183 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 SH3BP5O60239 455 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 PPFIA4O75335 1185 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 OFD1O75665 1012 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 TPM3P06753 285 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 PRR29P0C7W0 189 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 HSPA5P11021 654 aaKnown RBP4.7□□□□□ -1.66
LSM2-211ENST00000475835 CASQ1P31415 396 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 RHBDL3P58872 404 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 PKD2Q13563 968 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 LRCH2Q5VUJ6 765 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 DZIP3Q86Y13 1208 aaKnown RBP4.7□□□□□ -1.66
LSM2-211ENST00000475835 PROCA1Q8NCQ7 364 aaPredicted RBP4.7□□□□□ -1.66
LSM2-211ENST00000475835 FBXW7Q969H0 707 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 BORCS6Q96GS4 357 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 TACO1Q9BSH4 297 aaKnown RBP4.7□□□□□ -1.66
LSM2-211ENST00000475835 COMMD10Q9Y6G5 202 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 HMGXB3Q12766 1538 aa4.7□□□□□ -1.66
LSM2-211ENST00000475835 PRXQ9BXM0 1461 aa4.69□□□□□ -1.66
LSM2-211ENST00000475835 BICDL2A1A5D9 508 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms