RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ADGRB2O60241 1585 aa18.81■□□□□ 0.6
TRAF4-210ENST00000475329 MINK1Q8N4C8 1332 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-210ENST00000475329 PLEKHH1Q9ULM0 1364 aa18.8■□□□□ 0.6
TRAF4-210ENST00000475329 SLC26A8Q96RN1 970 aa18.79■□□□□ 0.6
TRAF4-210ENST00000475329 PTPRUQ92729 1446 aa18.79■□□□□ 0.6
TRAF4-210ENST00000475329 PIK3R4Q99570 1358 aa18.79■□□□□ 0.6
TRAF4-210ENST00000475329 USP32Q8NFA0 1604 aa18.78■□□□□ 0.6
TRAF4-210ENST00000475329 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
TRAF4-210ENST00000475329 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-210ENST00000475329 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
TRAF4-210ENST00000475329 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
TRAF4-210ENST00000475329 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.59
TRAF4-210ENST00000475329 ROBO2Q9HCK4 1378 aa18.76■□□□□ 0.59
TRAF4-210ENST00000475329 NPHP4O75161 1426 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-210ENST00000475329 RALBP1Q15311 655 aa18.75■□□□□ 0.59
TRAF4-210ENST00000475329 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
TRAF4-210ENST00000475329 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
TRAF4-210ENST00000475329 PARD3Q8TEW0 1356 aa18.75■□□□□ 0.59
TRAF4-210ENST00000475329 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
TRAF4-210ENST00000475329 CABP2Q9NPB3 220 aa18.74■□□□□ 0.59
TRAF4-210ENST00000475329 KNSTRNQ9Y448 316 aa18.74■□□□□ 0.59
TRAF4-210ENST00000475329 ITSN1Q15811 1721 aa18.72■□□□□ 0.59
TRAF4-210ENST00000475329 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
TRAF4-210ENST00000475329 CNGB1Q14028 1251 aaPredicted RBP18.72■□□□□ 0.59
TRAF4-210ENST00000475329 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
TRAF4-210ENST00000475329 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
TRAF4-210ENST00000475329 TOPAZ1Q8N9V7 1692 aa18.71■□□□□ 0.59
TRAF4-210ENST00000475329 CDK19Q9BWU1 502 aa18.71■□□□□ 0.59
TRAF4-210ENST00000475329 AMOTL2Q9Y2J4 779 aa18.71■□□□□ 0.59
TRAF4-210ENST00000475329 MYBBP1AQ9BQG0 1328 aaKnown RBP18.71■□□□□ 0.59
TRAF4-210ENST00000475329 NWD1Q149M9 1564 aa18.7■□□□□ 0.58
TRAF4-210ENST00000475329 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
TRAF4-210ENST00000475329 NSD3Q9BZ95 1437 aa18.69■□□□□ 0.58
TRAF4-210ENST00000475329 KIF20BQ96Q89 1820 aa18.69■□□□□ 0.58
TRAF4-210ENST00000475329 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
TRAF4-210ENST00000475329 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
TRAF4-210ENST00000475329 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
TRAF4-210ENST00000475329 SLC12A5Q9H2X9 1139 aa18.68■□□□□ 0.58
TRAF4-210ENST00000475329 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
TRAF4-210ENST00000475329 ATP7BP35670 1465 aa18.68■□□□□ 0.58
TRAF4-210ENST00000475329 NALCNQ8IZF0 1738 aa18.67■□□□□ 0.58
TRAF4-210ENST00000475329 WASLO00401 505 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-210ENST00000475329 CENPBP07199 599 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-210ENST00000475329 BRD4O60885 1362 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-210ENST00000475329 MON2Q7Z3U7 1717 aa18.66■□□□□ 0.58
TRAF4-210ENST00000475329 CDC42BPGQ6DT37 1551 aa18.65■□□□□ 0.58
TRAF4-210ENST00000475329 CCDC184Q52MB2 194 aa18.65■□□□□ 0.58
TRAF4-210ENST00000475329 CARD14Q9BXL6 1004 aa18.65■□□□□ 0.58
TRAF4-210ENST00000475329 NCKAP5LQ9HCH0 1330 aa18.65■□□□□ 0.58
TRAF4-210ENST00000475329 FMN2Q9NZ56 1722 aa18.65■□□□□ 0.58
TRAF4-210ENST00000475329 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
TRAF4-210ENST00000475329 CD163L1Q9NR16 1453 aa18.65■□□□□ 0.58
TRAF4-210ENST00000475329 A0A1W2PP64 1363 aa18.64■□□□□ 0.57
TRAF4-210ENST00000475329 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
TRAF4-210ENST00000475329 TERF2IPQ9NYB0 399 aa18.63■□□□□ 0.57
TRAF4-210ENST00000475329 RGPD8O14715 1765 aaPredicted RBP18.63■□□□□ 0.57
TRAF4-210ENST00000475329 KCNA6P17658 529 aa18.62■□□□□ 0.57
TRAF4-210ENST00000475329 NSD2O96028 1365 aa18.62■□□□□ 0.57
TRAF4-210ENST00000475329 PPIP5K1Q6PFW1 1433 aa18.62■□□□□ 0.57
TRAF4-210ENST00000475329 CGNL1Q0VF96 1302 aa18.61■□□□□ 0.57
TRAF4-210ENST00000475329 HDGFL2Q7Z4V5 671 aaPredicted RBP18.61■□□□□ 0.57
TRAF4-210ENST00000475329 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
TRAF4-210ENST00000475329 NUDT16Q96DE0 195 aaKnown RBP18.59■□□□□ 0.57
TRAF4-210ENST00000475329 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.57
TRAF4-210ENST00000475329 CABP1Q9NZU7 370 aa18.58■□□□□ 0.56
TRAF4-210ENST00000475329 NRKQ7Z2Y5 1582 aa18.57■□□□□ 0.56
TRAF4-210ENST00000475329 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
TRAF4-210ENST00000475329 PRR36Q9H6K5 1346 aa18.56■□□□□ 0.56
TRAF4-210ENST00000475329 STRCP1A6NGW2 1772 aa18.56■□□□□ 0.56
TRAF4-210ENST00000475329 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
TRAF4-210ENST00000475329 ANKARQ7Z5J8 1434 aa18.56■□□□□ 0.56
TRAF4-210ENST00000475329 PPP2R1AP30153 589 aa18.55■□□□□ 0.56
TRAF4-210ENST00000475329 HSPA2P54652 639 aa18.55■□□□□ 0.56
TRAF4-210ENST00000475329 ADGRL3Q9HAR2 1447 aa18.55■□□□□ 0.56
TRAF4-210ENST00000475329 ILDR1Q86SU0 546 aaPredicted RBP18.54■□□□□ 0.56
TRAF4-210ENST00000475329 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
TRAF4-210ENST00000475329 EDC4Q6P2E9 1401 aaKnown RBP18.54■□□□□ 0.56
TRAF4-210ENST00000475329 MORC1Q86VD1 984 aa18.52■□□□□ 0.56
TRAF4-210ENST00000475329 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
TRAF4-210ENST00000475329 PLEKHG3A1L390 1219 aa18.48■□□□□ 0.55
TRAF4-210ENST00000475329 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
TRAF4-210ENST00000475329 HNRNPUQ00839 825 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRAF4-210ENST00000475329 ZNF692Q9BU19 519 aaPredicted RBP18.47■□□□□ 0.55
TRAF4-210ENST00000475329 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
TRAF4-210ENST00000475329 SHPRHQ149N8 1683 aa18.46■□□□□ 0.55
TRAF4-210ENST00000475329 POLR3AO14802 1390 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-210ENST00000475329 INSRP06213 1382 aa18.45■□□□□ 0.54
TRAF4-210ENST00000475329 XIRP1Q702N8 1843 aaKnown RBP18.45■□□□□ 0.54
TRAF4-210ENST00000475329 FYB1O15117 783 aa18.45■□□□□ 0.54
TRAF4-210ENST00000475329 USP6P35125 1406 aa18.45■□□□□ 0.54
TRAF4-210ENST00000475329 ACEP12821 1306 aa18.45■□□□□ 0.54
TRAF4-210ENST00000475329 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
TRAF4-210ENST00000475329 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
TRAF4-210ENST00000475329 PROSER2Q86WR7 435 aaPredicted RBP18.44■□□□□ 0.54
TRAF4-210ENST00000475329 GGNBP2Q9H3C7 697 aa18.44■□□□□ 0.54
TRAF4-210ENST00000475329 NCOA3Q9Y6Q9 1424 aa18.43■□□□□ 0.54
TRAF4-210ENST00000475329 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
TRAF4-210ENST00000475329 FBXO41Q8TF61 875 aa18.43■□□□□ 0.54
TRAF4-210ENST00000475329 KIF1AQ12756 1690 aa18.43■□□□□ 0.54
TRAF4-210ENST00000475329 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms