RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
RNF220-211ENST00000474956 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
RNF220-211ENST00000474956 NBR1Q14596 966 aa16.39■□□□□ 0.21
RNF220-211ENST00000474956 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
RNF220-211ENST00000474956 RPGRIP1LQ68CZ1 1315 aa16.39■□□□□ 0.21
RNF220-211ENST00000474956 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
RNF220-211ENST00000474956 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
RNF220-211ENST00000474956 NEUROD2Q15784 382 aa16.38■□□□□ 0.21
RNF220-211ENST00000474956 SBNO2Q9Y2G9 1366 aa16.38■□□□□ 0.21
RNF220-211ENST00000474956 MORC1Q86VD1 984 aa16.38■□□□□ 0.21
RNF220-211ENST00000474956 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
RNF220-211ENST00000474956 ZNF521Q96K83 1311 aa16.38■□□□□ 0.21
RNF220-211ENST00000474956 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
RNF220-211ENST00000474956 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
RNF220-211ENST00000474956 ARHGAP31Q2M1Z3 1444 aa16.37■□□□□ 0.21
RNF220-211ENST00000474956 PRAM1Q96QH2 718 aa16.36■□□□□ 0.21
RNF220-211ENST00000474956 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
RNF220-211ENST00000474956 SRPK2P78362 688 aaKnown RBP16.35■□□□□ 0.21
RNF220-211ENST00000474956 SLC52A1Q9NWF4 448 aa16.35■□□□□ 0.21
RNF220-211ENST00000474956 MTHFSP49914 203 aa16.34■□□□□ 0.21
RNF220-211ENST00000474956 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
RNF220-211ENST00000474956 CLTCQ00610 1675 aaKnown RBP16.33■□□□□ 0.2
RNF220-211ENST00000474956 EVC2Q86UK5 1308 aa16.32■□□□□ 0.2
RNF220-211ENST00000474956 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
RNF220-211ENST00000474956 WAPLQ7Z5K2 1190 aa16.32■□□□□ 0.2
RNF220-211ENST00000474956 TCERG1O14776 1098 aaKnown RBP16.32■□□□□ 0.2
RNF220-211ENST00000474956 FBLN1P23142 703 aa16.32■□□□□ 0.2
RNF220-211ENST00000474956 GGNBP2Q9H3C7 697 aa16.32■□□□□ 0.2
RNF220-211ENST00000474956 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
RNF220-211ENST00000474956 INSRP06213 1382 aa16.31■□□□□ 0.2
RNF220-211ENST00000474956 BCAR3O75815 825 aa16.3■□□□□ 0.2
RNF220-211ENST00000474956 A0A1W2PP64 1363 aa16.3■□□□□ 0.2
RNF220-211ENST00000474956 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
RNF220-211ENST00000474956 PTPRMP28827 1452 aa16.3■□□□□ 0.2
RNF220-211ENST00000474956 POGKQ9P215 609 aa16.3■□□□□ 0.2
RNF220-211ENST00000474956 YTHDC2Q9H6S0 1430 aaKnown RBP16.28■□□□□ 0.2
RNF220-211ENST00000474956 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
RNF220-211ENST00000474956 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
RNF220-211ENST00000474956 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
RNF220-211ENST00000474956 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
RNF220-211ENST00000474956 ALKQ9UM73 1620 aa16.26■□□□□ 0.19
RNF220-211ENST00000474956 MS4A1P11836 297 aa16.26■□□□□ 0.19
RNF220-211ENST00000474956 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
RNF220-211ENST00000474956 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
RNF220-211ENST00000474956 KIF13AQ9H1H9 1805 aa16.25■□□□□ 0.19
RNF220-211ENST00000474956 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
RNF220-211ENST00000474956 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
RNF220-211ENST00000474956 TRMT2AQ8IZ69 625 aaKnown RBP16.24■□□□□ 0.19
RNF220-211ENST00000474956 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
RNF220-211ENST00000474956 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
RNF220-211ENST00000474956 PDE4AP27815 886 aa16.24■□□□□ 0.19
RNF220-211ENST00000474956 ZFYVE9O95405 1425 aa16.24■□□□□ 0.19
RNF220-211ENST00000474956 A2ML1A8K2U0 1454 aa16.24■□□□□ 0.19
RNF220-211ENST00000474956 CD163L1Q9NR16 1453 aa16.23■□□□□ 0.19
RNF220-211ENST00000474956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
RNF220-211ENST00000474956 BACH2Q9BYV9 841 aa16.22■□□□□ 0.19
RNF220-211ENST00000474956 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
RNF220-211ENST00000474956 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
RNF220-211ENST00000474956 FYB1O15117 783 aa16.22■□□□□ 0.19
RNF220-211ENST00000474956 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
RNF220-211ENST00000474956 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
RNF220-211ENST00000474956 TNNQ9UQP3 1299 aa16.21■□□□□ 0.19
RNF220-211ENST00000474956 RIMS2Q9UQ26 1411 aa16.2■□□□□ 0.18
RNF220-211ENST00000474956 TXNDC2Q86VQ3 553 aa16.2■□□□□ 0.18
RNF220-211ENST00000474956 U2SURPO15042 1029 aaKnown RBP16.2■□□□□ 0.18
RNF220-211ENST00000474956 METP08581 1390 aa16.2■□□□□ 0.18
RNF220-211ENST00000474956 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
RNF220-211ENST00000474956 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
RNF220-211ENST00000474956 USP35Q9P2H5 1018 aa16.19■□□□□ 0.18
RNF220-211ENST00000474956 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
RNF220-211ENST00000474956 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
RNF220-211ENST00000474956 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
RNF220-211ENST00000474956 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
RNF220-211ENST00000474956 PPM1GO15355 546 aaPredicted RBP16.18■□□□□ 0.18
RNF220-211ENST00000474956 USP32Q8NFA0 1604 aa16.17■□□□□ 0.18
RNF220-211ENST00000474956 E9PSI1 815 aa16.17■□□□□ 0.18
RNF220-211ENST00000474956 AGLP35573 1532 aa16.17■□□□□ 0.18
RNF220-211ENST00000474956 PANK1Q8TE04 598 aa16.17■□□□□ 0.18
RNF220-211ENST00000474956 ARHGEF40Q8TER5 1519 aa16.16■□□□□ 0.18
RNF220-211ENST00000474956 SPATA31D1Q6ZQQ2 1576 aa16.16■□□□□ 0.18
RNF220-211ENST00000474956 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
RNF220-211ENST00000474956 NUTM2FA1L443 756 aa16.16■□□□□ 0.18
RNF220-211ENST00000474956 FRAT1Q92837 279 aaPredicted RBP16.16■□□□□ 0.18
RNF220-211ENST00000474956 NLRP1Q9C000 1473 aa16.15■□□□□ 0.18
RNF220-211ENST00000474956 ESF1Q9H501 851 aaKnown RBP16.15■□□□□ 0.18
RNF220-211ENST00000474956 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
RNF220-211ENST00000474956 SETD1AO15047 1707 aaKnown RBP16.14■□□□□ 0.17
RNF220-211ENST00000474956 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
RNF220-211ENST00000474956 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
RNF220-211ENST00000474956 REREQ9P2R6 1566 aa16.14■□□□□ 0.17
RNF220-211ENST00000474956 TERF2IPQ9NYB0 399 aa16.13■□□□□ 0.17
RNF220-211ENST00000474956 KDM2BQ8NHM5 1336 aa16.12■□□□□ 0.17
RNF220-211ENST00000474956 NEFMP07197 916 aa16.12■□□□□ 0.17
RNF220-211ENST00000474956 PUS7Q96PZ0 661 aaKnown RBP16.12■□□□□ 0.17
RNF220-211ENST00000474956 COG6Q9Y2V7 657 aa16.12■□□□□ 0.17
RNF220-211ENST00000474956 ATAD2Q6PL18 1390 aa16.12■□□□□ 0.17
RNF220-211ENST00000474956 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
RNF220-211ENST00000474956 RLBP1P12271 317 aa16.11■□□□□ 0.17
RNF220-211ENST00000474956 NME9Q86XW9 330 aa16.11■□□□□ 0.17
RNF220-211ENST00000474956 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms