RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 NHSL1Q5SYE7 1610 aa20.59■□□□□ 0.89
DNMT3A-211ENST00000474887 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
DNMT3A-211ENST00000474887 YTHDC2Q9H6S0 1430 aaKnown RBP20.58■□□□□ 0.88
DNMT3A-211ENST00000474887 ORAI2Q96SN7 254 aa20.57■□□□□ 0.88
DNMT3A-211ENST00000474887 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
DNMT3A-211ENST00000474887 CDC42BPGQ6DT37 1551 aa20.56■□□□□ 0.88
DNMT3A-211ENST00000474887 LAMC1P11047 1609 aa20.56■□□□□ 0.88
DNMT3A-211ENST00000474887 WAPLQ7Z5K2 1190 aa20.55■□□□□ 0.88
DNMT3A-211ENST00000474887 LRP6O75581 1613 aa20.55■□□□□ 0.88
DNMT3A-211ENST00000474887 PNPLA6Q8IY17 1366 aa20.55■□□□□ 0.88
DNMT3A-211ENST00000474887 NUTM2BA6NNL0 878 aaPredicted RBP20.54■□□□□ 0.88
DNMT3A-211ENST00000474887 NUTM2EB1AL46 878 aaPredicted RBP20.54■□□□□ 0.88
DNMT3A-211ENST00000474887 ESCO1Q5FWF5 840 aa20.54■□□□□ 0.88
DNMT3A-211ENST00000474887 CFAP70Q5T0N1 1121 aa20.54■□□□□ 0.88
DNMT3A-211ENST00000474887 NUTM2AQ8IVF1 878 aaPredicted RBP20.54■□□□□ 0.88
DNMT3A-211ENST00000474887 DDX17Q92841 729 aaKnown RBP20.52■□□□□ 0.88
DNMT3A-211ENST00000474887 KNDC1Q76NI1 1749 aa20.51■□□□□ 0.87
DNMT3A-211ENST00000474887 RXRBP28702 533 aa20.48■□□□□ 0.87
DNMT3A-211ENST00000474887 DCAF11Q8TEB1 546 aa20.48■□□□□ 0.87
DNMT3A-211ENST00000474887 FOXO3O43524 673 aa20.47■□□□□ 0.87
DNMT3A-211ENST00000474887 POGKQ9P215 609 aa20.47■□□□□ 0.87
DNMT3A-211ENST00000474887 AFF2P51816 1311 aa20.47■□□□□ 0.87
DNMT3A-211ENST00000474887 DLC1Q96QB1 1528 aa20.47■□□□□ 0.87
DNMT3A-211ENST00000474887 PLEKHH1Q9ULM0 1364 aa20.46■□□□□ 0.87
DNMT3A-211ENST00000474887 NGLY1Q96IV0 654 aa20.45■□□□□ 0.86
DNMT3A-211ENST00000474887 PRAM1Q96QH2 718 aa20.45■□□□□ 0.86
DNMT3A-211ENST00000474887 C8orf37Q96NL8 207 aa20.44■□□□□ 0.86
DNMT3A-211ENST00000474887 KDM2AQ9Y2K7 1162 aa20.44■□□□□ 0.86
DNMT3A-211ENST00000474887 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
DNMT3A-211ENST00000474887 PSME1Q06323 249 aa20.43■□□□□ 0.86
DNMT3A-211ENST00000474887 RBM6P78332 1123 aaKnown RBP20.41■□□□□ 0.86
DNMT3A-211ENST00000474887 FNBP4Q8N3X1 1017 aaPredicted RBP20.41■□□□□ 0.86
DNMT3A-211ENST00000474887 QTRT2Q9H974 415 aaKnown RBP20.41■□□□□ 0.86
DNMT3A-211ENST00000474887 PHF8Q9UPP1 1060 aa20.41■□□□□ 0.86
DNMT3A-211ENST00000474887 EIF3AQ14152 1382 aaKnown RBP20.41■□□□□ 0.86
DNMT3A-211ENST00000474887 PXDNQ92626 1479 aa20.41■□□□□ 0.86
DNMT3A-211ENST00000474887 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
DNMT3A-211ENST00000474887 ADAMTS2O95450 1211 aa20.4■□□□□ 0.86
DNMT3A-211ENST00000474887 ADGRB1O14514 1584 aa20.39■□□□□ 0.85
DNMT3A-211ENST00000474887 ANKARQ7Z5J8 1434 aa20.39■□□□□ 0.85
DNMT3A-211ENST00000474887 KRT28Q7Z3Y7 464 aa20.39■□□□□ 0.85
DNMT3A-211ENST00000474887 FMN2Q9NZ56 1722 aa20.39■□□□□ 0.85
DNMT3A-211ENST00000474887 COL22A1Q8NFW1 1626 aaPredicted RBP20.38■□□□□ 0.85
DNMT3A-211ENST00000474887 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
DNMT3A-211ENST00000474887 TRAK1Q9UPV9 953 aa20.38■□□□□ 0.85
DNMT3A-211ENST00000474887 KIF1AQ12756 1690 aa20.38■□□□□ 0.85
DNMT3A-211ENST00000474887 TRPC5Q9UL62 973 aaPredicted RBP20.37■□□□□ 0.85
DNMT3A-211ENST00000474887 USP21Q9UK80 565 aa20.36■□□□□ 0.85
DNMT3A-211ENST00000474887 SBNO1A3KN83 1393 aa20.35■□□□□ 0.85
DNMT3A-211ENST00000474887 SAFB2Q14151 953 aaKnown RBP eCLIP20.35■□□□□ 0.85
DNMT3A-211ENST00000474887 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
DNMT3A-211ENST00000474887 WASLO00401 505 aaPredicted RBP20.33■□□□□ 0.85
DNMT3A-211ENST00000474887 ADGRB2O60241 1585 aa20.33■□□□□ 0.84
DNMT3A-211ENST00000474887 ARHGEF10O15013 1369 aa20.32■□□□□ 0.84
DNMT3A-211ENST00000474887 MINK1Q8N4C8 1332 aaPredicted RBP20.29■□□□□ 0.84
DNMT3A-211ENST00000474887 UPF1Q92900 1129 aaKnown RBP eCLIP20.29■□□□□ 0.84
DNMT3A-211ENST00000474887 GPRASP1Q5JY77 1395 aa20.29■□□□□ 0.84
DNMT3A-211ENST00000474887 TNS3Q68CZ2 1445 aa20.28■□□□□ 0.84
DNMT3A-211ENST00000474887 HIRIP3Q9BW71 556 aaPredicted RBP20.27■□□□□ 0.84
DNMT3A-211ENST00000474887 ATRNO75882 1429 aa20.27■□□□□ 0.83
DNMT3A-211ENST00000474887 HAP1P54257 671 aaPredicted RBP20.26■□□□□ 0.83
DNMT3A-211ENST00000474887 PMFBP1Q8TBY8 1022 aa20.25■□□□□ 0.83
DNMT3A-211ENST00000474887 TULP4Q9NRJ4 1543 aa20.25■□□□□ 0.83
DNMT3A-211ENST00000474887 KIAA1210Q9ULL0 1709 aa20.24■□□□□ 0.83
DNMT3A-211ENST00000474887 BCL9LQ86UU0 1499 aa20.24■□□□□ 0.83
DNMT3A-211ENST00000474887 UNC5CLQ8IV45 518 aa20.24■□□□□ 0.83
DNMT3A-211ENST00000474887 NGDNQ8NEJ9 315 aaKnown RBP20.23■□□□□ 0.83
DNMT3A-211ENST00000474887 GJD4Q96KN9 370 aaPredicted RBP20.23■□□□□ 0.83
DNMT3A-211ENST00000474887 RGS12O14924 1447 aa20.22■□□□□ 0.83
DNMT3A-211ENST00000474887 LMOD2Q6P5Q4 547 aa20.22■□□□□ 0.83
DNMT3A-211ENST00000474887 NUDT16Q96DE0 195 aaKnown RBP20.22■□□□□ 0.83
DNMT3A-211ENST00000474887 PRR36Q9H6K5 1346 aa20.22■□□□□ 0.83
DNMT3A-211ENST00000474887 CCDC61Q9Y6R9 512 aa20.21■□□□□ 0.83
DNMT3A-211ENST00000474887 CDK19Q9BWU1 502 aa20.2■□□□□ 0.82
DNMT3A-211ENST00000474887 SLIT2O94813 1529 aa20.2■□□□□ 0.82
DNMT3A-211ENST00000474887 RGPD8O14715 1765 aaPredicted RBP20.2■□□□□ 0.82
DNMT3A-211ENST00000474887 ATAD2Q6PL18 1390 aa20.2■□□□□ 0.82
DNMT3A-211ENST00000474887 USP32Q8NFA0 1604 aa20.2■□□□□ 0.82
DNMT3A-211ENST00000474887 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
DNMT3A-211ENST00000474887 MARF1Q9Y4F3 1742 aaKnown RBP20.19■□□□□ 0.82
DNMT3A-211ENST00000474887 PLEKHG3A1L390 1219 aa20.18■□□□□ 0.82
DNMT3A-211ENST00000474887 NBPF1Q3BBV0 1214 aa20.18■□□□□ 0.82
DNMT3A-211ENST00000474887 CCDC125Q86Z20 511 aa20.18■□□□□ 0.82
DNMT3A-211ENST00000474887 VPS72Q15906 364 aa20.16■□□□□ 0.82
DNMT3A-211ENST00000474887 CABLES1Q8TDN4 633 aa20.16■□□□□ 0.82
DNMT3A-211ENST00000474887 CENPJQ9HC77 1338 aaPredicted RBP20.16■□□□□ 0.82
DNMT3A-211ENST00000474887 ARHGEF28Q8N1W1 1705 aaKnown RBP20.16■□□□□ 0.82
DNMT3A-211ENST00000474887 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.14■□□□□ 0.81
DNMT3A-211ENST00000474887 ATP7BP35670 1465 aa20.14■□□□□ 0.81
DNMT3A-211ENST00000474887 POLR3AO14802 1390 aaPredicted RBP20.13■□□□□ 0.81
DNMT3A-211ENST00000474887 FAM83GA6ND36 823 aa20.13■□□□□ 0.81
DNMT3A-211ENST00000474887 ONECUT3O60422 494 aaPredicted RBP20.13■□□□□ 0.81
DNMT3A-211ENST00000474887 PAK3O75914 559 aaPredicted RBP20.13■□□□□ 0.81
DNMT3A-211ENST00000474887 BRD4O60885 1362 aaPredicted RBP20.12■□□□□ 0.81
DNMT3A-211ENST00000474887 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
DNMT3A-211ENST00000474887 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
DNMT3A-211ENST00000474887 ITSN1Q15811 1721 aa20.1■□□□□ 0.81
DNMT3A-211ENST00000474887 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
DNMT3A-211ENST00000474887 RALGAPBQ86X10 1494 aa20.1■□□□□ 0.81
DNMT3A-211ENST00000474887 ACEP12821 1306 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms