RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 KANK1Q14678 1352 aa20.81■□□□□ 0.92
TPR-205ENST00000474852 CHD1O14646 1710 aa20.81■□□□□ 0.92
TPR-205ENST00000474852 MTHFSP49914 203 aa20.8■□□□□ 0.92
TPR-205ENST00000474852 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
TPR-205ENST00000474852 ZFYVE16Q7Z3T8 1539 aa20.78■□□□□ 0.92
TPR-205ENST00000474852 RWDD1Q9H446 243 aaPredicted RBP20.78■□□□□ 0.92
TPR-205ENST00000474852 MFAP1P55081 439 aaKnown RBP20.77■□□□□ 0.92
TPR-205ENST00000474852 TMEM132EQ6IEE7 984 aa20.77■□□□□ 0.92
TPR-205ENST00000474852 FTSJ3Q8IY81 847 aaKnown RBP20.77■□□□□ 0.92
TPR-205ENST00000474852 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
TPR-205ENST00000474852 MAP3K4Q9Y6R4 1608 aa20.76■□□□□ 0.91
TPR-205ENST00000474852 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
TPR-205ENST00000474852 TSR2Q969E8 191 aaKnown RBP20.76■□□□□ 0.91
TPR-205ENST00000474852 TET3O43151 1660 aa20.76■□□□□ 0.91
TPR-205ENST00000474852 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
TPR-205ENST00000474852 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.916e-7■■■■□ 25.7
TPR-205ENST00000474852 RRAGDQ9NQL2 400 aaPredicted RBP20.75■□□□□ 0.91
TPR-205ENST00000474852 SHPRHQ149N8 1683 aa20.75■□□□□ 0.91
TPR-205ENST00000474852 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
TPR-205ENST00000474852 ZCCHC11Q5TAX3 1644 aaKnown RBP20.74■□□□□ 0.91
TPR-205ENST00000474852 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
TPR-205ENST00000474852 KIAA1210Q9ULL0 1709 aa20.74■□□□□ 0.91
TPR-205ENST00000474852 WDR63Q8IWG1 891 aa20.74■□□□□ 0.91
TPR-205ENST00000474852 MVPQ14764 893 aaKnown RBP20.73■□□□□ 0.91
TPR-205ENST00000474852 L1TD1Q5T7N2 865 aaKnown RBP20.73■□□□□ 0.91
TPR-205ENST00000474852 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
TPR-205ENST00000474852 CFAP53Q96M91 514 aa20.72■□□□□ 0.91
TPR-205ENST00000474852 NOS1P29475 1434 aa20.72■□□□□ 0.91
TPR-205ENST00000474852 IQSEC2Q5JU85 1478 aa20.71■□□□□ 0.91
TPR-205ENST00000474852 RTEL1-TNFRSF6BF6WH68 1400 aa20.71■□□□□ 0.91
TPR-205ENST00000474852 DZIP1LQ8IYY4 767 aaKnown RBP20.71■□□□□ 0.91
TPR-205ENST00000474852 C22orf23Q9BZE7 217 aa20.71■□□□□ 0.91
TPR-205ENST00000474852 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
TPR-205ENST00000474852 ZKSCAN2Q63HK3 967 aa20.7■□□□□ 0.9
TPR-205ENST00000474852 DEPDC5O75140 1603 aa20.7■□□□□ 0.9
TPR-205ENST00000474852 NUTM2DQ5VT03 806 aaPredicted RBP20.7■□□□□ 0.9
TPR-205ENST00000474852 PANK2Q9BZ23 570 aa20.7■□□□□ 0.9
TPR-205ENST00000474852 SMC4Q9NTJ3 1288 aa20.7■□□□□ 0.9
TPR-205ENST00000474852 MYOM2P54296 1465 aa20.69■□□□□ 0.9
TPR-205ENST00000474852 XRCC6P12956 609 aaKnown RBP eCLIP20.69■□□□□ 0.9
TPR-205ENST00000474852 MCM4P33991 863 aa20.69■□□□□ 0.9
TPR-205ENST00000474852 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
TPR-205ENST00000474852 AAMPQ13685 434 aa20.68■□□□□ 0.9
TPR-205ENST00000474852 GOLGA6L3A6NEY3 463 aa20.68■□□□□ 0.9
TPR-205ENST00000474852 CFAP65Q6ZU64 1925 aaKnown RBP20.68■□□□□ 0.9
TPR-205ENST00000474852 ATP7AQ04656 1500 aa20.68■□□□□ 0.9
TPR-205ENST00000474852 SAFB2Q14151 953 aaKnown RBP eCLIP20.68■□□□□ 0.9
TPR-205ENST00000474852 KIF1BO60333 1816 aa20.67■□□□□ 0.9
TPR-205ENST00000474852 U2SURPO15042 1029 aaKnown RBP20.67■□□□□ 0.9
TPR-205ENST00000474852 EXOSC9Q06265 439 aaKnown RBP20.67■□□□□ 0.9
TPR-205ENST00000474852 MROH2AA6NES4 1674 aa20.67■□□□□ 0.9
TPR-205ENST00000474852 ZNF518AQ6AHZ1 1483 aa20.66■□□□□ 0.9
TPR-205ENST00000474852 TRIM27P14373 513 aa20.65■□□□□ 0.9
TPR-205ENST00000474852 SBNO2Q9Y2G9 1366 aa20.65■□□□□ 0.9
TPR-205ENST00000474852 CCDC27Q2M243 656 aa20.64■□□□□ 0.89
TPR-205ENST00000474852 SSH1Q8WYL5 1049 aa20.63■□□□□ 0.89
TPR-205ENST00000474852 TRAK2O60296 914 aa20.63■□□□□ 0.89
TPR-205ENST00000474852 FANCAO15360 1455 aa20.63■□□□□ 0.89
TPR-205ENST00000474852 VWDEQ8N2E2 1590 aa20.63■□□□□ 0.89
TPR-205ENST00000474852 CHMP5Q9NZZ3 219 aa20.63■□□□□ 0.89
TPR-205ENST00000474852 CABP2Q9NPB3 220 aa20.62■□□□□ 0.89
TPR-205ENST00000474852 ZMYM3Q14202 1370 aa20.6■□□□□ 0.89
TPR-205ENST00000474852 QRICH2Q9H0J4 1663 aa20.6■□□□□ 0.89
TPR-205ENST00000474852 HSCBQ8IWL3 235 aa20.6■□□□□ 0.89
TPR-205ENST00000474852 PKNOX2Q96KN3 472 aa20.6■□□□□ 0.89
TPR-205ENST00000474852 MYO3AQ8NEV4 1616 aa20.6■□□□□ 0.89
TPR-205ENST00000474852 NOB1Q9ULX3 412 aaKnown RBP20.6■□□□□ 0.89
TPR-205ENST00000474852 MROH1Q8NDA8 1641 aa20.6■□□□□ 0.89
TPR-205ENST00000474852 C14orf93Q9H972 538 aaKnown RBP20.59■□□□□ 0.89
TPR-205ENST00000474852 IFT172Q9UG01 1749 aa20.59■□□□□ 0.89
TPR-205ENST00000474852 GGT6Q6P531 493 aa20.59■□□□□ 0.89
TPR-205ENST00000474852 TMEM57Q8N5G2 664 aa20.59■□□□□ 0.89
TPR-205ENST00000474852 ADGRL1O94910 1474 aa20.58■□□□□ 0.89
TPR-205ENST00000474852 FSD2A1L4K1 749 aa20.58■□□□□ 0.89
TPR-205ENST00000474852 DDX19BQ9UMR2 479 aa20.58■□□□□ 0.89
TPR-205ENST00000474852 INO80Q9ULG1 1556 aaPredicted RBP20.58■□□□□ 0.89
TPR-205ENST00000474852 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.88
TPR-205ENST00000474852 LNPKQ9C0E8 428 aa20.58■□□□□ 0.88
TPR-205ENST00000474852 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.88
TPR-205ENST00000474852 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.88
TPR-205ENST00000474852 NRXN1Q9ULB1 1477 aa20.56■□□□□ 0.88
TPR-205ENST00000474852 PPRC1Q5VV67 1664 aaKnown RBP20.56■□□□□ 0.88
TPR-205ENST00000474852 TMPOP42166 694 aaKnown RBP20.56■□□□□ 0.88
TPR-205ENST00000474852 HDAC1Q13547 482 aaPredicted RBP20.56■□□□□ 0.88
TPR-205ENST00000474852 NAP1L5Q96NT1 182 aaPredicted RBP20.56■□□□□ 0.88
TPR-205ENST00000474852 TRIM35Q9UPQ4 493 aa20.55■□□□□ 0.88
TPR-205ENST00000474852 FOXD4L1Q9NU39 408 aa20.55■□□□□ 0.88
TPR-205ENST00000474852 NEURL4Q96JN8 1562 aa20.54■□□□□ 0.88
TPR-205ENST00000474852 EVC2Q86UK5 1308 aa20.54■□□□□ 0.88
TPR-205ENST00000474852 CD109Q6YHK3 1445 aa20.54■□□□□ 0.88
TPR-205ENST00000474852 STK26Q9P289 416 aa20.53■□□□□ 0.88
TPR-205ENST00000474852 SMC5Q8IY18 1101 aa20.52■□□□□ 0.88
TPR-205ENST00000474852 RIPK4P57078 832 aa20.52■□□□□ 0.88
TPR-205ENST00000474852 PNNQ9H307 717 aaKnown RBP20.52■□□□□ 0.88
TPR-205ENST00000474852 ANKRD36BQ8N2N9 1353 aa20.52■□□□□ 0.88
TPR-205ENST00000474852 UHRF1BP1LA0JNW5 1464 aa20.51■□□□□ 0.87
TPR-205ENST00000474852 ADGRB3O60242 1522 aa20.51■□□□□ 0.87
TPR-205ENST00000474852 ZC3H13Q5T200 1668 aaKnown RBP20.51■□□□□ 0.87
TPR-205ENST00000474852 SRPK2P78362 688 aaKnown RBP20.51■□□□□ 0.87
TPR-205ENST00000474852 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms