RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 ZNF579Q8NAF0 562 aaKnown RBP9.06□□□□□ -0.96
CPSF7-210ENST00000474684 NHSL1Q5SYE7 1610 aa9.05□□□□□ -0.96
CPSF7-210ENST00000474684 SHPRHQ149N8 1683 aa9.04□□□□□ -0.96
CPSF7-210ENST00000474684 PPP1R15AO75807 674 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-210ENST00000474684 AHDC1Q5TGY3 1603 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-210ENST00000474684 BCANQ96GW7 911 aa9.03□□□□□ -0.96
CPSF7-210ENST00000474684 FAM135BQ49AJ0 1406 aa9.03□□□□□ -0.96
CPSF7-210ENST00000474684 MSH6P52701 1360 aa9.02□□□□□ -0.97
CPSF7-210ENST00000474684 ASXL1Q8IXJ9 1541 aa9.02□□□□□ -0.97
CPSF7-210ENST00000474684 SOCS7O14512 581 aa9.02□□□□□ -0.97
CPSF7-210ENST00000474684 PROSER2Q86WR7 435 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-210ENST00000474684 KNDC1Q76NI1 1749 aa9.02□□□□□ -0.97
CPSF7-210ENST00000474684 LRP6O75581 1613 aa9.01□□□□□ -0.97
CPSF7-210ENST00000474684 METP08581 1390 aa9□□□□□ -0.97
CPSF7-210ENST00000474684 PCDH10Q9P2E7 1040 aa9□□□□□ -0.97
CPSF7-210ENST00000474684 PIK3R4Q99570 1358 aa8.99□□□□□ -0.97
CPSF7-210ENST00000474684 TBX22Q9Y458 520 aa8.99□□□□□ -0.97
CPSF7-210ENST00000474684 RGPD8O14715 1765 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-210ENST00000474684 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.98□□□□□ -0.97
CPSF7-210ENST00000474684 ZRANB1Q9UGI0 708 aa8.98□□□□□ -0.97
CPSF7-210ENST00000474684 LAMC1P11047 1609 aa8.98□□□□□ -0.97
CPSF7-210ENST00000474684 MST1RQ04912 1400 aa8.97□□□□□ -0.97
CPSF7-210ENST00000474684 ADGRL3Q9HAR2 1447 aa8.97□□□□□ -0.97
CPSF7-210ENST00000474684 OTUD5Q96G74 571 aa8.97□□□□□ -0.97
CPSF7-210ENST00000474684 RGS17Q9UGC6 210 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-210ENST00000474684 DCCP43146 1447 aa8.97□□□□□ -0.97
CPSF7-210ENST00000474684 NCOA3Q9Y6Q9 1424 aa8.97□□□□□ -0.97
CPSF7-210ENST00000474684 POTEMA6NI47 508 aa8.96□□□□□ -0.98
CPSF7-210ENST00000474684 ZNF326Q5BKZ1 582 aaKnown RBP8.96□□□□□ -0.98
CPSF7-210ENST00000474684 AMOTL2Q9Y2J4 779 aa8.96□□□□□ -0.98
CPSF7-210ENST00000474684 PTCH1Q13635 1447 aa8.96□□□□□ -0.98
CPSF7-210ENST00000474684 SPATA31E1Q6ZUB1 1445 aa8.96□□□□□ -0.98
CPSF7-210ENST00000474684 PRAG1Q86YV5 1406 aa8.96□□□□□ -0.98
CPSF7-210ENST00000474684 CDC42BPGQ6DT37 1551 aa8.95□□□□□ -0.98
CPSF7-210ENST00000474684 FMN2Q9NZ56 1722 aa8.95□□□□□ -0.98
CPSF7-210ENST00000474684 TRIM52Q96A61 297 aa8.95□□□□□ -0.98
CPSF7-210ENST00000474684 MARF1Q9Y4F3 1742 aaKnown RBP8.94□□□□□ -0.98
CPSF7-210ENST00000474684 HDGFP51858 240 aaKnown RBP8.94□□□□□ -0.98
CPSF7-210ENST00000474684 C14orf37Q86TY3 774 aa8.94□□□□□ -0.98
CPSF7-210ENST00000474684 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
CPSF7-210ENST00000474684 ROBO2Q9HCK4 1378 aa8.94□□□□□ -0.98
CPSF7-210ENST00000474684 JCADQ9P266 1359 aa8.93□□□□□ -0.98
CPSF7-210ENST00000474684 CCDC144AA2RUR9 1427 aa8.92□□□□□ -0.98
CPSF7-210ENST00000474684 ABCA3Q99758 1704 aa8.91□□□□□ -0.98
CPSF7-210ENST00000474684 PIK3C2GO75747 1445 aa8.91□□□□□ -0.98
CPSF7-210ENST00000474684 PAK3O75914 559 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-210ENST00000474684 POTEGQ6S5H5 508 aa8.91□□□□□ -0.98
CPSF7-210ENST00000474684 BRINP3Q76B58 766 aa8.91□□□□□ -0.98
CPSF7-210ENST00000474684 COL22A1Q8NFW1 1626 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-210ENST00000474684 C1orf167Q5SNV9 1468 aa8.9□□□□□ -0.98
CPSF7-210ENST00000474684 POTEAQ6S8J7 498 aa8.9□□□□□ -0.98
CPSF7-210ENST00000474684 CADPS2Q86UW7 1296 aa8.9□□□□□ -0.98
CPSF7-210ENST00000474684 C19orf44Q9H6X5 657 aa8.9□□□□□ -0.98
CPSF7-210ENST00000474684 MYOM2P54296 1465 aa8.89□□□□□ -0.99
CPSF7-210ENST00000474684 NRXN1Q9ULB1 1477 aa8.89□□□□□ -0.99
CPSF7-210ENST00000474684 TECPR2O15040 1411 aa8.89□□□□□ -0.99
CPSF7-210ENST00000474684 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
CPSF7-210ENST00000474684 RAB3GAP2Q9H2M9 1393 aa8.89□□□□□ -0.99
CPSF7-210ENST00000474684 ARHGEF28Q8N1W1 1705 aaKnown RBP8.89□□□□□ -0.99
CPSF7-210ENST00000474684 ADGRF5Q8IZF2 1346 aa8.89□□□□□ -0.99
CPSF7-210ENST00000474684 GALR2O43603 387 aaPredicted RBP8.89□□□□□ -0.99
CPSF7-210ENST00000474684 ATF3P18847 181 aa8.89□□□□□ -0.99
CPSF7-210ENST00000474684 DDX17Q92841 729 aaKnown RBP8.89□□□□□ -0.99
CPSF7-210ENST00000474684 USP32Q8NFA0 1604 aa8.89□□□□□ -0.99
CPSF7-210ENST00000474684 KIF1AQ12756 1690 aa8.88□□□□□ -0.99
CPSF7-210ENST00000474684 MPHOSPH9Q99550 1183 aa8.88□□□□□ -0.99
CPSF7-210ENST00000474684 PNPLA6Q8IY17 1366 aa8.87□□□□□ -0.99
CPSF7-210ENST00000474684 PLEKHH1Q9ULM0 1364 aa8.87□□□□□ -0.99
CPSF7-210ENST00000474684 ADGRB1O14514 1584 aa8.87□□□□□ -0.99
CPSF7-210ENST00000474684 RPGRIP1LQ68CZ1 1315 aa8.86□□□□□ -0.99
CPSF7-210ENST00000474684 PXDNQ92626 1479 aa8.86□□□□□ -0.99
CPSF7-210ENST00000474684 ADGRB2O60241 1585 aa8.86□□□□□ -0.99
CPSF7-210ENST00000474684 SPATA31A6Q5VVP1 1343 aa8.85□□□□□ -0.99
CPSF7-210ENST00000474684 POTEB2H3BUK9 544 aa8.85□□□□□ -0.99
CPSF7-210ENST00000474684 RGL3Q3MIN7 710 aa8.85□□□□□ -0.99
CPSF7-210ENST00000474684 CREBZFQ9NS37 354 aa8.85□□□□□ -0.99
CPSF7-210ENST00000474684 YTHDC2Q9H6S0 1430 aaKnown RBP8.85□□□□□ -0.99
CPSF7-210ENST00000474684 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.85□□□□□ -0.99
CPSF7-210ENST00000474684 TRPM3Q9HCF6 1732 aaPredicted RBP8.85□□□□□ -0.99
CPSF7-210ENST00000474684 CRYBG1Q9Y4K1 1723 aa8.85□□□□□ -0.99
CPSF7-210ENST00000474684 LRPPRCP42704 1394 aaKnown RBP8.85□□□□□ -0.99
CPSF7-210ENST00000474684 ANKRD30BQ9BXX2 1392 aa8.85□□□□□ -0.99
CPSF7-210ENST00000474684 PLCH1Q4KWH8 1693 aa8.85□□□□□ -0.99
CPSF7-210ENST00000474684 VGFO15240 615 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-210ENST00000474684 MAMSTRQ6ZN01 415 aa8.84□□□□□ -0.99
CPSF7-210ENST00000474684 ORAI2Q96SN7 254 aa8.84□□□□□ -0.99
CPSF7-210ENST00000474684 ITSN1Q15811 1721 aa8.83□□□□□ -1
CPSF7-210ENST00000474684 BRWD3Q6RI45 1802 aa8.83□□□□□ -1
CPSF7-210ENST00000474684 DLC1Q96QB1 1528 aa8.83□□□□□ -1
CPSF7-210ENST00000474684 TOPAZ1Q8N9V7 1692 aa8.82□□□□□ -1
CPSF7-210ENST00000474684 NUTM2BA6NNL0 878 aaPredicted RBP8.82□□□□□ -1
CPSF7-210ENST00000474684 NUTM2EB1AL46 878 aaPredicted RBP8.82□□□□□ -1
CPSF7-210ENST00000474684 TMEM132EQ6IEE7 984 aa8.82□□□□□ -1
CPSF7-210ENST00000474684 NUTM2AQ8IVF1 878 aaPredicted RBP8.82□□□□□ -1
CPSF7-210ENST00000474684 KIAA1210Q9ULL0 1709 aa8.82□□□□□ -1
CPSF7-210ENST00000474684 ALS2Q96Q42 1657 aa8.81□□□□□ -1
CPSF7-210ENST00000474684 SOS2Q07890 1332 aaPredicted RBP8.81□□□□□ -1
CPSF7-210ENST00000474684 RGS12O14924 1447 aa8.81□□□□□ -1
CPSF7-210ENST00000474684 MEX3CQ5U5Q3 659 aaKnown RBP8.81□□□□□ -1
CPSF7-210ENST00000474684 WAPLQ7Z5K2 1190 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms