RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 PLEKHH1Q9ULM0 1364 aa13.66□□□□□ -0.22
APTX-219ENST00000474658 CLSPNQ9HAW4 1339 aa13.65□□□□□ -0.22
APTX-219ENST00000474658 ADGRL3Q9HAR2 1447 aa13.65□□□□□ -0.22
APTX-219ENST00000474658 NALCNQ8IZF0 1738 aa13.65□□□□□ -0.22
APTX-219ENST00000474658 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.22
APTX-219ENST00000474658 SLAIN2Q9P270 581 aa13.65□□□□□ -0.22
APTX-219ENST00000474658 NBPF8Q3BBV2 869 aa13.64□□□□□ -0.23
APTX-219ENST00000474658 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
APTX-219ENST00000474658 PRAM1Q96QH2 718 aa13.63□□□□□ -0.23
APTX-219ENST00000474658 DLC1Q96QB1 1528 aa13.63□□□□□ -0.23
APTX-219ENST00000474658 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
APTX-219ENST00000474658 POGKQ9P215 609 aa13.62□□□□□ -0.23
APTX-219ENST00000474658 DCCP43146 1447 aa13.62□□□□□ -0.23
APTX-219ENST00000474658 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
APTX-219ENST00000474658 HSPA1LP34931 641 aa13.6□□□□□ -0.23
APTX-219ENST00000474658 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
APTX-219ENST00000474658 MST1RQ04912 1400 aa13.59□□□□□ -0.23
APTX-219ENST00000474658 ARHGEF28Q8N1W1 1705 aaKnown RBP13.58□□□□□ -0.24
APTX-219ENST00000474658 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.24
APTX-219ENST00000474658 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
APTX-219ENST00000474658 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
APTX-219ENST00000474658 CDC42BPGQ6DT37 1551 aa13.57□□□□□ -0.24
APTX-219ENST00000474658 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
APTX-219ENST00000474658 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
APTX-219ENST00000474658 HIRIP3Q9BW71 556 aaPredicted RBP13.56□□□□□ -0.24
APTX-219ENST00000474658 C1orf167Q5SNV9 1468 aa13.55□□□□□ -0.24
APTX-219ENST00000474658 RALGAPBQ86X10 1494 aa13.55□□□□□ -0.24
APTX-219ENST00000474658 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
APTX-219ENST00000474658 CARD11Q9BXL7 1154 aa13.54□□□□□ -0.24
APTX-219ENST00000474658 GPRASP1Q5JY77 1395 aa13.54□□□□□ -0.24
APTX-219ENST00000474658 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
APTX-219ENST00000474658 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
APTX-219ENST00000474658 CENPJQ9HC77 1338 aaPredicted RBP13.53□□□□□ -0.24
APTX-219ENST00000474658 ADGRB2O60241 1585 aa13.53□□□□□ -0.24
APTX-219ENST00000474658 ESCO1Q5FWF5 840 aa13.52□□□□□ -0.25
APTX-219ENST00000474658 PHLPP1O60346 1717 aa13.51□□□□□ -0.25
APTX-219ENST00000474658 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
APTX-219ENST00000474658 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
APTX-219ENST00000474658 RGPD8O14715 1765 aaPredicted RBP13.5□□□□□ -0.25
APTX-219ENST00000474658 AHDC1Q5TGY3 1603 aaPredicted RBP13.5□□□□□ -0.25
APTX-219ENST00000474658 QRICH2Q9H0J4 1663 aa13.49□□□□□ -0.25
APTX-219ENST00000474658 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
APTX-219ENST00000474658 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
APTX-219ENST00000474658 NHSL1Q5SYE7 1610 aa13.48□□□□□ -0.25
APTX-219ENST00000474658 USP32Q8NFA0 1604 aa13.48□□□□□ -0.25
APTX-219ENST00000474658 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
APTX-219ENST00000474658 COL16A1Q07092 1604 aaPredicted RBP13.47□□□□□ -0.25
APTX-219ENST00000474658 PRR36Q9H6K5 1346 aa13.47□□□□□ -0.25
APTX-219ENST00000474658 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
APTX-219ENST00000474658 TULP4Q9NRJ4 1543 aa13.47□□□□□ -0.25
APTX-219ENST00000474658 FOXO3O43524 673 aa13.46□□□□□ -0.25
APTX-219ENST00000474658 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
APTX-219ENST00000474658 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
APTX-219ENST00000474658 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
APTX-219ENST00000474658 NUDT16Q96DE0 195 aaKnown RBP13.45□□□□□ -0.26
APTX-219ENST00000474658 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
APTX-219ENST00000474658 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
APTX-219ENST00000474658 SRPK2P78362 688 aaKnown RBP13.44□□□□□ -0.26
APTX-219ENST00000474658 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
APTX-219ENST00000474658 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
APTX-219ENST00000474658 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
APTX-219ENST00000474658 EVC2Q86UK5 1308 aa13.43□□□□□ -0.26
APTX-219ENST00000474658 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
APTX-219ENST00000474658 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
APTX-219ENST00000474658 LRRC59Q96AG4 307 aaKnown RBP13.43□□□□□ -0.26
APTX-219ENST00000474658 JCADQ9P266 1359 aa13.43□□□□□ -0.26
APTX-219ENST00000474658 ATP7BP35670 1465 aa13.42□□□□□ -0.26
APTX-219ENST00000474658 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
APTX-219ENST00000474658 PXDNQ92626 1479 aa13.42□□□□□ -0.26
APTX-219ENST00000474658 KRT28Q7Z3Y7 464 aa13.41□□□□□ -0.26
APTX-219ENST00000474658 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
APTX-219ENST00000474658 USP47Q96K76 1375 aa13.41□□□□□ -0.26
APTX-219ENST00000474658 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
APTX-219ENST00000474658 PSME1Q06323 249 aa13.4□□□□□ -0.26
APTX-219ENST00000474658 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
APTX-219ENST00000474658 SBNO2Q9Y2G9 1366 aa13.4□□□□□ -0.26
APTX-219ENST00000474658 TESK2Q96S53 571 aa13.39□□□□□ -0.27
APTX-219ENST00000474658 SHPRHQ149N8 1683 aa13.39□□□□□ -0.27
APTX-219ENST00000474658 TOPAZ1Q8N9V7 1692 aa13.39□□□□□ -0.27
APTX-219ENST00000474658 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
APTX-219ENST00000474658 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
APTX-219ENST00000474658 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
APTX-219ENST00000474658 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
APTX-219ENST00000474658 CABP1Q9NZU7 370 aa13.37□□□□□ -0.27
APTX-219ENST00000474658 ACEP12821 1306 aa13.37□□□□□ -0.27
APTX-219ENST00000474658 SPATA31A6Q5VVP1 1343 aa13.37□□□□□ -0.27
APTX-219ENST00000474658 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
APTX-219ENST00000474658 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
APTX-219ENST00000474658 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
APTX-219ENST00000474658 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
APTX-219ENST00000474658 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
APTX-219ENST00000474658 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
APTX-219ENST00000474658 ATAD2Q6PL18 1390 aa13.34□□□□□ -0.27
APTX-219ENST00000474658 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
APTX-219ENST00000474658 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
APTX-219ENST00000474658 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
APTX-219ENST00000474658 LRP6O75581 1613 aa13.34□□□□□ -0.27
APTX-219ENST00000474658 TRPM3Q9HCF6 1732 aaPredicted RBP13.33□□□□□ -0.27
APTX-219ENST00000474658 TNS3Q68CZ2 1445 aa13.33□□□□□ -0.28
APTX-219ENST00000474658 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms