RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
SSB-210ENST00000474273 Q3C1V9 767 aa11.51□□□□□ -0.57
SSB-210ENST00000474273 GMPR2Q9P2T1 348 aaKnown RBP11.51□□□□□ -0.57
SSB-210ENST00000474273 TTC24A2A3L6 582 aaPredicted RBP11.5□□□□□ -0.57
SSB-210ENST00000474273 WNT7AO00755 349 aa11.5□□□□□ -0.57
SSB-210ENST00000474273 MMP16P51512 607 aa11.49□□□□□ -0.57
SSB-210ENST00000474273 CD46P15529 392 aa11.48□□□□□ -0.57
SSB-210ENST00000474273 C11orf95C9JLR9 678 aaPredicted RBP11.47□□□□□ -0.57
SSB-210ENST00000474273 TRIM32Q13049 653 aa11.47□□□□□ -0.57
SSB-210ENST00000474273 SNIP1Q8TAD8 396 aaKnown RBP11.46□□□□□ -0.57
SSB-210ENST00000474273 SMPD1P17405 629 aa11.45□□□□□ -0.58
SSB-210ENST00000474273 USB1Q9BQ65 265 aaKnown RBP11.44□□□□□ -0.58
SSB-210ENST00000474273 KDM4AO75164 1064 aa11.43□□□□□ -0.58
SSB-210ENST00000474273 WFS1O76024 890 aa11.43□□□□□ -0.58
SSB-210ENST00000474273 DXOO77932 396 aaKnown RBP11.43□□□□□ -0.58
SSB-210ENST00000474273 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
SSB-210ENST00000474273 MRGPRX2Q96LB1 330 aa11.43□□□□□ -0.58
SSB-210ENST00000474273 USP46P62068 366 aa11.4□□□□□ -0.58
SSB-210ENST00000474273 REPIN1Q9BWE0 567 aaKnown RBP11.4□□□□□ -0.58
SSB-210ENST00000474273 J3QL48 77 aa11.39□□□□□ -0.59
SSB-210ENST00000474273 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
SSB-210ENST00000474273 ATP13A2Q9NQ11 1180 aa11.39□□□□□ -0.59
SSB-210ENST00000474273 IRF6O14896 467 aa11.37□□□□□ -0.59
SSB-210ENST00000474273 HLA-CQ95604 372 aa11.37□□□□□ -0.59
SSB-210ENST00000474273 HOXA2O43364 376 aa11.36□□□□□ -0.59
SSB-210ENST00000474273 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
SSB-210ENST00000474273 WNT7BP56706 349 aa11.35□□□□□ -0.59
SSB-210ENST00000474273 CCDC24Q8N4L8 307 aa11.35□□□□□ -0.59
SSB-210ENST00000474273 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
SSB-210ENST00000474273 WIPF1O43516 503 aa11.34□□□□□ -0.59
SSB-210ENST00000474273 SKOR1P84550 965 aa11.34□□□□□ -0.59
SSB-210ENST00000474273 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
SSB-210ENST00000474273 HPS1Q92902 700 aa11.34□□□□□ -0.59
SSB-210ENST00000474273 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
SSB-210ENST00000474273 MINK1Q8N4C8 1332 aaPredicted RBP11.34□□□□□ -0.59
SSB-210ENST00000474273 SNRPBP14678 240 aaKnown RBP11.33□□□□□ -0.6
SSB-210ENST00000474273 JUNDP17535 347 aa11.31□□□□□ -0.6
SSB-210ENST00000474273 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
SSB-210ENST00000474273 TERTO14746 1132 aaKnown RBP11.29□□□□□ -0.6
SSB-210ENST00000474273 HAP1P54257 671 aaPredicted RBP11.29□□□□□ -0.6
SSB-210ENST00000474273 GUCA2AQ02747 115 aa11.29□□□□□ -0.6
SSB-210ENST00000474273 CCDC102AQ96A19 550 aa11.29□□□□□ -0.6
SSB-210ENST00000474273 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
SSB-210ENST00000474273 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
SSB-210ENST00000474273 STK17AQ9UEE5 414 aa11.29□□□□□ -0.6
SSB-210ENST00000474273 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
SSB-210ENST00000474273 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
SSB-210ENST00000474273 CLCN1P35523 988 aa11.27□□□□□ -0.61
SSB-210ENST00000474273 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.61
SSB-210ENST00000474273 LCE2CQ5TA81 110 aa11.26□□□□□ -0.61
SSB-210ENST00000474273 RETREG3Q86VR2 466 aa11.26□□□□□ -0.61
SSB-210ENST00000474273 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
SSB-210ENST00000474273 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
SSB-210ENST00000474273 NUDT12Q9BQG2 462 aa11.25□□□□□ -0.61
SSB-210ENST00000474273 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
SSB-210ENST00000474273 SIAH2O43255 324 aa11.23□□□□□ -0.61
SSB-210ENST00000474273 PTCRAQ6ISU1 281 aaPredicted RBP11.22□□□□□ -0.61
SSB-210ENST00000474273 EHBP1Q8NDI1 1231 aa11.21□□□□□ -0.61
SSB-210ENST00000474273 FDX1P10109 184 aa11.2□□□□□ -0.62
SSB-210ENST00000474273 PCDHGC3Q9UN70 934 aa11.19□□□□□ -0.62
SSB-210ENST00000474273 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
SSB-210ENST00000474273 CCNYL3P0C7X3 344 aa11.17□□□□□ -0.62
SSB-210ENST00000474273 MS4A1P11836 297 aa11.17□□□□□ -0.62
SSB-210ENST00000474273 WASF2Q9Y6W5 498 aa11.17□□□□□ -0.62
SSB-210ENST00000474273 C6orf229H3BNL8 230 aa11.16□□□□□ -0.62
SSB-210ENST00000474273 CAPN5O15484 640 aaPredicted RBP11.16□□□□□ -0.62
SSB-210ENST00000474273 SH3BP2P78314 561 aa11.16□□□□□ -0.62
SSB-210ENST00000474273 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.62
SSB-210ENST00000474273 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
SSB-210ENST00000474273 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
SSB-210ENST00000474273 BMP1P13497 986 aa11.14□□□□□ -0.63
SSB-210ENST00000474273 PTPRNQ16849 979 aa11.14□□□□□ -0.63
SSB-210ENST00000474273 SSTR3P32745 418 aaPredicted RBP11.12□□□□□ -0.63
SSB-210ENST00000474273 SPIRE2Q8WWL2 714 aa11.12□□□□□ -0.63
SSB-210ENST00000474273 UNC93B1Q9H1C4 597 aa11.12□□□□□ -0.63
SSB-210ENST00000474273 EVA1BQ9NVM1 165 aa11.12□□□□□ -0.63
SSB-210ENST00000474273 NPAS3Q8IXF0 933 aa11.11□□□□□ -0.63
SSB-210ENST00000474273 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
SSB-210ENST00000474273 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
SSB-210ENST00000474273 MOXD2PA6NHM9 499 aa11.08□□□□□ -0.64
SSB-210ENST00000474273 NDUFV2P19404 249 aa11.08□□□□□ -0.64
SSB-210ENST00000474273 LINC01559Q495D7 138 aa11.08□□□□□ -0.64
SSB-210ENST00000474273 BAP1Q92560 729 aa11.08□□□□□ -0.64
SSB-210ENST00000474273 TLL2Q9Y6L7 1015 aa11.08□□□□□ -0.64
SSB-210ENST00000474273 DESI1Q6ICB0 168 aa11.07□□□□□ -0.64
SSB-210ENST00000474273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
SSB-210ENST00000474273 MPNDQ8N594 471 aa11.07□□□□□ -0.64
SSB-210ENST00000474273 PRR7Q8TB68 274 aa11.07□□□□□ -0.64
SSB-210ENST00000474273 IRF7Q92985 503 aa11.07□□□□□ -0.64
SSB-210ENST00000474273 PLEKHG3A1L390 1219 aa11.06□□□□□ -0.64
SSB-210ENST00000474273 SPDYE5A6NIY4 337 aa11.06□□□□□ -0.64
SSB-210ENST00000474273 VARSP26640 1264 aaKnown RBP11.06□□□□□ -0.64
SSB-210ENST00000474273 GMPRP36959 345 aa11.06□□□□□ -0.64
SSB-210ENST00000474273 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
SSB-210ENST00000474273 FAM181BA6NEQ2 426 aa11.05□□□□□ -0.64
SSB-210ENST00000474273 H3BM21 787 aa11.05□□□□□ -0.64
SSB-210ENST00000474273 MTMR2Q13614 643 aa11.05□□□□□ -0.64
SSB-210ENST00000474273 ZFP42Q96MM3 310 aa11.05□□□□□ -0.64
SSB-210ENST00000474273 NNTQ13423 1086 aa11.03□□□□□ -0.64
SSB-210ENST00000474273 TTLL12Q14166 644 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms