RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SIRT1Q96EB6 747 aa14.15□□□□□ -0.14
PRPF38A-202ENST00000474048 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
PRPF38A-202ENST00000474048 C14orf37Q86TY3 774 aa14.13□□□□□ -0.15
PRPF38A-202ENST00000474048 C11orf95C9JLR9 678 aaPredicted RBP14.12□□□□□ -0.15
PRPF38A-202ENST00000474048 ANP32CO43423 234 aa14.12□□□□□ -0.15
PRPF38A-202ENST00000474048 WAPLQ7Z5K2 1190 aa14.12□□□□□ -0.15
PRPF38A-202ENST00000474048 ATAD2Q6PL18 1390 aa14.11□□□□□ -0.15
PRPF38A-202ENST00000474048 ROBO2Q9HCK4 1378 aa14.11□□□□□ -0.15
PRPF38A-202ENST00000474048 TMC1Q8TDI8 760 aa14.11□□□□□ -0.15
PRPF38A-202ENST00000474048 PTPRUQ92729 1446 aa14.11□□□□□ -0.15
PRPF38A-202ENST00000474048 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
PRPF38A-202ENST00000474048 NWD1Q149M9 1564 aa14.1□□□□□ -0.15
PRPF38A-202ENST00000474048 KCNA6P17658 529 aa14.1□□□□□ -0.15
PRPF38A-202ENST00000474048 NKTRP30414 1462 aaKnown RBP14.1□□□□□ -0.15
PRPF38A-202ENST00000474048 PLEKHH1Q9ULM0 1364 aa14.09□□□□□ -0.15
PRPF38A-202ENST00000474048 NINLQ9Y2I6 1382 aa14.09□□□□□ -0.15
PRPF38A-202ENST00000474048 ADGRB2O60241 1585 aa14.09□□□□□ -0.15
PRPF38A-202ENST00000474048 STRCQ7RTU9 1775 aa14.09□□□□□ -0.15
PRPF38A-202ENST00000474048 PUS7Q96PZ0 661 aaKnown RBP14.09□□□□□ -0.15
PRPF38A-202ENST00000474048 PROSER2Q86WR7 435 aaPredicted RBP14.07□□□□□ -0.16
PRPF38A-202ENST00000474048 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
PRPF38A-202ENST00000474048 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
PRPF38A-202ENST00000474048 MYOM1P52179 1685 aa14.07□□□□□ -0.16
PRPF38A-202ENST00000474048 WASLO00401 505 aaPredicted RBP14.06□□□□□ -0.16
PRPF38A-202ENST00000474048 ITSN1Q15811 1721 aa14.06□□□□□ -0.16
PRPF38A-202ENST00000474048 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.05□□□□□ -0.16
PRPF38A-202ENST00000474048 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
PRPF38A-202ENST00000474048 TERF2IPQ9NYB0 399 aa14.05□□□□□ -0.16
PRPF38A-202ENST00000474048 KNSTRNQ9Y448 316 aa14.05□□□□□ -0.16
PRPF38A-202ENST00000474048 NALCNQ8IZF0 1738 aa14.04□□□□□ -0.16
PRPF38A-202ENST00000474048 PANK3Q9H999 370 aa14.03□□□□□ -0.16
PRPF38A-202ENST00000474048 CDC42BPGQ6DT37 1551 aa14.03□□□□□ -0.16
PRPF38A-202ENST00000474048 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.16
PRPF38A-202ENST00000474048 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
PRPF38A-202ENST00000474048 KTN1Q86UP2 1357 aaKnown RBP14.01□□□□□ -0.17
PRPF38A-202ENST00000474048 PPIP5K1Q6PFW1 1433 aa14□□□□□ -0.17
PRPF38A-202ENST00000474048 ANKRD36BQ8N2N9 1353 aa14□□□□□ -0.17
PRPF38A-202ENST00000474048 NUDT16Q96DE0 195 aaKnown RBP14□□□□□ -0.17
PRPF38A-202ENST00000474048 FMN2Q9NZ56 1722 aa14□□□□□ -0.17
PRPF38A-202ENST00000474048 ATP7BP35670 1465 aa13.99□□□□□ -0.17
PRPF38A-202ENST00000474048 ANKARQ7Z5J8 1434 aa13.99□□□□□ -0.17
PRPF38A-202ENST00000474048 NCOA3Q9Y6Q9 1424 aa13.99□□□□□ -0.17
PRPF38A-202ENST00000474048 MSH6P52701 1360 aa13.99□□□□□ -0.17
PRPF38A-202ENST00000474048 ATF3P18847 181 aa13.99□□□□□ -0.17
PRPF38A-202ENST00000474048 CCDC61Q9Y6R9 512 aa13.99□□□□□ -0.17
PRPF38A-202ENST00000474048 NUTM2FA1L443 756 aa13.98□□□□□ -0.17
PRPF38A-202ENST00000474048 SLC12A5Q9H2X9 1139 aa13.98□□□□□ -0.17
PRPF38A-202ENST00000474048 TOPAZ1Q8N9V7 1692 aa13.98□□□□□ -0.17
PRPF38A-202ENST00000474048 TMEM94Q12767 1356 aa13.97□□□□□ -0.17
PRPF38A-202ENST00000474048 STRCP1A6NGW2 1772 aa13.97□□□□□ -0.17
PRPF38A-202ENST00000474048 MIER1Q8N108 512 aa13.97□□□□□ -0.17
PRPF38A-202ENST00000474048 CABP1Q9NZU7 370 aa13.97□□□□□ -0.17
PRPF38A-202ENST00000474048 NSD3Q9BZ95 1437 aa13.97□□□□□ -0.17
PRPF38A-202ENST00000474048 CGNL1Q0VF96 1302 aa13.96□□□□□ -0.17
PRPF38A-202ENST00000474048 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
PRPF38A-202ENST00000474048 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.17
PRPF38A-202ENST00000474048 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.17
PRPF38A-202ENST00000474048 RALBP1Q15311 655 aa13.95□□□□□ -0.18
PRPF38A-202ENST00000474048 NGDNQ8NEJ9 315 aaKnown RBP13.95□□□□□ -0.18
PRPF38A-202ENST00000474048 DCCP43146 1447 aa13.95□□□□□ -0.18
PRPF38A-202ENST00000474048 A0A1W2PP64 1363 aa13.95□□□□□ -0.18
PRPF38A-202ENST00000474048 USP32Q8NFA0 1604 aa13.94□□□□□ -0.18
PRPF38A-202ENST00000474048 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
PRPF38A-202ENST00000474048 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
PRPF38A-202ENST00000474048 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
PRPF38A-202ENST00000474048 KIF20BQ96Q89 1820 aa13.93□□□□□ -0.18
PRPF38A-202ENST00000474048 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
PRPF38A-202ENST00000474048 RGPD8O14715 1765 aaPredicted RBP13.93□□□□□ -0.18
PRPF38A-202ENST00000474048 AKAP12Q02952 1782 aa13.93□□□□□ -0.18
PRPF38A-202ENST00000474048 NSD2O96028 1365 aa13.93□□□□□ -0.18
PRPF38A-202ENST00000474048 MON2Q7Z3U7 1717 aa13.92□□□□□ -0.18
PRPF38A-202ENST00000474048 KIF1AQ12756 1690 aa13.91□□□□□ -0.18
PRPF38A-202ENST00000474048 EDC4Q6P2E9 1401 aaKnown RBP13.91□□□□□ -0.18
PRPF38A-202ENST00000474048 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
PRPF38A-202ENST00000474048 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
PRPF38A-202ENST00000474048 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.18
PRPF38A-202ENST00000474048 CCER2I3L3R5 266 aa13.9□□□□□ -0.18
PRPF38A-202ENST00000474048 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
PRPF38A-202ENST00000474048 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
PRPF38A-202ENST00000474048 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
PRPF38A-202ENST00000474048 NPC1L1Q9UHC9 1359 aa13.9□□□□□ -0.18
PRPF38A-202ENST00000474048 ACEP12821 1306 aa13.9□□□□□ -0.19
PRPF38A-202ENST00000474048 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.19
PRPF38A-202ENST00000474048 PLEKHG3A1L390 1219 aa13.89□□□□□ -0.19
PRPF38A-202ENST00000474048 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
PRPF38A-202ENST00000474048 ANKRD26Q9UPS8 1709 aa13.89□□□□□ -0.19
PRPF38A-202ENST00000474048 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
PRPF38A-202ENST00000474048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRPF38A-202ENST00000474048 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
PRPF38A-202ENST00000474048 CPSF1Q10570 1443 aaKnown RBP13.87□□□□□ -0.19
PRPF38A-202ENST00000474048 CD163L1Q9NR16 1453 aa13.87□□□□□ -0.19
PRPF38A-202ENST00000474048 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
PRPF38A-202ENST00000474048 PSME1Q06323 249 aa13.86□□□□□ -0.19
PRPF38A-202ENST00000474048 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
PRPF38A-202ENST00000474048 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
PRPF38A-202ENST00000474048 USP6P35125 1406 aa13.86□□□□□ -0.19
PRPF38A-202ENST00000474048 TTC21AQ8NDW8 1320 aa13.86□□□□□ -0.19
PRPF38A-202ENST00000474048 C1orf167Q5SNV9 1468 aa13.86□□□□□ -0.19
PRPF38A-202ENST00000474048 POLR3AO14802 1390 aaPredicted RBP13.85□□□□□ -0.19
PRPF38A-202ENST00000474048 BRD4O60885 1362 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms