RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 POLR3AO14802 1390 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-214ENST00000473778 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
C9orf3-214ENST00000473778 WWC1Q8IX03 1113 aa14.26□□□□□ -0.13
C9orf3-214ENST00000473778 E9PSI1 815 aa14.26□□□□□ -0.13
C9orf3-214ENST00000473778 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-214ENST00000473778 IGHDP01880 384 aa14.25□□□□□ -0.13
C9orf3-214ENST00000473778 RGS3P49796 1198 aa14.25□□□□□ -0.13
C9orf3-214ENST00000473778 SIGLEC1Q9BZZ2 1709 aa14.25□□□□□ -0.13
C9orf3-214ENST00000473778 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.25□□□□□ -0.13
C9orf3-214ENST00000473778 UBE2Q2Q8WVN8 375 aa14.25□□□□□ -0.13
C9orf3-214ENST00000473778 NEFMP07197 916 aa14.24□□□□□ -0.13
C9orf3-214ENST00000473778 C14orf93Q9H972 538 aaKnown RBP14.24□□□□□ -0.13
C9orf3-214ENST00000473778 RRP7AQ9Y3A4 280 aaKnown RBP14.24□□□□□ -0.13
C9orf3-214ENST00000473778 GGT6Q6P531 493 aa14.24□□□□□ -0.13
C9orf3-214ENST00000473778 NEUROD2Q15784 382 aa14.23□□□□□ -0.13
C9orf3-214ENST00000473778 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-214ENST00000473778 IQSEC2Q5JU85 1478 aa14.23□□□□□ -0.13
C9orf3-214ENST00000473778 FAM161AQ3B820 660 aa14.23□□□□□ -0.13
C9orf3-214ENST00000473778 POGZQ7Z3K3 1410 aa14.22□□□□□ -0.13
C9orf3-214ENST00000473778 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
C9orf3-214ENST00000473778 PANK1Q8TE04 598 aa14.22□□□□□ -0.13
C9orf3-214ENST00000473778 HECW2Q9P2P5 1572 aa14.22□□□□□ -0.13
C9orf3-214ENST00000473778 SLC24A1O60721 1099 aa14.21□□□□□ -0.13
C9orf3-214ENST00000473778 MORC1Q86VD1 984 aa14.21□□□□□ -0.13
C9orf3-214ENST00000473778 TNNQ9UQP3 1299 aa14.21□□□□□ -0.13
C9orf3-214ENST00000473778 ABCC3O15438 1527 aa14.2□□□□□ -0.14
C9orf3-214ENST00000473778 COG6Q9Y2V7 657 aa14.2□□□□□ -0.14
C9orf3-214ENST00000473778 GLI2P10070 1586 aa14.2□□□□□ -0.14
C9orf3-214ENST00000473778 TULP4Q9NRJ4 1543 aa14.2□□□□□ -0.14
C9orf3-214ENST00000473778 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
C9orf3-214ENST00000473778 ARHGEF28Q8N1W1 1705 aaKnown RBP14.19□□□□□ -0.14
C9orf3-214ENST00000473778 MTHFSP49914 203 aa14.19□□□□□ -0.14
C9orf3-214ENST00000473778 VIRMAQ69YN4 1812 aaKnown RBP14.19□□□□□ -0.14
C9orf3-214ENST00000473778 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
C9orf3-214ENST00000473778 MLH3Q9UHC1 1453 aa14.19□□□□□ -0.14
C9orf3-214ENST00000473778 CD109Q6YHK3 1445 aa14.18□□□□□ -0.14
C9orf3-214ENST00000473778 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
C9orf3-214ENST00000473778 RLBP1P12271 317 aa14.18□□□□□ -0.14
C9orf3-214ENST00000473778 DDRGK1Q96HY6 314 aa14.18□□□□□ -0.14
C9orf3-214ENST00000473778 PDE3AQ14432 1141 aa14.17□□□□□ -0.14
C9orf3-214ENST00000473778 RUNDC1Q96C34 613 aa14.17□□□□□ -0.14
C9orf3-214ENST00000473778 PIK3C2BO00750 1634 aa14.17□□□□□ -0.14
C9orf3-214ENST00000473778 NEXMIFQ5QGS0 1516 aa14.17□□□□□ -0.14
C9orf3-214ENST00000473778 RARSP54136 660 aaKnown RBP14.16□□□□□ -0.14
C9orf3-214ENST00000473778 NGEFQ8N5V2 710 aa14.16□□□□□ -0.14
C9orf3-214ENST00000473778 FRAT1Q92837 279 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-214ENST00000473778 CLUAP1Q96AJ1 413 aa14.16□□□□□ -0.14
C9orf3-214ENST00000473778 BCL2L13Q9BXK5 485 aa14.16□□□□□ -0.14
C9orf3-214ENST00000473778 USP19O94966 1318 aa14.16□□□□□ -0.14
C9orf3-214ENST00000473778 RAPGEF3O95398 923 aa14.16□□□□□ -0.14
C9orf3-214ENST00000473778 USP35Q9P2H5 1018 aa14.16□□□□□ -0.14
C9orf3-214ENST00000473778 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
C9orf3-214ENST00000473778 SEC24BO95487 1268 aa14.15□□□□□ -0.14
C9orf3-214ENST00000473778 CGNL1Q0VF96 1302 aa14.15□□□□□ -0.14
C9orf3-214ENST00000473778 PPM1GO15355 546 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-214ENST00000473778 SAFB2Q14151 953 aaKnown RBP eCLIP14.14□□□□□ -0.15
C9orf3-214ENST00000473778 CABP2Q9NPB3 220 aa14.14□□□□□ -0.15
C9orf3-214ENST00000473778 NFKBIBQ15653 356 aa14.14□□□□□ -0.15
C9orf3-214ENST00000473778 PCDHB15Q9Y5E8 787 aa14.14□□□□□ -0.15
C9orf3-214ENST00000473778 MYO5BQ9ULV0 1848 aa14.13□□□□□ -0.15
C9orf3-214ENST00000473778 CANXP27824 592 aaKnown RBP14.12□□□□□ -0.15
C9orf3-214ENST00000473778 CFAP74Q9C0B2 1584 aa14.12□□□□□ -0.15
C9orf3-214ENST00000473778 ANKRD36BQ8N2N9 1353 aa14.12□□□□□ -0.15
C9orf3-214ENST00000473778 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-214ENST00000473778 RPGRIP1LQ68CZ1 1315 aa14.12□□□□□ -0.15
C9orf3-214ENST00000473778 IL27Q8NEV9 243 aa14.11□□□□□ -0.15
C9orf3-214ENST00000473778 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-214ENST00000473778 NINLQ9Y2I6 1382 aa14.11□□□□□ -0.15
C9orf3-214ENST00000473778 NLRP1Q9C000 1473 aa14.11□□□□□ -0.15
C9orf3-214ENST00000473778 ADGRB2O60241 1585 aa14.11□□□□□ -0.15
C9orf3-214ENST00000473778 DIP2CQ9Y2E4 1556 aa14.11□□□□□ -0.15
C9orf3-214ENST00000473778 IDI1Q13907 227 aa14.1□□□□□ -0.15
C9orf3-214ENST00000473778 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-214ENST00000473778 A0A1W2PP64 1363 aa14.1□□□□□ -0.15
C9orf3-214ENST00000473778 EVC2Q86UK5 1308 aa14.1□□□□□ -0.15
C9orf3-214ENST00000473778 WDR63Q8IWG1 891 aa14.1□□□□□ -0.15
C9orf3-214ENST00000473778 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
C9orf3-214ENST00000473778 U2AF1L5P0DN76 240 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-214ENST00000473778 U2AF1Q01081 240 aaKnown RBP eCLIP14.09□□□□□ -0.15
C9orf3-214ENST00000473778 CCDC27Q2M243 656 aa14.09□□□□□ -0.15
C9orf3-214ENST00000473778 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
C9orf3-214ENST00000473778 TSR2Q969E8 191 aaKnown RBP14.08□□□□□ -0.16
C9orf3-214ENST00000473778 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
C9orf3-214ENST00000473778 STK26Q9P289 416 aa14.08□□□□□ -0.16
C9orf3-214ENST00000473778 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-214ENST00000473778 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
C9orf3-214ENST00000473778 GGNBP2Q9H3C7 697 aa14.07□□□□□ -0.16
C9orf3-214ENST00000473778 ABCC11Q96J66 1382 aa14.06□□□□□ -0.16
C9orf3-214ENST00000473778 CD163L1Q9NR16 1453 aa14.06□□□□□ -0.16
C9orf3-214ENST00000473778 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
C9orf3-214ENST00000473778 YEATS2Q9ULM3 1422 aa14.06□□□□□ -0.16
C9orf3-214ENST00000473778 PTPRMP28827 1452 aa14.06□□□□□ -0.16
C9orf3-214ENST00000473778 FRAT2O75474 233 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-214ENST00000473778 RICTORQ6R327 1708 aa14.05□□□□□ -0.16
C9orf3-214ENST00000473778 PUS7Q96PZ0 661 aaKnown RBP14.05□□□□□ -0.16
C9orf3-214ENST00000473778 NSD2O96028 1365 aa14.05□□□□□ -0.16
C9orf3-214ENST00000473778 DAXXQ9UER7 740 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-214ENST00000473778 MAPK8IP3Q9UPT6 1336 aa14.05□□□□□ -0.16
C9orf3-214ENST00000473778 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
C9orf3-214ENST00000473778 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms