RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 BCL9LQ86UU0 1499 aa19.18■□□□□ 0.66
TRAF4-209ENST00000473421 TRPC5Q9UL62 973 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-209ENST00000473421 COL22A1Q8NFW1 1626 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-209ENST00000473421 PXDNQ92626 1479 aa19.17■□□□□ 0.66
TRAF4-209ENST00000473421 PPLO60437 1756 aa19.17■□□□□ 0.66
TRAF4-209ENST00000473421 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
TRAF4-209ENST00000473421 FOXO3O43524 673 aa19.17■□□□□ 0.66
TRAF4-209ENST00000473421 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
TRAF4-209ENST00000473421 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
TRAF4-209ENST00000473421 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
TRAF4-209ENST00000473421 WAPLQ7Z5K2 1190 aa19.16■□□□□ 0.66
TRAF4-209ENST00000473421 ADGRF5Q8IZF2 1346 aa19.16■□□□□ 0.66
TRAF4-209ENST00000473421 HFM1A2PYH4 1435 aa19.15■□□□□ 0.66
TRAF4-209ENST00000473421 STK26Q9P289 416 aa19.14■□□□□ 0.65
TRAF4-209ENST00000473421 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
TRAF4-209ENST00000473421 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
TRAF4-209ENST00000473421 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
TRAF4-209ENST00000473421 CDC42BPGQ6DT37 1551 aa19.11■□□□□ 0.65
TRAF4-209ENST00000473421 NPHP3Q7Z494 1330 aa19.11■□□□□ 0.65
TRAF4-209ENST00000473421 TMEM132EQ6IEE7 984 aa19.11■□□□□ 0.65
TRAF4-209ENST00000473421 MARF1Q9Y4F3 1742 aaKnown RBP19.1■□□□□ 0.65
TRAF4-209ENST00000473421 RGL3Q3MIN7 710 aa19.09■□□□□ 0.65
TRAF4-209ENST00000473421 GJD4Q96KN9 370 aaPredicted RBP19.09■□□□□ 0.65
TRAF4-209ENST00000473421 GLI3P10071 1580 aa19.06■□□□□ 0.64
TRAF4-209ENST00000473421 ZRANB1Q9UGI0 708 aa19.05■□□□□ 0.64
TRAF4-209ENST00000473421 TECPR2O15040 1411 aa19.05■□□□□ 0.64
TRAF4-209ENST00000473421 SPATA31E1Q6ZUB1 1445 aa19.05■□□□□ 0.64
TRAF4-209ENST00000473421 LRPPRCP42704 1394 aaKnown RBP19.05■□□□□ 0.64
TRAF4-209ENST00000473421 SPATA31A3Q5VYP0 1347 aa19.04■□□□□ 0.64
TRAF4-209ENST00000473421 RALGAPBQ86X10 1494 aa19.03■□□□□ 0.64
TRAF4-209ENST00000473421 PLEKHG5O94827 1062 aa19.03■□□□□ 0.64
TRAF4-209ENST00000473421 CABLES1Q8TDN4 633 aa19.03■□□□□ 0.64
TRAF4-209ENST00000473421 SLIT2O94813 1529 aa19.03■□□□□ 0.64
TRAF4-209ENST00000473421 BRWD3Q6RI45 1802 aa19.02■□□□□ 0.64
TRAF4-209ENST00000473421 DEFB132Q7Z7B7 95 aa19.02■□□□□ 0.64
TRAF4-209ENST00000473421 UNC5CLQ8IV45 518 aa19.02■□□□□ 0.64
TRAF4-209ENST00000473421 ABCC11Q96J66 1382 aa19.02■□□□□ 0.64
TRAF4-209ENST00000473421 IFT172Q9UG01 1749 aa19.02■□□□□ 0.63
TRAF4-209ENST00000473421 RGPD8O14715 1765 aaPredicted RBP19.01■□□□□ 0.63
TRAF4-209ENST00000473421 FMN2Q9NZ56 1722 aa19.01■□□□□ 0.63
TRAF4-209ENST00000473421 KRT28Q7Z3Y7 464 aa19.01■□□□□ 0.63
TRAF4-209ENST00000473421 TNKS1BP1Q9C0C2 1729 aaKnown RBP19■□□□□ 0.63
TRAF4-209ENST00000473421 CCDC125Q86Z20 511 aa18.99■□□□□ 0.63
TRAF4-209ENST00000473421 PIK3C2GO75747 1445 aa18.99■□□□□ 0.63
TRAF4-209ENST00000473421 CCDC144AA2RUR9 1427 aa18.98■□□□□ 0.63
TRAF4-209ENST00000473421 YTHDC2Q9H6S0 1430 aaKnown RBP18.98■□□□□ 0.63
TRAF4-209ENST00000473421 KNDC1Q76NI1 1749 aa18.97■□□□□ 0.63
TRAF4-209ENST00000473421 USP32Q8NFA0 1604 aa18.97■□□□□ 0.63
TRAF4-209ENST00000473421 MPHOSPH9Q99550 1183 aa18.97■□□□□ 0.63
TRAF4-209ENST00000473421 SEPT12Q8IYM1 358 aa18.96■□□□□ 0.63
TRAF4-209ENST00000473421 ANKRD30BQ9BXX2 1392 aa18.95■□□□□ 0.62
TRAF4-209ENST00000473421 BLMP54132 1417 aaPredicted RBP18.94■□□□□ 0.62
TRAF4-209ENST00000473421 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
TRAF4-209ENST00000473421 CFAP70Q5T0N1 1121 aa18.94■□□□□ 0.62
TRAF4-209ENST00000473421 PHF8Q9UPP1 1060 aa18.94■□□□□ 0.62
TRAF4-209ENST00000473421 KIF1AQ12756 1690 aa18.93■□□□□ 0.62
TRAF4-209ENST00000473421 C14orf93Q9H972 538 aaKnown RBP18.93■□□□□ 0.62
TRAF4-209ENST00000473421 TNS3Q68CZ2 1445 aa18.92■□□□□ 0.62
TRAF4-209ENST00000473421 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
TRAF4-209ENST00000473421 VPS72Q15906 364 aa18.92■□□□□ 0.62
TRAF4-209ENST00000473421 PLCH1Q4KWH8 1693 aa18.92■□□□□ 0.62
TRAF4-209ENST00000473421 ONECUT3O60422 494 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-209ENST00000473421 LMOD2Q6P5Q4 547 aa18.9■□□□□ 0.62
TRAF4-209ENST00000473421 PMFBP1Q8TBY8 1022 aa18.9■□□□□ 0.62
TRAF4-209ENST00000473421 PRAM1Q96QH2 718 aa18.9■□□□□ 0.62
TRAF4-209ENST00000473421 ABCA3Q99758 1704 aa18.9■□□□□ 0.62
TRAF4-209ENST00000473421 SIRT1Q96EB6 747 aa18.89■□□□□ 0.61
TRAF4-209ENST00000473421 NRXN1Q9ULB1 1477 aa18.89■□□□□ 0.61
TRAF4-209ENST00000473421 HAP1P54257 671 aaPredicted RBP18.88■□□□□ 0.61
TRAF4-209ENST00000473421 CCDC9Q9Y3X0 531 aaKnown RBP18.88■□□□□ 0.61
TRAF4-209ENST00000473421 KRT27Q7Z3Y8 459 aa18.87■□□□□ 0.61
TRAF4-209ENST00000473421 SBNO1A3KN83 1393 aa18.86■□□□□ 0.61
TRAF4-209ENST00000473421 PSDA5PKW4 1024 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-209ENST00000473421 PSME1Q06323 249 aa18.86■□□□□ 0.61
TRAF4-209ENST00000473421 FAM182BQ5T319 152 aa18.86■□□□□ 0.61
TRAF4-209ENST00000473421 NWD2Q9ULI1 1742 aa18.86■□□□□ 0.61
TRAF4-209ENST00000473421 PRR36Q9H6K5 1346 aa18.84■□□□□ 0.61
TRAF4-209ENST00000473421 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
TRAF4-209ENST00000473421 HIRIP3Q9BW71 556 aaPredicted RBP18.84■□□□□ 0.61
TRAF4-209ENST00000473421 DHX57Q6P158 1386 aaKnown RBP18.83■□□□□ 0.61
TRAF4-209ENST00000473421 NRAPQ86VF7 1730 aa18.83■□□□□ 0.6
TRAF4-209ENST00000473421 TRPM3Q9HCF6 1732 aaPredicted RBP18.83■□□□□ 0.6
TRAF4-209ENST00000473421 SF3B2Q13435 895 aaKnown RBP18.81■□□□□ 0.6
TRAF4-209ENST00000473421 BTG4Q9NY30 223 aa18.81■□□□□ 0.6
TRAF4-209ENST00000473421 ARHGEF10O15013 1369 aa18.81■□□□□ 0.6
TRAF4-209ENST00000473421 A0A0G2JS52 829 aa18.8■□□□□ 0.6
TRAF4-209ENST00000473421 MYT1Q01538 1121 aa18.8■□□□□ 0.6
TRAF4-209ENST00000473421 EN1Q05925 392 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-209ENST00000473421 POGKQ9P215 609 aa18.79■□□□□ 0.6
TRAF4-209ENST00000473421 TRAK1Q9UPV9 953 aa18.79■□□□□ 0.6
TRAF4-209ENST00000473421 ADGRB1O14514 1584 aa18.79■□□□□ 0.6
TRAF4-209ENST00000473421 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
TRAF4-209ENST00000473421 MINK1Q8N4C8 1332 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-209ENST00000473421 HRCP23327 699 aa18.78■□□□□ 0.6
TRAF4-209ENST00000473421 LRP5O75197 1615 aa18.78■□□□□ 0.6
TRAF4-209ENST00000473421 DLC1Q96QB1 1528 aa18.77■□□□□ 0.6
TRAF4-209ENST00000473421 ACIN1Q9UKV3 1341 aaKnown RBP18.76■□□□□ 0.59
TRAF4-209ENST00000473421 ANKARQ7Z5J8 1434 aa18.76■□□□□ 0.59
TRAF4-209ENST00000473421 ADGRB2O60241 1585 aa18.76■□□□□ 0.59
TRAF4-209ENST00000473421 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms