RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TRPM2O94759 1503 aa13.88□□□□□ -0.19
APTX-216ENST00000472896 ITGAEP38570 1179 aa13.88□□□□□ -0.19
APTX-216ENST00000472896 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
APTX-216ENST00000472896 TIMELESSQ9UNS1 1208 aa13.88□□□□□ -0.19
APTX-216ENST00000472896 DCCP43146 1447 aa13.88□□□□□ -0.19
APTX-216ENST00000472896 NHSL1Q5SYE7 1610 aa13.87□□□□□ -0.19
APTX-216ENST00000472896 METP08581 1390 aa13.87□□□□□ -0.19
APTX-216ENST00000472896 E9PCH4 1651 aa13.87□□□□□ -0.19
APTX-216ENST00000472896 UNC13BO14795 1591 aa13.86□□□□□ -0.19
APTX-216ENST00000472896 ANP32CO43423 234 aa13.85□□□□□ -0.19
APTX-216ENST00000472896 XRN1Q8IZH2 1706 aaKnown RBP13.84□□□□□ -0.19
APTX-216ENST00000472896 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
APTX-216ENST00000472896 USP21Q9UK80 565 aa13.83□□□□□ -0.2
APTX-216ENST00000472896 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
APTX-216ENST00000472896 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
APTX-216ENST00000472896 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
APTX-216ENST00000472896 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
APTX-216ENST00000472896 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
APTX-216ENST00000472896 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
APTX-216ENST00000472896 ADGRL3Q9HAR2 1447 aa13.81□□□□□ -0.2
APTX-216ENST00000472896 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
APTX-216ENST00000472896 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
APTX-216ENST00000472896 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
APTX-216ENST00000472896 SOS2Q07890 1332 aaPredicted RBP13.8□□□□□ -0.2
APTX-216ENST00000472896 NUP155O75694 1391 aa13.79□□□□□ -0.2
APTX-216ENST00000472896 ZNF326Q5BKZ1 582 aaKnown RBP13.79□□□□□ -0.2
APTX-216ENST00000472896 PPP4R2Q9NY27 417 aa13.79□□□□□ -0.2
APTX-216ENST00000472896 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
APTX-216ENST00000472896 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
APTX-216ENST00000472896 ATRNO75882 1429 aa13.77□□□□□ -0.2
APTX-216ENST00000472896 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.21
APTX-216ENST00000472896 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
APTX-216ENST00000472896 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
APTX-216ENST00000472896 ROBO2Q9HCK4 1378 aa13.74□□□□□ -0.21
APTX-216ENST00000472896 PTCH1Q13635 1447 aa13.74□□□□□ -0.21
APTX-216ENST00000472896 LAMC1P11047 1609 aa13.74□□□□□ -0.21
APTX-216ENST00000472896 BCL9LQ86UU0 1499 aa13.73□□□□□ -0.21
APTX-216ENST00000472896 CCDC125Q86Z20 511 aa13.73□□□□□ -0.21
APTX-216ENST00000472896 RAB3GAP2Q9H2M9 1393 aa13.73□□□□□ -0.21
APTX-216ENST00000472896 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
APTX-216ENST00000472896 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.22
APTX-216ENST00000472896 NEXMIFQ5QGS0 1516 aa13.7□□□□□ -0.22
APTX-216ENST00000472896 MYOM2P54296 1465 aa13.7□□□□□ -0.22
APTX-216ENST00000472896 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
APTX-216ENST00000472896 DEFB132Q7Z7B7 95 aa13.69□□□□□ -0.22
APTX-216ENST00000472896 UBE2Q2Q8WVN8 375 aa13.69□□□□□ -0.22
APTX-216ENST00000472896 SPHKAPQ2M3C7 1700 aa13.69□□□□□ -0.22
APTX-216ENST00000472896 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
APTX-216ENST00000472896 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
APTX-216ENST00000472896 FOXO3O43524 673 aa13.68□□□□□ -0.22
APTX-216ENST00000472896 CLTCL1P53675 1640 aa13.67□□□□□ -0.22
APTX-216ENST00000472896 EP400Q96L91 3159 aa13.66□□□□□ -0.22
APTX-216ENST00000472896 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
APTX-216ENST00000472896 PXDNQ92626 1479 aa13.65□□□□□ -0.22
APTX-216ENST00000472896 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
APTX-216ENST00000472896 VGFO15240 615 aaPredicted RBP13.65□□□□□ -0.22
APTX-216ENST00000472896 UNC5CLQ8IV45 518 aa13.65□□□□□ -0.22
APTX-216ENST00000472896 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
APTX-216ENST00000472896 BLMP54132 1417 aaPredicted RBP13.64□□□□□ -0.23
APTX-216ENST00000472896 RALGAPBQ86X10 1494 aa13.64□□□□□ -0.23
APTX-216ENST00000472896 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
APTX-216ENST00000472896 GLI3P10071 1580 aa13.63□□□□□ -0.23
APTX-216ENST00000472896 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
APTX-216ENST00000472896 NBR1Q14596 966 aa13.62□□□□□ -0.23
APTX-216ENST00000472896 SEPT12Q8IYM1 358 aa13.62□□□□□ -0.23
APTX-216ENST00000472896 IPO9Q96P70 1041 aaKnown RBP13.62□□□□□ -0.23
APTX-216ENST00000472896 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
APTX-216ENST00000472896 PRAG1Q86YV5 1406 aa13.62□□□□□ -0.23
APTX-216ENST00000472896 SLIT2O94813 1529 aa13.61□□□□□ -0.23
APTX-216ENST00000472896 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
APTX-216ENST00000472896 WAPLQ7Z5K2 1190 aa13.61□□□□□ -0.23
APTX-216ENST00000472896 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
APTX-216ENST00000472896 KIF1BO60333 1816 aa13.59□□□□□ -0.23
APTX-216ENST00000472896 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
APTX-216ENST00000472896 STK26Q9P289 416 aa13.59□□□□□ -0.23
APTX-216ENST00000472896 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
APTX-216ENST00000472896 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
APTX-216ENST00000472896 WASHC2AQ641Q2 1341 aa13.59□□□□□ -0.23
APTX-216ENST00000472896 NAIPQ13075 1403 aa13.59□□□□□ -0.23
APTX-216ENST00000472896 C11orf95C9JLR9 678 aaPredicted RBP13.58□□□□□ -0.23
APTX-216ENST00000472896 ONECUT3O60422 494 aaPredicted RBP13.58□□□□□ -0.23
APTX-216ENST00000472896 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.23
APTX-216ENST00000472896 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
APTX-216ENST00000472896 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
APTX-216ENST00000472896 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
APTX-216ENST00000472896 CABLES1Q8TDN4 633 aa13.58□□□□□ -0.24
APTX-216ENST00000472896 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
APTX-216ENST00000472896 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
APTX-216ENST00000472896 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
APTX-216ENST00000472896 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
APTX-216ENST00000472896 CDC42BPGQ6DT37 1551 aa13.57□□□□□ -0.24
APTX-216ENST00000472896 VPS72Q15906 364 aa13.56□□□□□ -0.24
APTX-216ENST00000472896 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
APTX-216ENST00000472896 LRPPRCP42704 1394 aaKnown RBP13.56□□□□□ -0.24
APTX-216ENST00000472896 PLEKHH1Q9ULM0 1364 aa13.56□□□□□ -0.24
APTX-216ENST00000472896 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
APTX-216ENST00000472896 SIN3AQ96ST3 1273 aa13.55□□□□□ -0.24
APTX-216ENST00000472896 LRP5O75197 1615 aa13.55□□□□□ -0.24
APTX-216ENST00000472896 TMEM132EQ6IEE7 984 aa13.54□□□□□ -0.24
APTX-216ENST00000472896 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms