RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 HOXB3P14651 431 aaPredicted RBP4.36□□□□□ -1.71
TTC3-214ENST00000472398 UPF1Q92900 1129 aaKnown RBP eCLIP4.36□□□□□ -1.71
TTC3-214ENST00000472398 CCDC97Q96F63 343 aaPredicted RBP4.36□□□□□ -1.71
TTC3-214ENST00000472398 GPATCH3Q96I76 525 aa4.36□□□□□ -1.71
TTC3-214ENST00000472398 ZSWIM6Q9HCJ5 1215 aa4.35□□□□□ -1.71
TTC3-214ENST00000472398 SERPINA10Q9UK55 444 aa4.35□□□□□ -1.71
TTC3-214ENST00000472398 PCDHGA4Q9Y5G9 962 aa4.35□□□□□ -1.71
TTC3-214ENST00000472398 GPIHBP1Q8IV16 184 aa4.35□□□□□ -1.71
TTC3-214ENST00000472398 VTI1AQ96AJ9 217 aa4.35□□□□□ -1.71
TTC3-214ENST00000472398 MRRFQ96E11 262 aaKnown RBP4.35□□□□□ -1.71
TTC3-214ENST00000472398 MCM6Q14566 821 aa4.34□□□□□ -1.71
TTC3-214ENST00000472398 PROSER2Q86WR7 435 aaPredicted RBP4.34□□□□□ -1.71
TTC3-214ENST00000472398 DRC1Q96MC2 740 aa4.34□□□□□ -1.71
TTC3-214ENST00000472398 EPAS1Q99814 870 aa4.34□□□□□ -1.71
TTC3-214ENST00000472398 CDCA7Q9BWT1 371 aaPredicted RBP4.34□□□□□ -1.71
TTC3-214ENST00000472398 PHF14O94880 888 aa4.34□□□□□ -1.72
TTC3-214ENST00000472398 RINLQ6ZS11 566 aa4.34□□□□□ -1.72
TTC3-214ENST00000472398 SREK1Q8WXA9 508 aaKnown RBP4.34□□□□□ -1.72
TTC3-214ENST00000472398 PRIM1P49642 420 aaKnown RBP4.33□□□□□ -1.72
TTC3-214ENST00000472398 RGS19P49795 217 aa4.33□□□□□ -1.72
TTC3-214ENST00000472398 DOK7Q18PE1 504 aa4.33□□□□□ -1.72
TTC3-214ENST00000472398 TXNDC2Q86VQ3 553 aa4.33□□□□□ -1.72
TTC3-214ENST00000472398 PPP1R1BQ9UD71 204 aaPredicted RBP4.33□□□□□ -1.72
TTC3-214ENST00000472398 RBM47A0AV96 593 aaKnown RBP4.33□□□□□ -1.72
TTC3-214ENST00000472398 PAX3P23760 479 aa4.33□□□□□ -1.72
TTC3-214ENST00000472398 SKIV2LQ15477 1246 aaKnown RBP4.33□□□□□ -1.72
TTC3-214ENST00000472398 JPH4Q96JJ6 628 aa4.33□□□□□ -1.72
TTC3-214ENST00000472398 MTA3Q9BTC8 594 aa4.33□□□□□ -1.72
TTC3-214ENST00000472398 IVNS1ABPQ9Y6Y0 642 aa4.33□□□□□ -1.72
TTC3-214ENST00000472398 CCER2I3L3R5 266 aa4.32□□□□□ -1.72
TTC3-214ENST00000472398 PARNO95453 639 aaKnown RBP4.32□□□□□ -1.72
TTC3-214ENST00000472398 PDE4DQ08499 809 aa4.32□□□□□ -1.72
TTC3-214ENST00000472398 MYBPC2Q14324 1141 aa4.32□□□□□ -1.72
TTC3-214ENST00000472398 SND1Q7KZF4 910 aaKnown RBP eCLIP4.32□□□□□ -1.72
TTC3-214ENST00000472398 GRXCR2A6NFK2 248 aa4.32□□□□□ -1.72
TTC3-214ENST00000472398 EN1Q05925 392 aaPredicted RBP4.32□□□□□ -1.72
TTC3-214ENST00000472398 TSHZ1Q6ZSZ6 1077 aa4.32□□□□□ -1.72
TTC3-214ENST00000472398 AK7Q96M32 723 aa4.32□□□□□ -1.72
TTC3-214ENST00000472398 PNMA2Q9UL42 364 aa4.32□□□□□ -1.72
TTC3-214ENST00000472398 GPR153Q6NV75 609 aa4.31□□□□□ -1.72
TTC3-214ENST00000472398 SLAIN1Q8ND83 568 aa4.31□□□□□ -1.72
TTC3-214ENST00000472398 DDX12PQ92771 950 aa4.31□□□□□ -1.72
TTC3-214ENST00000472398 STAC3Q96MF2 364 aa4.31□□□□□ -1.72
TTC3-214ENST00000472398 FCHSD2O94868 740 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 HIC1Q14526 733 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 LONRF3Q496Y0 759 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 TYW1BQ6NUM6 668 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 PMM1Q92871 262 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 SH3BP1Q9Y3L3 701 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 PCDHGA10Q9Y5H3 936 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 MINK1Q8N4C8 1332 aaPredicted RBP4.3□□□□□ -1.72
TTC3-214ENST00000472398 CLGNO14967 610 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 TRIM66O15016 1216 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 CREB3O43889 395 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 TCF3P15923 654 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 PTGDRQ13258 359 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 KRBA2Q6ZNG9 492 aa4.3□□□□□ -1.72
TTC3-214ENST00000472398 RIMBP2O15034 1052 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 SSFA2P28290 1259 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 MCCD1P59942 119 aaPredicted RBP4.29□□□□□ -1.72
TTC3-214ENST00000472398 KCNA1Q09470 495 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 MAP2K5Q13163 448 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 RBM46Q8TBY0 533 aaKnown RBP4.29□□□□□ -1.72
TTC3-214ENST00000472398 ZNF622Q969S3 477 aaKnown RBP eCLIP4.29□□□□□ -1.721e-6■□□□□ 11.1
TTC3-214ENST00000472398 NPDC1Q9NQX5 325 aaPredicted RBP4.29□□□□□ -1.72
TTC3-214ENST00000472398 GNPATO15228 680 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 KIF4AO95239 1232 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 APLP1P51693 650 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 RHBDL3P58872 404 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 CCDC96Q2M329 555 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 ZFYVE27Q5T4F4 411 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 CLEC4GQ6UXB4 293 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 MORC4Q8TE76 937 aa4.29□□□□□ -1.72
TTC3-214ENST00000472398 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.29□□□□□ -1.72
TTC3-214ENST00000472398 CCDC194A0A1B0GVG4 234 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 MMP14P50281 582 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 CCDC184Q52MB2 194 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 GABBR1Q9UBS5 961 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 NUTM2FA1L443 756 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 PSDA5PKW4 1024 aaPredicted RBP4.28□□□□□ -1.72
TTC3-214ENST00000472398 ERCC3P19447 782 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 INSM1Q01101 510 aaPredicted RBP4.28□□□□□ -1.72
TTC3-214ENST00000472398 NOM1Q5C9Z4 860 aaKnown RBP4.28□□□□□ -1.72
TTC3-214ENST00000472398 SDR16C5Q8N3Y7 309 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.28□□□□□ -1.72
TTC3-214ENST00000472398 UBXN4Q92575 508 aa4.28□□□□□ -1.72
TTC3-214ENST00000472398 IRF6O14896 467 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 U2SURPO15042 1029 aaKnown RBP4.27□□□□□ -1.73
TTC3-214ENST00000472398 HOXB1P14653 301 aaPredicted RBP4.27□□□□□ -1.73
TTC3-214ENST00000472398 PSME1Q06323 249 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 AMHR2Q16671 573 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 ARSIQ5FYB1 569 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 TTC13Q8NBP0 860 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 CERKQ8TCT0 537 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 ZNF775Q96BV0 537 aaPredicted RBP4.27□□□□□ -1.73
TTC3-214ENST00000472398 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 MAF1Q9H063 256 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 FAM181BA6NEQ2 426 aa4.27□□□□□ -1.73
TTC3-214ENST00000472398 DPH6Q7L8W6 267 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms