RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 DHX57Q6P158 1386 aaKnown RBP21.99■■□□□ 1.11
CALD1-215ENST00000472096 MST1RQ04912 1400 aa21.99■■□□□ 1.11
CALD1-215ENST00000472096 YTHDC2Q9H6S0 1430 aaKnown RBP21.99■■□□□ 1.11
CALD1-215ENST00000472096 RNF39Q9H2S5 420 aa21.99■■□□□ 1.11
CALD1-215ENST00000472096 C14orf93Q9H972 538 aaKnown RBP21.98■■□□□ 1.11
CALD1-215ENST00000472096 ADGRB1O14514 1584 aa21.98■■□□□ 1.11
CALD1-215ENST00000472096 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
CALD1-215ENST00000472096 CDC42BPGQ6DT37 1551 aa21.98■■□□□ 1.11
CALD1-215ENST00000472096 COL16A1Q07092 1604 aaPredicted RBP21.97■■□□□ 1.11
CALD1-215ENST00000472096 AHDC1Q5TGY3 1603 aaPredicted RBP21.97■■□□□ 1.11
CALD1-215ENST00000472096 TMEM132EQ6IEE7 984 aa21.96■■□□□ 1.11
CALD1-215ENST00000472096 ABCC11Q96J66 1382 aa21.96■■□□□ 1.11
CALD1-215ENST00000472096 NHSL1Q5SYE7 1610 aa21.95■■□□□ 1.1
CALD1-215ENST00000472096 CFAP70Q5T0N1 1121 aa21.95■■□□□ 1.1
CALD1-215ENST00000472096 DCAF11Q8TEB1 546 aa21.95■■□□□ 1.1
CALD1-215ENST00000472096 KIAA1210Q9ULL0 1709 aa21.94■■□□□ 1.1
CALD1-215ENST00000472096 STAC3Q96MF2 364 aa21.93■■□□□ 1.1
CALD1-215ENST00000472096 DLC1Q96QB1 1528 aa21.93■■□□□ 1.1
CALD1-215ENST00000472096 STK26Q9P289 416 aa21.93■■□□□ 1.1
CALD1-215ENST00000472096 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
CALD1-215ENST00000472096 FMN2Q9NZ56 1722 aa21.91■■□□□ 1.1
CALD1-215ENST00000472096 PLEKHH1Q9ULM0 1364 aa21.9■■□□□ 1.1
CALD1-215ENST00000472096 ARHGEF28Q8N1W1 1705 aaKnown RBP21.89■■□□□ 1.1
CALD1-215ENST00000472096 DISP3Q9P2K9 1392 aa21.89■■□□□ 1.1
CALD1-215ENST00000472096 C1orf167Q5SNV9 1468 aa21.89■■□□□ 1.09
CALD1-215ENST00000472096 BRINP3Q76B58 766 aa21.88■■□□□ 1.09
CALD1-215ENST00000472096 WAPLQ7Z5K2 1190 aa21.87■■□□□ 1.09
CALD1-215ENST00000472096 SHPRHQ149N8 1683 aa21.87■■□□□ 1.09
CALD1-215ENST00000472096 SIRT1Q96EB6 747 aa21.85■■□□□ 1.09
CALD1-215ENST00000472096 ADGRB2O60241 1585 aa21.85■■□□□ 1.09
CALD1-215ENST00000472096 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
CALD1-215ENST00000472096 RGPD8O14715 1765 aaPredicted RBP21.83■■□□□ 1.09
CALD1-215ENST00000472096 JCADQ9P266 1359 aa21.81■■□□□ 1.08
CALD1-215ENST00000472096 TRPM1Q7Z4N2 1603 aa21.8■■□□□ 1.08
CALD1-215ENST00000472096 KIF1AQ12756 1690 aa21.79■■□□□ 1.08
CALD1-215ENST00000472096 PRAM1Q96QH2 718 aa21.79■■□□□ 1.08
CALD1-215ENST00000472096 L3MBTL2Q969R5 705 aa21.77■■□□□ 1.08
CALD1-215ENST00000472096 TRAK1Q9UPV9 953 aa21.77■■□□□ 1.08
CALD1-215ENST00000472096 USP32Q8NFA0 1604 aa21.77■■□□□ 1.07
CALD1-215ENST00000472096 NEUROD1Q13562 356 aa21.76■■□□□ 1.07
CALD1-215ENST00000472096 ORAI2Q96SN7 254 aa21.76■■□□□ 1.07
CALD1-215ENST00000472096 SAFB2Q14151 953 aaKnown RBP eCLIP21.75■■□□□ 1.07
CALD1-215ENST00000472096 POGKQ9P215 609 aa21.74■■□□□ 1.07
CALD1-215ENST00000472096 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
CALD1-215ENST00000472096 C1QBPQ07021 282 aaKnown RBP21.72■■□□□ 1.07
CALD1-215ENST00000472096 LRP6O75581 1613 aa21.72■■□□□ 1.07
CALD1-215ENST00000472096 NUTM2FA1L443 756 aa21.71■■□□□ 1.07
CALD1-215ENST00000472096 PXDNQ92626 1479 aa21.71■■□□□ 1.07
CALD1-215ENST00000472096 QRICH2Q9H0J4 1663 aa21.7■■□□□ 1.06
CALD1-215ENST00000472096 ITSN1Q15811 1721 aa21.7■■□□□ 1.06
CALD1-215ENST00000472096 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
CALD1-215ENST00000472096 ESCO1Q5FWF5 840 aa21.7■■□□□ 1.06
CALD1-215ENST00000472096 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.06
CALD1-215ENST00000472096 SPINK5Q9NQ38 1064 aaPredicted RBP21.69■■□□□ 1.06
CALD1-215ENST00000472096 SOS2Q07890 1332 aaPredicted RBP21.69■■□□□ 1.06
CALD1-215ENST00000472096 SPATA31A6Q5VVP1 1343 aa21.69■■□□□ 1.06
CALD1-215ENST00000472096 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
CALD1-215ENST00000472096 COL22A1Q8NFW1 1626 aaPredicted RBP21.69■■□□□ 1.06
CALD1-215ENST00000472096 MINK1Q8N4C8 1332 aaPredicted RBP21.68■■□□□ 1.06
CALD1-215ENST00000472096 PNPLA6Q8IY17 1366 aa21.68■■□□□ 1.06
CALD1-215ENST00000472096 NPHP3Q7Z494 1330 aa21.67■■□□□ 1.06
CALD1-215ENST00000472096 TONSLQ96HA7 1378 aa21.66■■□□□ 1.06
CALD1-215ENST00000472096 ILDR2Q71H61 639 aa21.66■■□□□ 1.06
CALD1-215ENST00000472096 LRRC59Q96AG4 307 aaKnown RBP21.66■■□□□ 1.06
CALD1-215ENST00000472096 HIRIP3Q9BW71 556 aaPredicted RBP21.66■■□□□ 1.06
CALD1-215ENST00000472096 EIF3AQ14152 1382 aaKnown RBP21.65■■□□□ 1.06
CALD1-215ENST00000472096 TOPAZ1Q8N9V7 1692 aa21.65■■□□□ 1.06
CALD1-215ENST00000472096 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
CALD1-215ENST00000472096 ATP7BP35670 1465 aa21.62■■□□□ 1.05
CALD1-215ENST00000472096 ROCK2O75116 1388 aaKnown RBP21.61■■□□□ 1.05
CALD1-215ENST00000472096 FOXO3O43524 673 aa21.61■■□□□ 1.05
CALD1-215ENST00000472096 TRPM3Q9HCF6 1732 aaPredicted RBP21.6■■□□□ 1.05
CALD1-215ENST00000472096 RALGAPBQ86X10 1494 aa21.6■■□□□ 1.05
CALD1-215ENST00000472096 WASLO00401 505 aaPredicted RBP21.6■■□□□ 1.05
CALD1-215ENST00000472096 ZNF219Q9P2Y4 722 aaPredicted RBP21.6■■□□□ 1.05
CALD1-215ENST00000472096 PHF8Q9UPP1 1060 aa21.6■■□□□ 1.05
CALD1-215ENST00000472096 MARF1Q9Y4F3 1742 aaKnown RBP21.6■■□□□ 1.05
CALD1-215ENST00000472096 PRR36Q9H6K5 1346 aa21.59■■□□□ 1.05
CALD1-215ENST00000472096 XPCQ01831 940 aaPredicted RBP21.59■■□□□ 1.05
CALD1-215ENST00000472096 NBPF8Q3BBV2 869 aa21.59■■□□□ 1.05
CALD1-215ENST00000472096 RGS17Q9UGC6 210 aaPredicted RBP21.59■■□□□ 1.05
CALD1-215ENST00000472096 GPRASP1Q5JY77 1395 aa21.59■■□□□ 1.05
CALD1-215ENST00000472096 CENPJQ9HC77 1338 aaPredicted RBP21.58■■□□□ 1.05
CALD1-215ENST00000472096 ABCA3Q99758 1704 aa21.57■■□□□ 1.04
CALD1-215ENST00000472096 NUTM2BA6NNL0 878 aaPredicted RBP21.56■■□□□ 1.04
CALD1-215ENST00000472096 NUTM2EB1AL46 878 aaPredicted RBP21.56■■□□□ 1.04
CALD1-215ENST00000472096 CAPN15O75808 1086 aa21.56■■□□□ 1.04
CALD1-215ENST00000472096 NUTM2AQ8IVF1 878 aaPredicted RBP21.56■■□□□ 1.04
CALD1-215ENST00000472096 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
CALD1-215ENST00000472096 TNS3Q68CZ2 1445 aa21.55■■□□□ 1.04
CALD1-215ENST00000472096 ALS2Q96Q42 1657 aa21.54■■□□□ 1.04
CALD1-215ENST00000472096 KRT28Q7Z3Y7 464 aa21.52■■□□□ 1.04
CALD1-215ENST00000472096 PMFBP1Q8TBY8 1022 aa21.52■■□□□ 1.04
CALD1-215ENST00000472096 SPATA31A3Q5VYP0 1347 aa21.52■■□□□ 1.03
CALD1-215ENST00000472096 SBNO1A3KN83 1393 aa21.51■■□□□ 1.03
CALD1-215ENST00000472096 CDK19Q9BWU1 502 aa21.51■■□□□ 1.03
CALD1-215ENST00000472096 CLSPNQ9HAW4 1339 aa21.51■■□□□ 1.03
CALD1-215ENST00000472096 POTEAQ6S8J7 498 aa21.49■■□□□ 1.03
CALD1-215ENST00000472096 NUDT16Q96DE0 195 aaKnown RBP21.49■■□□□ 1.03
CALD1-215ENST00000472096 CRYBG1Q9Y4K1 1723 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms