RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 SLC4A3P48751 1232 aa13.91□□□□□ -0.18
CHMP2B-203ENST00000471660 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
CHMP2B-203ENST00000471660 EXOC6Q8TAG9 804 aa13.91□□□□□ -0.18
CHMP2B-203ENST00000471660 MAP7D2Q96T17 732 aa13.91□□□□□ -0.18
CHMP2B-203ENST00000471660 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
CHMP2B-203ENST00000471660 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
CHMP2B-203ENST00000471660 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHMP2B-203ENST00000471660 ERBINQ96RT1 1412 aa13.91□□□□□ -0.18
CHMP2B-203ENST00000471660 COL16A1Q07092 1604 aaPredicted RBP13.9□□□□□ -0.18
CHMP2B-203ENST00000471660 TAF7LQ5H9L4 462 aa13.9□□□□□ -0.18
CHMP2B-203ENST00000471660 SMAP1Q8IYB5 467 aaPredicted RBP13.9□□□□□ -0.18
CHMP2B-203ENST00000471660 LRP6O75581 1613 aa13.9□□□□□ -0.18
CHMP2B-203ENST00000471660 KIF15Q9NS87 1388 aa13.9□□□□□ -0.18
CHMP2B-203ENST00000471660 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
CHMP2B-203ENST00000471660 IQGAP3Q86VI3 1631 aa13.88□□□□□ -0.19
CHMP2B-203ENST00000471660 SPATA31A6Q5VVP1 1343 aa13.88□□□□□ -0.19
CHMP2B-203ENST00000471660 RXRBP28702 533 aa13.88□□□□□ -0.19
CHMP2B-203ENST00000471660 VIRMAQ69YN4 1812 aaKnown RBP13.87□□□□□ -0.19
CHMP2B-203ENST00000471660 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
CHMP2B-203ENST00000471660 TERF1P54274 439 aa13.87□□□□□ -0.19
CHMP2B-203ENST00000471660 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHMP2B-203ENST00000471660 ESPNB1AK53 854 aa13.86□□□□□ -0.19
CHMP2B-203ENST00000471660 SYCP2Q9BX26 1530 aa13.86□□□□□ -0.19
CHMP2B-203ENST00000471660 FAM161AQ3B820 660 aa13.85□□□□□ -0.19
CHMP2B-203ENST00000471660 ZNF777Q9ULD5 760 aaPredicted RBP13.85□□□□□ -0.19
CHMP2B-203ENST00000471660 NCLP19338 710 aaKnown RBP13.84□□□□□ -0.19
CHMP2B-203ENST00000471660 UTP14CQ5TAP6 766 aaKnown RBP13.84□□□□□ -0.19
CHMP2B-203ENST00000471660 STAC3Q96MF2 364 aa13.84□□□□□ -0.19
CHMP2B-203ENST00000471660 RGS12O14924 1447 aa13.83□□□□□ -0.2
CHMP2B-203ENST00000471660 NUP155O75694 1391 aa13.83□□□□□ -0.2
CHMP2B-203ENST00000471660 L3MBTL2Q969R5 705 aa13.83□□□□□ -0.2
CHMP2B-203ENST00000471660 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.2
CHMP2B-203ENST00000471660 C8orf34Q49A92 452 aa13.82□□□□□ -0.2
CHMP2B-203ENST00000471660 IFFO2Q5TF58 517 aa13.82□□□□□ -0.2
CHMP2B-203ENST00000471660 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
CHMP2B-203ENST00000471660 SPAG9O60271 1321 aaKnown RBP13.82□□□□□ -0.2
CHMP2B-203ENST00000471660 KTN1Q86UP2 1357 aaKnown RBP13.82□□□□□ -0.2
CHMP2B-203ENST00000471660 MRE11P49959 708 aa13.82□□□□□ -0.2
CHMP2B-203ENST00000471660 LAMC1P11047 1609 aa13.82□□□□□ -0.2
CHMP2B-203ENST00000471660 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 SPATA31E1Q6ZUB1 1445 aa13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 GTF2E1P29083 439 aaPredicted RBP13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 BBXQ8WY36 941 aaPredicted RBP13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 RALGAPBQ86X10 1494 aa13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 ABCC3O15438 1527 aa13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 MEX3CQ5U5Q3 659 aaKnown RBP13.81□□□□□ -0.2
CHMP2B-203ENST00000471660 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
CHMP2B-203ENST00000471660 AHDC1Q5TGY3 1603 aaPredicted RBP13.8□□□□□ -0.2
CHMP2B-203ENST00000471660 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
CHMP2B-203ENST00000471660 KDM2BQ8NHM5 1336 aa13.79□□□□□ -0.2
CHMP2B-203ENST00000471660 LRPPRCP42704 1394 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-203ENST00000471660 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-203ENST00000471660 UBR1Q8IWV7 1749 aa13.79□□□□□ -0.2
CHMP2B-203ENST00000471660 PANK2Q9BZ23 570 aa13.79□□□□□ -0.2
CHMP2B-203ENST00000471660 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
CHMP2B-203ENST00000471660 DHX29Q7Z478 1369 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-203ENST00000471660 NWD1Q149M9 1564 aa13.78□□□□□ -0.2
CHMP2B-203ENST00000471660 NHSL1Q5SYE7 1610 aa13.78□□□□□ -0.2
CHMP2B-203ENST00000471660 ROCK2O75116 1388 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-203ENST00000471660 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.2
CHMP2B-203ENST00000471660 GGT6Q6P531 493 aa13.78□□□□□ -0.2
CHMP2B-203ENST00000471660 IPO4Q8TEX9 1081 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-203ENST00000471660 SLIT1O75093 1534 aa13.77□□□□□ -0.2
CHMP2B-203ENST00000471660 ARHGAP23Q9P227 1491 aa13.77□□□□□ -0.2
CHMP2B-203ENST00000471660 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-203ENST00000471660 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-203ENST00000471660 ZNF326Q5BKZ1 582 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-203ENST00000471660 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-203ENST00000471660 PDE3BQ13370 1112 aa13.76□□□□□ -0.21
CHMP2B-203ENST00000471660 KIAA1211Q6ZU35 1233 aa13.76□□□□□ -0.21
CHMP2B-203ENST00000471660 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
CHMP2B-203ENST00000471660 TMEM94Q12767 1356 aa13.75□□□□□ -0.21
CHMP2B-203ENST00000471660 ANTXR1Q9H6X2 564 aa13.75□□□□□ -0.21
CHMP2B-203ENST00000471660 KDM5AP29375 1690 aaKnown RBP13.75□□□□□ -0.21
CHMP2B-203ENST00000471660 RIPK4P57078 832 aa13.74□□□□□ -0.21
CHMP2B-203ENST00000471660 DMTNQ08495 405 aa13.74□□□□□ -0.21
CHMP2B-203ENST00000471660 PRDM15P57071 1507 aaPredicted RBP13.74□□□□□ -0.21
CHMP2B-203ENST00000471660 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
CHMP2B-203ENST00000471660 BECN1Q14457 450 aa13.73□□□□□ -0.21
CHMP2B-203ENST00000471660 DIP2AQ14689 1571 aa13.73□□□□□ -0.21
CHMP2B-203ENST00000471660 FBXO31Q5XUX0 539 aaPredicted RBP13.73□□□□□ -0.21
CHMP2B-203ENST00000471660 KIF7Q2M1P5 1343 aa13.73□□□□□ -0.21
CHMP2B-203ENST00000471660 OFD1O75665 1012 aa13.73□□□□□ -0.21
CHMP2B-203ENST00000471660 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-203ENST00000471660 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
CHMP2B-203ENST00000471660 TET3O43151 1660 aa13.71□□□□□ -0.21
CHMP2B-203ENST00000471660 RBM6P78332 1123 aaKnown RBP13.71□□□□□ -0.21
CHMP2B-203ENST00000471660 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.71□□□□□ -0.21
CHMP2B-203ENST00000471660 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
CHMP2B-203ENST00000471660 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
CHMP2B-203ENST00000471660 GPRASP1Q5JY77 1395 aa13.7□□□□□ -0.22
CHMP2B-203ENST00000471660 TRIM44Q96DX7 344 aaPredicted RBP13.69□□□□□ -0.22
CHMP2B-203ENST00000471660 MSH6P52701 1360 aa13.69□□□□□ -0.22
CHMP2B-203ENST00000471660 USP19O94966 1318 aa13.69□□□□□ -0.22
CHMP2B-203ENST00000471660 AFF2P51816 1311 aa13.69□□□□□ -0.22
CHMP2B-203ENST00000471660 NBPF8Q3BBV2 869 aa13.68□□□□□ -0.22
CHMP2B-203ENST00000471660 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
CHMP2B-203ENST00000471660 ERVK-7P63135 1459 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms