RNA–Protein interactions for RNA: ENST00000471404.1

GMCL1-203, Transcript of germ cell-less, spermatogenesis associated 1, humanhuman

TSL 5

Gene GMCL1, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMCL1-203ENST00000471404 PRKD2Q9BZL6 878 aa12.03□□□□□ -0.48
GMCL1-203ENST00000471404 PRDM9Q9NQV7 894 aa12.03□□□□□ -0.48
GMCL1-203ENST00000471404 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
GMCL1-203ENST00000471404 RSBN1LQ6PCB5 846 aaPredicted RBP12.01□□□□□ -0.49
GMCL1-203ENST00000471404 C6orf229H3BNL8 230 aa11.99□□□□□ -0.49
GMCL1-203ENST00000471404 GJA5P36382 358 aa11.99□□□□□ -0.49
GMCL1-203ENST00000471404 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
GMCL1-203ENST00000471404 SPTLC1O15269 473 aa11.98□□□□□ -0.49
GMCL1-203ENST00000471404 RIC3Q7Z5B4 369 aa11.98□□□□□ -0.49
GMCL1-203ENST00000471404 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
GMCL1-203ENST00000471404 RETREG3Q86VR2 466 aa11.97□□□□□ -0.49
GMCL1-203ENST00000471404 FCF1Q9Y324 198 aaKnown RBP11.97□□□□□ -0.49
GMCL1-203ENST00000471404 MMP16P51512 607 aa11.96□□□□□ -0.49
GMCL1-203ENST00000471404 EMID1Q96A84 441 aaPredicted RBP11.96□□□□□ -0.49
GMCL1-203ENST00000471404 FAM117AQ9C073 453 aa11.96□□□□□ -0.49
GMCL1-203ENST00000471404 PCDHB15Q9Y5E8 787 aa11.96□□□□□ -0.49
GMCL1-203ENST00000471404 DXOO77932 396 aaKnown RBP11.95□□□□□ -0.5
GMCL1-203ENST00000471404 SLC19A1P41440 591 aa11.95□□□□□ -0.5
GMCL1-203ENST00000471404 NEUROD2Q15784 382 aa11.95□□□□□ -0.5
GMCL1-203ENST00000471404 PLA2G2CQ5R387 149 aa11.95□□□□□ -0.5
GMCL1-203ENST00000471404 MTMR2Q13614 643 aa11.94□□□□□ -0.5
GMCL1-203ENST00000471404 DDRGK1Q96HY6 314 aa11.94□□□□□ -0.5
GMCL1-203ENST00000471404 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
GMCL1-203ENST00000471404 JUNDP17535 347 aa11.93□□□□□ -0.5
GMCL1-203ENST00000471404 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
GMCL1-203ENST00000471404 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
GMCL1-203ENST00000471404 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
GMCL1-203ENST00000471404 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
GMCL1-203ENST00000471404 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
GMCL1-203ENST00000471404 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
GMCL1-203ENST00000471404 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
GMCL1-203ENST00000471404 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
GMCL1-203ENST00000471404 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
GMCL1-203ENST00000471404 IRX2Q9BZI1 471 aaPredicted RBP11.9□□□□□ -0.5
GMCL1-203ENST00000471404 ZBTB3Q9H5J0 574 aa11.9□□□□□ -0.5
GMCL1-203ENST00000471404 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
GMCL1-203ENST00000471404 HRCP23327 699 aa11.89□□□□□ -0.51
GMCL1-203ENST00000471404 TUSC1Q2TAM9 212 aa11.89□□□□□ -0.51
GMCL1-203ENST00000471404 PRPF38BQ5VTL8 546 aaKnown RBP11.89□□□□□ -0.51
GMCL1-203ENST00000471404 SPRYD7Q5W111 196 aa11.89□□□□□ -0.51
GMCL1-203ENST00000471404 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
GMCL1-203ENST00000471404 RPIAP49247 311 aa11.87□□□□□ -0.51
GMCL1-203ENST00000471404 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
GMCL1-203ENST00000471404 QPCTQ16769 361 aa11.86□□□□□ -0.51
GMCL1-203ENST00000471404 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
GMCL1-203ENST00000471404 LILRB3O75022 631 aa11.85□□□□□ -0.51
GMCL1-203ENST00000471404 SKIV2LQ15477 1246 aaKnown RBP11.85□□□□□ -0.51
GMCL1-203ENST00000471404 ZNF598Q86UK7 904 aaKnown RBP11.85□□□□□ -0.51
GMCL1-203ENST00000471404 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
GMCL1-203ENST00000471404 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
GMCL1-203ENST00000471404 CFAP99D6REC4 459 aa11.84□□□□□ -0.51
GMCL1-203ENST00000471404 ZBTB24O43167 697 aaPredicted RBP11.84□□□□□ -0.51
GMCL1-203ENST00000471404 ZNF697Q5TEC3 545 aa11.84□□□□□ -0.51
GMCL1-203ENST00000471404 NUTM2DQ5VT03 806 aaPredicted RBP11.84□□□□□ -0.51
GMCL1-203ENST00000471404 NUTM2AQ8IVF1 878 aaPredicted RBP11.84□□□□□ -0.51
GMCL1-203ENST00000471404 NUDT12Q9BQG2 462 aa11.84□□□□□ -0.51
GMCL1-203ENST00000471404 DESI1Q6ICB0 168 aa11.83□□□□□ -0.52
GMCL1-203ENST00000471404 CD2BP2O95400 341 aaKnown RBP11.82□□□□□ -0.52
GMCL1-203ENST00000471404 PTPRNQ16849 979 aa11.82□□□□□ -0.52
GMCL1-203ENST00000471404 IL27Q8NEV9 243 aa11.82□□□□□ -0.52
GMCL1-203ENST00000471404 GFRA3O60609 400 aa11.8□□□□□ -0.52
GMCL1-203ENST00000471404 CCNYL3P0C7X3 344 aa11.8□□□□□ -0.52
GMCL1-203ENST00000471404 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
GMCL1-203ENST00000471404 PROCA1Q8NCQ7 364 aaPredicted RBP11.8□□□□□ -0.52
GMCL1-203ENST00000471404 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
GMCL1-203ENST00000471404 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
GMCL1-203ENST00000471404 TRIM32Q13049 653 aa11.78□□□□□ -0.52
GMCL1-203ENST00000471404 LYPD8Q6UX82 237 aa11.78□□□□□ -0.52
GMCL1-203ENST00000471404 TRIM67Q6ZTA4 783 aa11.78□□□□□ -0.52
GMCL1-203ENST00000471404 TSC1Q92574 1164 aa11.78□□□□□ -0.52
GMCL1-203ENST00000471404 LAPTM4AQ15012 233 aa11.77□□□□□ -0.53
GMCL1-203ENST00000471404 PTCRAQ6ISU1 281 aaPredicted RBP11.77□□□□□ -0.53
GMCL1-203ENST00000471404 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.77□□□□□ -0.53
GMCL1-203ENST00000471404 EVA1BQ9NVM1 165 aa11.77□□□□□ -0.53
GMCL1-203ENST00000471404 GDF9O60383 454 aa11.75□□□□□ -0.53
GMCL1-203ENST00000471404 KCNH2Q12809 1159 aa11.75□□□□□ -0.53
GMCL1-203ENST00000471404 GOPCQ9HD26 462 aa11.75□□□□□ -0.53
GMCL1-203ENST00000471404 NRG2O14511 850 aaPredicted RBP11.74□□□□□ -0.53
GMCL1-203ENST00000471404 FOXC1Q12948 553 aa11.74□□□□□ -0.53
GMCL1-203ENST00000471404 FBXO31Q5XUX0 539 aaPredicted RBP11.74□□□□□ -0.53
GMCL1-203ENST00000471404 PKD2L1Q9P0L9 805 aa11.74□□□□□ -0.53
GMCL1-203ENST00000471404 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
GMCL1-203ENST00000471404 PRR20EP86478 221 aa11.73□□□□□ -0.53
GMCL1-203ENST00000471404 PRR20CP86479 221 aa11.73□□□□□ -0.53
GMCL1-203ENST00000471404 PRR20DP86480 221 aa11.73□□□□□ -0.53
GMCL1-203ENST00000471404 PRR20BP86481 221 aa11.73□□□□□ -0.53
GMCL1-203ENST00000471404 PRR20AP86496 221 aa11.73□□□□□ -0.53
GMCL1-203ENST00000471404 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
GMCL1-203ENST00000471404 PCMTD1Q96MG8 357 aaPredicted RBP11.73□□□□□ -0.53
GMCL1-203ENST00000471404 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
GMCL1-203ENST00000471404 CTHP32929 405 aa11.72□□□□□ -0.53
GMCL1-203ENST00000471404 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
GMCL1-203ENST00000471404 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
GMCL1-203ENST00000471404 F12P00748 615 aaPredicted RBP11.69□□□□□ -0.54
GMCL1-203ENST00000471404 WNT7BP56706 349 aa11.69□□□□□ -0.54
GMCL1-203ENST00000471404 SKOR1P84550 965 aa11.69□□□□□ -0.54
GMCL1-203ENST00000471404 Q6ZNB5 142 aa11.69□□□□□ -0.54
GMCL1-203ENST00000471404 MAP10Q9P2G4 905 aa11.69□□□□□ -0.54
GMCL1-203ENST00000471404 WNT7AO00755 349 aa11.68□□□□□ -0.54
GMCL1-203ENST00000471404 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms