RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
PPP1R3F-204ENST00000471261 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
PPP1R3F-204ENST00000471261 POGKQ9P215 609 aa18.24■□□□□ 0.51
PPP1R3F-204ENST00000471261 KNDC1Q76NI1 1749 aa18.23■□□□□ 0.51
PPP1R3F-204ENST00000471261 JCADQ9P266 1359 aa18.23■□□□□ 0.51
PPP1R3F-204ENST00000471261 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
PPP1R3F-204ENST00000471261 ORAI2Q96SN7 254 aa18.23■□□□□ 0.51
PPP1R3F-204ENST00000471261 ADGRB1O14514 1584 aa18.22■□□□□ 0.51
PPP1R3F-204ENST00000471261 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
PPP1R3F-204ENST00000471261 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
PPP1R3F-204ENST00000471261 COL16A1Q07092 1604 aaPredicted RBP18.21■□□□□ 0.51
PPP1R3F-204ENST00000471261 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.51
PPP1R3F-204ENST00000471261 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
PPP1R3F-204ENST00000471261 ILDR2Q71H61 639 aa18.19■□□□□ 0.5
PPP1R3F-204ENST00000471261 DLC1Q96QB1 1528 aa18.18■□□□□ 0.5
PPP1R3F-204ENST00000471261 LRRC59Q96AG4 307 aaKnown RBP18.17■□□□□ 0.5
PPP1R3F-204ENST00000471261 HIRIP3Q9BW71 556 aaPredicted RBP18.17■□□□□ 0.5
PPP1R3F-204ENST00000471261 MINK1Q8N4C8 1332 aaPredicted RBP18.16■□□□□ 0.5
PPP1R3F-204ENST00000471261 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
PPP1R3F-204ENST00000471261 NHSL1Q5SYE7 1610 aa18.14■□□□□ 0.49
PPP1R3F-204ENST00000471261 NUTM2BA6NNL0 878 aaPredicted RBP18.14■□□□□ 0.49
PPP1R3F-204ENST00000471261 NUTM2EB1AL46 878 aaPredicted RBP18.14■□□□□ 0.49
PPP1R3F-204ENST00000471261 FOXO3O43524 673 aa18.14■□□□□ 0.49
PPP1R3F-204ENST00000471261 MEX3CQ5U5Q3 659 aaKnown RBP18.14■□□□□ 0.49
PPP1R3F-204ENST00000471261 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
PPP1R3F-204ENST00000471261 SPATA31A6Q5VVP1 1343 aa18.14■□□□□ 0.49
PPP1R3F-204ENST00000471261 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
PPP1R3F-204ENST00000471261 PCGF6Q9BYE7 350 aa18.12■□□□□ 0.49
PPP1R3F-204ENST00000471261 NPHP3Q7Z494 1330 aa18.12■□□□□ 0.49
PPP1R3F-204ENST00000471261 SOS2Q07890 1332 aaPredicted RBP18.11■□□□□ 0.49
PPP1R3F-204ENST00000471261 FMN2Q9NZ56 1722 aa18.1■□□□□ 0.49
PPP1R3F-204ENST00000471261 PNPLA6Q8IY17 1366 aa18.09■□□□□ 0.49
PPP1R3F-204ENST00000471261 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
PPP1R3F-204ENST00000471261 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
PPP1R3F-204ENST00000471261 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
PPP1R3F-204ENST00000471261 LRP6O75581 1613 aa18.09■□□□□ 0.49
PPP1R3F-204ENST00000471261 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
PPP1R3F-204ENST00000471261 RGS17Q9UGC6 210 aaPredicted RBP18.08■□□□□ 0.48
PPP1R3F-204ENST00000471261 PHF8Q9UPP1 1060 aa18.08■□□□□ 0.48
PPP1R3F-204ENST00000471261 ARHGEF28Q8N1W1 1705 aaKnown RBP18.06■□□□□ 0.48
PPP1R3F-204ENST00000471261 ROCK2O75116 1388 aaKnown RBP18.06■□□□□ 0.48
PPP1R3F-204ENST00000471261 ADGRB2O60241 1585 aa18.06■□□□□ 0.48
PPP1R3F-204ENST00000471261 PMFBP1Q8TBY8 1022 aa18.06■□□□□ 0.48
PPP1R3F-204ENST00000471261 EIF3AQ14152 1382 aaKnown RBP18.05■□□□□ 0.48
PPP1R3F-204ENST00000471261 PXDNQ92626 1479 aa18.05■□□□□ 0.48
PPP1R3F-204ENST00000471261 ANKARQ7Z5J8 1434 aa18.05■□□□□ 0.48
PPP1R3F-204ENST00000471261 PSME1Q06323 249 aa18.04■□□□□ 0.48
PPP1R3F-204ENST00000471261 KRT28Q7Z3Y7 464 aa18.04■□□□□ 0.48
PPP1R3F-204ENST00000471261 CENPJQ9HC77 1338 aaPredicted RBP18.03■□□□□ 0.48
PPP1R3F-204ENST00000471261 ADAMTS2O95450 1211 aa18.03■□□□□ 0.48
PPP1R3F-204ENST00000471261 NBPF8Q3BBV2 869 aa18.03■□□□□ 0.48
PPP1R3F-204ENST00000471261 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
PPP1R3F-204ENST00000471261 PRR36Q9H6K5 1346 aa18.02■□□□□ 0.48
PPP1R3F-204ENST00000471261 C8orf37Q96NL8 207 aa18.02■□□□□ 0.48
PPP1R3F-204ENST00000471261 CDK19Q9BWU1 502 aa18.02■□□□□ 0.48
PPP1R3F-204ENST00000471261 TULP4Q9NRJ4 1543 aa18.02■□□□□ 0.47
PPP1R3F-204ENST00000471261 POTEAQ6S8J7 498 aa18.01■□□□□ 0.47
PPP1R3F-204ENST00000471261 RGPD8O14715 1765 aaPredicted RBP18.01■□□□□ 0.47
PPP1R3F-204ENST00000471261 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
PPP1R3F-204ENST00000471261 NUDT16Q96DE0 195 aaKnown RBP18■□□□□ 0.47
PPP1R3F-204ENST00000471261 TRPM1Q7Z4N2 1603 aa18■□□□□ 0.47
PPP1R3F-204ENST00000471261 USP32Q8NFA0 1604 aa18■□□□□ 0.47
PPP1R3F-204ENST00000471261 SOCS7O14512 581 aa17.99■□□□□ 0.47
PPP1R3F-204ENST00000471261 PLEKHG5O94827 1062 aa17.99■□□□□ 0.47
PPP1R3F-204ENST00000471261 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
PPP1R3F-204ENST00000471261 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
PPP1R3F-204ENST00000471261 SRPK2P78362 688 aaKnown RBP17.98■□□□□ 0.47
PPP1R3F-204ENST00000471261 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
PPP1R3F-204ENST00000471261 GPRASP1Q5JY77 1395 aa17.97■□□□□ 0.47
PPP1R3F-204ENST00000471261 CARD11Q9BXL7 1154 aa17.97■□□□□ 0.47
PPP1R3F-204ENST00000471261 AFF2P51816 1311 aa17.97■□□□□ 0.47
PPP1R3F-204ENST00000471261 NGLY1Q96IV0 654 aa17.96■□□□□ 0.47
PPP1R3F-204ENST00000471261 ATP7BP35670 1465 aa17.95■□□□□ 0.46
PPP1R3F-204ENST00000471261 HAP1P54257 671 aaPredicted RBP17.95■□□□□ 0.46
PPP1R3F-204ENST00000471261 CABP2Q9NPB3 220 aa17.95■□□□□ 0.46
PPP1R3F-204ENST00000471261 TNS3Q68CZ2 1445 aa17.95■□□□□ 0.46
PPP1R3F-204ENST00000471261 SBNO1A3KN83 1393 aa17.94■□□□□ 0.46
PPP1R3F-204ENST00000471261 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
PPP1R3F-204ENST00000471261 CCDC61Q9Y6R9 512 aa17.94■□□□□ 0.46
PPP1R3F-204ENST00000471261 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
PPP1R3F-204ENST00000471261 COL22A1Q8NFW1 1626 aaPredicted RBP17.93■□□□□ 0.46
PPP1R3F-204ENST00000471261 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
PPP1R3F-204ENST00000471261 RALGAPBQ86X10 1494 aa17.92■□□□□ 0.46
PPP1R3F-204ENST00000471261 EVC2Q86UK5 1308 aa17.92■□□□□ 0.46
PPP1R3F-204ENST00000471261 CABLES1Q8TDN4 633 aa17.91■□□□□ 0.46
PPP1R3F-204ENST00000471261 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
PPP1R3F-204ENST00000471261 ITSN1Q15811 1721 aa17.89■□□□□ 0.46
PPP1R3F-204ENST00000471261 QTRT2Q9H974 415 aaKnown RBP17.89■□□□□ 0.45
PPP1R3F-204ENST00000471261 USP21Q9UK80 565 aa17.89■□□□□ 0.45
PPP1R3F-204ENST00000471261 ACEP12821 1306 aa17.89■□□□□ 0.45
PPP1R3F-204ENST00000471261 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
PPP1R3F-204ENST00000471261 PLEKHG3A1L390 1219 aa17.88■□□□□ 0.45
PPP1R3F-204ENST00000471261 RXRBP28702 533 aa17.88■□□□□ 0.45
PPP1R3F-204ENST00000471261 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
PPP1R3F-204ENST00000471261 FNBP4Q8N3X1 1017 aaPredicted RBP17.86■□□□□ 0.45
PPP1R3F-204ENST00000471261 CABP1Q9NZU7 370 aa17.86■□□□□ 0.45
PPP1R3F-204ENST00000471261 POLR3AO14802 1390 aaPredicted RBP17.86■□□□□ 0.45
PPP1R3F-204ENST00000471261 TOPAZ1Q8N9V7 1692 aa17.85■□□□□ 0.45
PPP1R3F-204ENST00000471261 TRPM3Q9HCF6 1732 aaPredicted RBP17.84■□□□□ 0.45
PPP1R3F-204ENST00000471261 NUTM2GQ5VZR2 741 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms