RNA–Protein interactions for RNA: ENST00000471202.5

CHTF18-208, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 4,494 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-208ENST00000471202 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
CHTF18-208ENST00000471202 C9orf78Q9NZ63 289 aaPredicted RBP17.81■□□□□ 0.44
CHTF18-208ENST00000471202 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
CHTF18-208ENST00000471202 FRAT2O75474 233 aaPredicted RBP17.81■□□□□ 0.44
CHTF18-208ENST00000471202 PHF14O94880 888 aa17.81■□□□□ 0.44
CHTF18-208ENST00000471202 INTS3Q68E01 1043 aaKnown RBP17.81■□□□□ 0.44
CHTF18-208ENST00000471202 DIAPH3Q9NSV4 1193 aa17.81■□□□□ 0.44
CHTF18-208ENST00000471202 CCDC141Q6ZP82 1450 aa17.81■□□□□ 0.44
CHTF18-208ENST00000471202 SLFN5Q08AF3 891 aa17.8■□□□□ 0.44
CHTF18-208ENST00000471202 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
CHTF18-208ENST00000471202 CCDC9Q9Y3X0 531 aaKnown RBP17.79■□□□□ 0.44
CHTF18-208ENST00000471202 CABP1Q9NZU7 370 aa17.79■□□□□ 0.44
CHTF18-208ENST00000471202 NOB1Q9ULX3 412 aaKnown RBP17.79■□□□□ 0.44
CHTF18-208ENST00000471202 MSH5O43196 834 aa17.78■□□□□ 0.44
CHTF18-208ENST00000471202 WWC1Q8IX03 1113 aa17.78■□□□□ 0.44
CHTF18-208ENST00000471202 TULP1O00294 542 aaPredicted RBP17.77■□□□□ 0.44
CHTF18-208ENST00000471202 CDC45O75419 566 aa17.77■□□□□ 0.44
CHTF18-208ENST00000471202 TWISTNBQ3B726 338 aaPredicted RBP17.77■□□□□ 0.44
CHTF18-208ENST00000471202 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.44
CHTF18-208ENST00000471202 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
CHTF18-208ENST00000471202 SKAP1Q86WV1 359 aa17.76■□□□□ 0.43
CHTF18-208ENST00000471202 ATP6V1DQ9Y5K8 247 aa17.76■□□□□ 0.43
CHTF18-208ENST00000471202 RAPGEF3O95398 923 aa17.76■□□□□ 0.43
CHTF18-208ENST00000471202 NEXNQ0ZGT2 675 aa17.76■□□□□ 0.43
CHTF18-208ENST00000471202 NUTM2GQ5VZR2 741 aa17.75■□□□□ 0.43
CHTF18-208ENST00000471202 ATF7IPQ6VMQ6 1270 aa17.75■□□□□ 0.43
CHTF18-208ENST00000471202 RUFY2Q8WXA3 655 aa17.75■□□□□ 0.43
CHTF18-208ENST00000471202 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
CHTF18-208ENST00000471202 CDK19Q9BWU1 502 aa17.75■□□□□ 0.43
CHTF18-208ENST00000471202 NLRP6P59044 892 aa17.75■□□□□ 0.43
CHTF18-208ENST00000471202 NUCB2P80303 420 aa17.75■□□□□ 0.43
CHTF18-208ENST00000471202 GRIN2AQ12879 1464 aa17.74■□□□□ 0.43
CHTF18-208ENST00000471202 PSME1Q06323 249 aa17.74■□□□□ 0.43
CHTF18-208ENST00000471202 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
CHTF18-208ENST00000471202 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
CHTF18-208ENST00000471202 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
CHTF18-208ENST00000471202 TXNDC2Q86VQ3 553 aa17.74■□□□□ 0.43
CHTF18-208ENST00000471202 KIF3AQ9Y496 699 aa17.74■□□□□ 0.43
CHTF18-208ENST00000471202 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
CHTF18-208ENST00000471202 CT47B1P0C2W7 299 aaPredicted RBP17.72■□□□□ 0.43
CHTF18-208ENST00000471202 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
CHTF18-208ENST00000471202 MCTP1Q6DN14 999 aa17.72■□□□□ 0.43
CHTF18-208ENST00000471202 NINLQ9Y2I6 1382 aa17.71■□□□□ 0.43
CHTF18-208ENST00000471202 H3BQV1 296 aa17.71■□□□□ 0.43
CHTF18-208ENST00000471202 IFFO2Q5TF58 517 aa17.71■□□□□ 0.43
CHTF18-208ENST00000471202 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
CHTF18-208ENST00000471202 FAM184AQ8NB25 1140 aa17.7■□□□□ 0.42
CHTF18-208ENST00000471202 ANO8Q9HCE9 1232 aaPredicted RBP17.7■□□□□ 0.42
CHTF18-208ENST00000471202 SULT6B1Q6IMI4 303 aa17.7■□□□□ 0.42
CHTF18-208ENST00000471202 TRAK2O60296 914 aa17.7■□□□□ 0.42
CHTF18-208ENST00000471202 TTC5Q8N0Z6 440 aa17.7■□□□□ 0.42
CHTF18-208ENST00000471202 GCC1Q96CN9 775 aa17.7■□□□□ 0.42
CHTF18-208ENST00000471202 RPGRIP1LQ68CZ1 1315 aa17.7■□□□□ 0.42
CHTF18-208ENST00000471202 UBTFL1P0CB47 393 aaPredicted RBP17.7■□□□□ 0.42
CHTF18-208ENST00000471202 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
CHTF18-208ENST00000471202 TOMM22Q9NS69 142 aa17.69■□□□□ 0.42
CHTF18-208ENST00000471202 DDX58O95786 925 aaKnown RBP17.69■□□□□ 0.42
CHTF18-208ENST00000471202 BRPF3Q9ULD4 1205 aa17.68■□□□□ 0.42
CHTF18-208ENST00000471202 G3BP1Q13283 466 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHTF18-208ENST00000471202 ISY1Q9ULR0 285 aaKnown RBP17.68■□□□□ 0.42
CHTF18-208ENST00000471202 TMPOP42166 694 aaKnown RBP17.68■□□□□ 0.42
CHTF18-208ENST00000471202 TPM4P67936 248 aa17.67■□□□□ 0.42
CHTF18-208ENST00000471202 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
CHTF18-208ENST00000471202 GNAI3P08754 354 aa17.67■□□□□ 0.42
CHTF18-208ENST00000471202 ADGRF5Q8IZF2 1346 aa17.66■□□□□ 0.42
CHTF18-208ENST00000471202 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
CHTF18-208ENST00000471202 MRE11P49959 708 aa17.66■□□□□ 0.42
CHTF18-208ENST00000471202 DUSP27Q5VZP5 1158 aa17.66■□□□□ 0.42
CHTF18-208ENST00000471202 VPS37CA5D8V6 355 aaPredicted RBP17.65■□□□□ 0.42
CHTF18-208ENST00000471202 GAS2L2Q8NHY3 880 aa17.65■□□□□ 0.42
CHTF18-208ENST00000471202 GPATCH8Q9UKJ3 1502 aaKnown RBP17.65■□□□□ 0.42
CHTF18-208ENST00000471202 ATAD2Q6PL18 1390 aa17.65■□□□□ 0.42
CHTF18-208ENST00000471202 SURF6O75683 361 aaKnown RBP17.65■□□□□ 0.42
CHTF18-208ENST00000471202 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
CHTF18-208ENST00000471202 SMC3Q9UQE7 1217 aa17.65■□□□□ 0.42
CHTF18-208ENST00000471202 RARSP54136 660 aaKnown RBP17.64■□□□□ 0.42
CHTF18-208ENST00000471202 KIF14Q15058 1648 aa17.64■□□□□ 0.42
CHTF18-208ENST00000471202 CCDC30Q5VVM6 783 aa17.64■□□□□ 0.41
CHTF18-208ENST00000471202 FCHSD2O94868 740 aa17.64■□□□□ 0.41
CHTF18-208ENST00000471202 NEK4P51957 841 aa17.64■□□□□ 0.41
CHTF18-208ENST00000471202 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
CHTF18-208ENST00000471202 ERC2O15083 957 aa17.64■□□□□ 0.41
CHTF18-208ENST00000471202 DISP3Q9P2K9 1392 aa17.64■□□□□ 0.41
CHTF18-208ENST00000471202 UGGT2Q9NYU1 1516 aa17.63■□□□□ 0.41
CHTF18-208ENST00000471202 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
CHTF18-208ENST00000471202 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
CHTF18-208ENST00000471202 ABTB2Q8N961 1025 aa17.63■□□□□ 0.41
CHTF18-208ENST00000471202 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
CHTF18-208ENST00000471202 CCDC34Q96HJ3 373 aa17.63■□□□□ 0.41
CHTF18-208ENST00000471202 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
CHTF18-208ENST00000471202 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
CHTF18-208ENST00000471202 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
CHTF18-208ENST00000471202 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
CHTF18-208ENST00000471202 RTEL1-TNFRSF6BF6WH68 1400 aa17.62■□□□□ 0.41
CHTF18-208ENST00000471202 BECN2A8MW95 431 aa17.62■□□□□ 0.41
CHTF18-208ENST00000471202 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
CHTF18-208ENST00000471202 GOLGA6L19H0YKK7 550 aa17.61■□□□□ 0.41
CHTF18-208ENST00000471202 RABEP1Q15276 862 aa17.61■□□□□ 0.41
CHTF18-208ENST00000471202 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
CHTF18-208ENST00000471202 CLASRPQ8N2M8 674 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms