RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
HDLBP-232ENST00000470482 PLEKHH1Q9ULM0 1364 aa17.37■□□□□ 0.37
HDLBP-232ENST00000470482 YTHDC2Q9H6S0 1430 aaKnown RBP17.37■□□□□ 0.37
HDLBP-232ENST00000470482 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
HDLBP-232ENST00000470482 LRRC59Q96AG4 307 aaKnown RBP17.36■□□□□ 0.37
HDLBP-232ENST00000470482 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
HDLBP-232ENST00000470482 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
HDLBP-232ENST00000470482 DHX57Q6P158 1386 aaKnown RBP17.34■□□□□ 0.37
HDLBP-232ENST00000470482 PNPLA6Q8IY17 1366 aa17.34■□□□□ 0.37
HDLBP-232ENST00000470482 STK26Q9P289 416 aa17.33■□□□□ 0.36
HDLBP-232ENST00000470482 ADGRB1O14514 1584 aa17.32■□□□□ 0.36
HDLBP-232ENST00000470482 STAC3Q96MF2 364 aa17.32■□□□□ 0.36
HDLBP-232ENST00000470482 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
HDLBP-232ENST00000470482 PXDNQ92626 1479 aa17.28■□□□□ 0.36
HDLBP-232ENST00000470482 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
HDLBP-232ENST00000470482 FMN2Q9NZ56 1722 aa17.24■□□□□ 0.35
HDLBP-232ENST00000470482 ESCO1Q5FWF5 840 aa17.24■□□□□ 0.35
HDLBP-232ENST00000470482 ZNF772Q68DY9 489 aaPredicted RBP17.24■□□□□ 0.35
HDLBP-232ENST00000470482 COL22A1Q8NFW1 1626 aaPredicted RBP17.24■□□□□ 0.35
HDLBP-232ENST00000470482 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
HDLBP-232ENST00000470482 FOXO3O43524 673 aa17.23■□□□□ 0.35
HDLBP-232ENST00000470482 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
HDLBP-232ENST00000470482 NUTM2BA6NNL0 878 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-232ENST00000470482 NUTM2EB1AL46 878 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-232ENST00000470482 NUTM2AQ8IVF1 878 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-232ENST00000470482 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
HDLBP-232ENST00000470482 AFF2P51816 1311 aa17.21■□□□□ 0.34
HDLBP-232ENST00000470482 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
HDLBP-232ENST00000470482 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
HDLBP-232ENST00000470482 MEX3CQ5U5Q3 659 aaKnown RBP17.19■□□□□ 0.34
HDLBP-232ENST00000470482 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
HDLBP-232ENST00000470482 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
HDLBP-232ENST00000470482 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-232ENST00000470482 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
HDLBP-232ENST00000470482 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
HDLBP-232ENST00000470482 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
HDLBP-232ENST00000470482 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
HDLBP-232ENST00000470482 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
HDLBP-232ENST00000470482 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
HDLBP-232ENST00000470482 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
HDLBP-232ENST00000470482 RXRBP28702 533 aa17.15■□□□□ 0.34
HDLBP-232ENST00000470482 KIF1AQ12756 1690 aa17.14■□□□□ 0.33
HDLBP-232ENST00000470482 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
HDLBP-232ENST00000470482 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
HDLBP-232ENST00000470482 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
HDLBP-232ENST00000470482 QTRT2Q9H974 415 aaKnown RBP17.14■□□□□ 0.33
HDLBP-232ENST00000470482 BCL9LQ86UU0 1499 aa17.13■□□□□ 0.33
HDLBP-232ENST00000470482 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
HDLBP-232ENST00000470482 POGKQ9P215 609 aa17.13■□□□□ 0.33
HDLBP-232ENST00000470482 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
HDLBP-232ENST00000470482 WASLO00401 505 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-232ENST00000470482 NBPF1Q3BBV0 1214 aa17.12■□□□□ 0.33
HDLBP-232ENST00000470482 KIAA1210Q9ULL0 1709 aa17.12■□□□□ 0.33
HDLBP-232ENST00000470482 RBM6P78332 1123 aaKnown RBP17.11■□□□□ 0.33
HDLBP-232ENST00000470482 NGLY1Q96IV0 654 aa17.11■□□□□ 0.33
HDLBP-232ENST00000470482 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
HDLBP-232ENST00000470482 ATRNO75882 1429 aa17.1■□□□□ 0.33
HDLBP-232ENST00000470482 ARHGEF28Q8N1W1 1705 aaKnown RBP17.1■□□□□ 0.33
HDLBP-232ENST00000470482 UPF1Q92900 1129 aaKnown RBP eCLIP17.09■□□□□ 0.33
HDLBP-232ENST00000470482 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
HDLBP-232ENST00000470482 TULP4Q9NRJ4 1543 aa17.09■□□□□ 0.33
HDLBP-232ENST00000470482 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.32
HDLBP-232ENST00000470482 L3MBTL2Q969R5 705 aa17.08■□□□□ 0.32
HDLBP-232ENST00000470482 SLIT2O94813 1529 aa17.07■□□□□ 0.32
HDLBP-232ENST00000470482 RGS12O14924 1447 aa17.07■□□□□ 0.32
HDLBP-232ENST00000470482 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
HDLBP-232ENST00000470482 USP21Q9UK80 565 aa17.07■□□□□ 0.32
HDLBP-232ENST00000470482 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
HDLBP-232ENST00000470482 PSME1Q06323 249 aa17.06■□□□□ 0.32
HDLBP-232ENST00000470482 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
HDLBP-232ENST00000470482 TRPM3Q9HCF6 1732 aaPredicted RBP17.06■□□□□ 0.32
HDLBP-232ENST00000470482 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
HDLBP-232ENST00000470482 ATP7BP35670 1465 aa17.05■□□□□ 0.32
HDLBP-232ENST00000470482 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
HDLBP-232ENST00000470482 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
HDLBP-232ENST00000470482 NUDT16Q96DE0 195 aaKnown RBP17.03■□□□□ 0.32
HDLBP-232ENST00000470482 ALS2Q96Q42 1657 aa17.02■□□□□ 0.32
HDLBP-232ENST00000470482 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
HDLBP-232ENST00000470482 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
HDLBP-232ENST00000470482 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
HDLBP-232ENST00000470482 ARHGEF10O15013 1369 aa17.02■□□□□ 0.31
HDLBP-232ENST00000470482 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
HDLBP-232ENST00000470482 FAM83GA6ND36 823 aa17■□□□□ 0.31
HDLBP-232ENST00000470482 GJD4Q96KN9 370 aaPredicted RBP17■□□□□ 0.31
HDLBP-232ENST00000470482 TNKS1BP1Q9C0C2 1729 aaKnown RBP17■□□□□ 0.31
HDLBP-232ENST00000470482 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
HDLBP-232ENST00000470482 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
HDLBP-232ENST00000470482 EP400Q96L91 3159 aa16.98■□□□□ 0.31
HDLBP-232ENST00000470482 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
HDLBP-232ENST00000470482 TOPAZ1Q8N9V7 1692 aa16.97■□□□□ 0.31
HDLBP-232ENST00000470482 NBPF8Q3BBV2 869 aa16.97■□□□□ 0.31
HDLBP-232ENST00000470482 GPRASP1Q5JY77 1395 aa16.97■□□□□ 0.31
HDLBP-232ENST00000470482 GLI3P10071 1580 aa16.97■□□□□ 0.31
HDLBP-232ENST00000470482 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.31
HDLBP-232ENST00000470482 CENPJQ9HC77 1338 aaPredicted RBP16.96■□□□□ 0.3
HDLBP-232ENST00000470482 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
HDLBP-232ENST00000470482 VPS72Q15906 364 aa16.95■□□□□ 0.3
HDLBP-232ENST00000470482 TRPM1Q7Z4N2 1603 aa16.95■□□□□ 0.3
HDLBP-232ENST00000470482 NGDNQ8NEJ9 315 aaKnown RBP16.94■□□□□ 0.3
HDLBP-232ENST00000470482 ACEP12821 1306 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms