RNA–Protein interactions for RNA: ENST00000470443.5

PABPC4-210, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 1,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-210ENST00000470443 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
PABPC4-210ENST00000470443 CLTCQ00610 1675 aaKnown RBP10.16□□□□□ -0.78
PABPC4-210ENST00000470443 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
PABPC4-210ENST00000470443 NPATQ14207 1427 aa10.16□□□□□ -0.78
PABPC4-210ENST00000470443 PTPRKQ15262 1439 aa10.16□□□□□ -0.78
PABPC4-210ENST00000470443 CNTLNQ9NXG0 1405 aa10.16□□□□□ -0.78
PABPC4-210ENST00000470443 MROH2AA6NES4 1674 aa10.15□□□□□ -0.78
PABPC4-210ENST00000470443 HSPA1LP34931 641 aa10.15□□□□□ -0.78
PABPC4-210ENST00000470443 TCOF1Q13428 1488 aaKnown RBP10.15□□□□□ -0.78
PABPC4-210ENST00000470443 SYCP2Q9BX26 1530 aa10.14□□□□□ -0.79
PABPC4-210ENST00000470443 HRO43593 1189 aa10.14□□□□□ -0.79
PABPC4-210ENST00000470443 GGT6Q6P531 493 aa10.14□□□□□ -0.79
PABPC4-210ENST00000470443 MYO3AQ8NEV4 1616 aa10.14□□□□□ -0.79
PABPC4-210ENST00000470443 GPATCH8Q9UKJ3 1502 aaKnown RBP10.13□□□□□ -0.79
PABPC4-210ENST00000470443 SPAG9O60271 1321 aaKnown RBP10.13□□□□□ -0.79
PABPC4-210ENST00000470443 PIP4K2BP78356 416 aa10.13□□□□□ -0.79
PABPC4-210ENST00000470443 MFSD10Q14728 455 aa10.13□□□□□ -0.79
PABPC4-210ENST00000470443 DDX27Q96GQ7 796 aaKnown RBP10.13□□□□□ -0.79
PABPC4-210ENST00000470443 CASKIN1Q8WXD9 1431 aa10.13□□□□□ -0.79
PABPC4-210ENST00000470443 CEP170BQ9Y4F5 1589 aaPredicted RBP10.13□□□□□ -0.79
PABPC4-210ENST00000470443 ZNF142P52746 1687 aaPredicted RBP10.12□□□□□ -0.79
PABPC4-210ENST00000470443 KCNK17Q96T54 332 aa10.12□□□□□ -0.79
PABPC4-210ENST00000470443 LARP6Q9BRS8 491 aaKnown RBP10.12□□□□□ -0.79
PABPC4-210ENST00000470443 HCSTQ9UBK5 93 aa10.12□□□□□ -0.79
PABPC4-210ENST00000470443 PLXNC1O60486 1568 aa10.12□□□□□ -0.79
PABPC4-210ENST00000470443 PLA2R1Q13018 1463 aa10.11□□□□□ -0.79
PABPC4-210ENST00000470443 ZNF644Q9H582 1327 aaPredicted RBP10.11□□□□□ -0.79
PABPC4-210ENST00000470443 MED1Q15648 1581 aaPredicted RBP10.11□□□□□ -0.79
PABPC4-210ENST00000470443 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
PABPC4-210ENST00000470443 ZNF454Q8N9F8 522 aa10.11□□□□□ -0.79
PABPC4-210ENST00000470443 BCL2L12Q9HB09 334 aa10.11□□□□□ -0.79
PABPC4-210ENST00000470443 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
PABPC4-210ENST00000470443 ALKQ9UM73 1620 aa10.11□□□□□ -0.79
PABPC4-210ENST00000470443 A2MP01023 1474 aa10.1□□□□□ -0.79
PABPC4-210ENST00000470443 FOSBP53539 338 aa10.1□□□□□ -0.79
PABPC4-210ENST00000470443 ATP7AQ04656 1500 aa10.1□□□□□ -0.79
PABPC4-210ENST00000470443 DNMT1P26358 1616 aaKnown RBP10.1□□□□□ -0.79
PABPC4-210ENST00000470443 INO80Q9ULG1 1556 aaPredicted RBP10.09□□□□□ -0.79
PABPC4-210ENST00000470443 NEURL4Q96JN8 1562 aa10.09□□□□□ -0.79
PABPC4-210ENST00000470443 SLC4A5Q9BY07 1137 aa10.08□□□□□ -0.8
PABPC4-210ENST00000470443 CCDC18Q5T9S5 1454 aa10.08□□□□□ -0.8
PABPC4-210ENST00000470443 A2ML1A8K2U0 1454 aa10.07□□□□□ -0.8
PABPC4-210ENST00000470443 EVI5O60447 810 aa10.07□□□□□ -0.8
PABPC4-210ENST00000470443 VPS9D1Q9Y2B5 631 aa10.07□□□□□ -0.8
PABPC4-210ENST00000470443 SHANK2Q9UPX8 1470 aa10.06□□□□□ -0.8
PABPC4-210ENST00000470443 CFDP1Q9UEE9 299 aaPredicted RBP10.06□□□□□ -0.8
PABPC4-210ENST00000470443 KIAA1107Q9UPP5 1409 aa10.06□□□□□ -0.8
PABPC4-210ENST00000470443 VWDEQ8N2E2 1590 aa10.05□□□□□ -0.8
PABPC4-210ENST00000470443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.05□□□□□ -0.8
PABPC4-210ENST00000470443 MBD5Q9P267 1494 aa10.04□□□□□ -0.8
PABPC4-210ENST00000470443 TOM1O60784 492 aa10.04□□□□□ -0.8
PABPC4-210ENST00000470443 PTPREP23469 700 aa10.04□□□□□ -0.8
PABPC4-210ENST00000470443 STAC3Q96MF2 364 aa10.04□□□□□ -0.8
PABPC4-210ENST00000470443 FYCO1Q9BQS8 1478 aa10.04□□□□□ -0.8
PABPC4-210ENST00000470443 STRCP1A6NGW2 1772 aa10.03□□□□□ -0.8
PABPC4-210ENST00000470443 POLR1AO95602 1720 aaPredicted RBP10.03□□□□□ -0.8
PABPC4-210ENST00000470443 MAP3K9P80192 1104 aa10.03□□□□□ -0.8
PABPC4-210ENST00000470443 CADPS2Q86UW7 1296 aa10.03□□□□□ -0.8
PABPC4-210ENST00000470443 ZDHHC16Q969W1 377 aa10.03□□□□□ -0.8
PABPC4-210ENST00000470443 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
PABPC4-210ENST00000470443 RGS17Q9UGC6 210 aaPredicted RBP10.03□□□□□ -0.8
PABPC4-210ENST00000470443 CCNB3Q8WWL7 1395 aa10.02□□□□□ -0.8
PABPC4-210ENST00000470443 TNRQ92752 1358 aa10.02□□□□□ -0.8
PABPC4-210ENST00000470443 ADGBQ8N7X0 1667 aa10.02□□□□□ -0.81
PABPC4-210ENST00000470443 CPS1P31327 1500 aa10.02□□□□□ -0.81
PABPC4-210ENST00000470443 DHX29Q7Z478 1369 aaKnown RBP10.01□□□□□ -0.81
PABPC4-210ENST00000470443 KIF3BO15066 747 aa10.01□□□□□ -0.81
PABPC4-210ENST00000470443 KCTD12Q96CX2 325 aaKnown RBP10.01□□□□□ -0.81
PABPC4-210ENST00000470443 PLA2G2EQ9NZK7 142 aa10.01□□□□□ -0.81
PABPC4-210ENST00000470443 TIAM1Q13009 1591 aa10.01□□□□□ -0.81
PABPC4-210ENST00000470443 PLEKHH2Q8IVE3 1493 aa10□□□□□ -0.81
PABPC4-210ENST00000470443 ANKLE2Q86XL3 938 aa10□□□□□ -0.81
PABPC4-210ENST00000470443 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
PABPC4-210ENST00000470443 ADAM33Q9BZ11 813 aa10□□□□□ -0.81
PABPC4-210ENST00000470443 PZPP20742 1482 aa9.99□□□□□ -0.81
PABPC4-210ENST00000470443 NPHP4O75161 1426 aaPredicted RBP9.99□□□□□ -0.81
PABPC4-210ENST00000470443 MIA2Q96PC5 1412 aa9.99□□□□□ -0.81
PABPC4-210ENST00000470443 MED14O60244 1454 aa9.98□□□□□ -0.81
PABPC4-210ENST00000470443 LRRC7Q96NW7 1537 aa9.98□□□□□ -0.81
PABPC4-210ENST00000470443 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
PABPC4-210ENST00000470443 RTEL1-TNFRSF6BF6WH68 1400 aa9.98□□□□□ -0.81
PABPC4-210ENST00000470443 CAMK2BQ13554 666 aa9.97□□□□□ -0.81
PABPC4-210ENST00000470443 THEMISQ8N1K5 641 aaPredicted RBP9.97□□□□□ -0.81
PABPC4-210ENST00000470443 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
PABPC4-210ENST00000470443 WASHC2CQ9Y4E1 1318 aa9.97□□□□□ -0.81
PABPC4-210ENST00000470443 MTUS2Q5JR59 1369 aa9.97□□□□□ -0.81
PABPC4-210ENST00000470443 UGGT1Q9NYU2 1555 aa9.97□□□□□ -0.81
PABPC4-210ENST00000470443 KDM5DQ9BY66 1539 aa9.96□□□□□ -0.82
PABPC4-210ENST00000470443 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
PABPC4-210ENST00000470443 DEPDC5O75140 1603 aa9.95□□□□□ -0.82
PABPC4-210ENST00000470443 IQGAP1P46940 1657 aa9.94□□□□□ -0.82
PABPC4-210ENST00000470443 PPP1R3GB7ZBB8 358 aa9.94□□□□□ -0.82
PABPC4-210ENST00000470443 LTKP29376 864 aa9.94□□□□□ -0.82
PABPC4-210ENST00000470443 POTEAQ6S8J7 498 aa9.94□□□□□ -0.82
PABPC4-210ENST00000470443 FBXW7Q969H0 707 aa9.94□□□□□ -0.82
PABPC4-210ENST00000470443 XIRP1Q702N8 1843 aaKnown RBP9.93□□□□□ -0.82
PABPC4-210ENST00000470443 ZC3H13Q5T200 1668 aaKnown RBP9.93□□□□□ -0.82
PABPC4-210ENST00000470443 NLRP1Q9C000 1473 aa9.93□□□□□ -0.82
PABPC4-210ENST00000470443 PHF14O94880 888 aa9.93□□□□□ -0.82
PABPC4-210ENST00000470443 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms