RNA–Protein interactions for RNA: ENST00000470432.5

ECM1-204, Transcript of extracellular matrix protein 1, humanhuman

TSL 2

Gene ECM1, Length 3,066 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-204ENST00000470432 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
ECM1-204ENST00000470432 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.53■□□□□ 0.08
ECM1-204ENST00000470432 FAM43AQ8N2R8 423 aa15.52■□□□□ 0.08
ECM1-204ENST00000470432 MYOM2P54296 1465 aa15.52■□□□□ 0.07
ECM1-204ENST00000470432 ZFYVE16Q7Z3T8 1539 aa15.52■□□□□ 0.07
ECM1-204ENST00000470432 CFAP70Q5T0N1 1121 aa15.51■□□□□ 0.07
ECM1-204ENST00000470432 KANK1Q14678 1352 aa15.51■□□□□ 0.07
ECM1-204ENST00000470432 ADGRL1O94910 1474 aa15.5■□□□□ 0.07
ECM1-204ENST00000470432 VWDEQ8N2E2 1590 aa15.5■□□□□ 0.07
ECM1-204ENST00000470432 FRMPD1Q5SYB0 1578 aa15.5■□□□□ 0.07
ECM1-204ENST00000470432 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
ECM1-204ENST00000470432 ABCA6Q8N139 1617 aa15.5■□□□□ 0.07
ECM1-204ENST00000470432 SBNO2Q9Y2G9 1366 aa15.49■□□□□ 0.07
ECM1-204ENST00000470432 UPF2Q9HAU5 1272 aaKnown RBP15.49■□□□□ 0.07
ECM1-204ENST00000470432 ZNF518AQ6AHZ1 1483 aa15.49■□□□□ 0.07
ECM1-204ENST00000470432 MYO3AQ8NEV4 1616 aa15.49■□□□□ 0.07
ECM1-204ENST00000470432 POGZQ7Z3K3 1410 aa15.49■□□□□ 0.07
ECM1-204ENST00000470432 SHPRHQ149N8 1683 aa15.49■□□□□ 0.07
ECM1-204ENST00000470432 RUNDC1Q96C34 613 aa15.49■□□□□ 0.07
ECM1-204ENST00000470432 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
ECM1-204ENST00000470432 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
ECM1-204ENST00000470432 ANTXR1Q9H6X2 564 aa15.48■□□□□ 0.07
ECM1-204ENST00000470432 WDR63Q8IWG1 891 aa15.48■□□□□ 0.07
ECM1-204ENST00000470432 POGKQ9P215 609 aa15.47■□□□□ 0.07
ECM1-204ENST00000470432 TBC1D32Q96NH3 1257 aa15.47■□□□□ 0.07
ECM1-204ENST00000470432 PCDHB15Q9Y5E8 787 aa15.47■□□□□ 0.07
ECM1-204ENST00000470432 ADGRF5Q8IZF2 1346 aa15.46■□□□□ 0.07
ECM1-204ENST00000470432 IQSEC2Q5JU85 1478 aa15.46■□□□□ 0.07
ECM1-204ENST00000470432 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
ECM1-204ENST00000470432 KIF1BO60333 1816 aa15.46■□□□□ 0.06
ECM1-204ENST00000470432 REREQ9P2R6 1566 aa15.46■□□□□ 0.06
ECM1-204ENST00000470432 MORC1Q86VD1 984 aa15.45■□□□□ 0.06
ECM1-204ENST00000470432 IFT172Q9UG01 1749 aa15.45■□□□□ 0.06
ECM1-204ENST00000470432 CCDC27Q2M243 656 aa15.45■□□□□ 0.06
ECM1-204ENST00000470432 TCP11L2Q8N4U5 519 aa15.45■□□□□ 0.06
ECM1-204ENST00000470432 RWDD1Q9H446 243 aaPredicted RBP15.45■□□□□ 0.06
ECM1-204ENST00000470432 ARHGEF40Q8TER5 1519 aa15.45■□□□□ 0.06
ECM1-204ENST00000470432 L1TD1Q5T7N2 865 aaKnown RBP15.45■□□□□ 0.06
ECM1-204ENST00000470432 PDZRN3Q9UPQ7 1066 aa15.45■□□□□ 0.06
ECM1-204ENST00000470432 NRXN1Q9ULB1 1477 aa15.44■□□□□ 0.06
ECM1-204ENST00000470432 RLBP1P12271 317 aa15.44■□□□□ 0.06
ECM1-204ENST00000470432 MLH3Q9UHC1 1453 aa15.44■□□□□ 0.06
ECM1-204ENST00000470432 HECW2Q9P2P5 1572 aa15.44■□□□□ 0.06
ECM1-204ENST00000470432 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
ECM1-204ENST00000470432 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
ECM1-204ENST00000470432 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
ECM1-204ENST00000470432 NSD3Q9BZ95 1437 aa15.43■□□□□ 0.06
ECM1-204ENST00000470432 TBC1D2Q9BYX2 928 aa15.43■□□□□ 0.06
ECM1-204ENST00000470432 RRP7AQ9Y3A4 280 aaKnown RBP15.42■□□□□ 0.06
ECM1-204ENST00000470432 ATP7AQ04656 1500 aa15.42■□□□□ 0.06
ECM1-204ENST00000470432 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
ECM1-204ENST00000470432 UGGT1Q9NYU2 1555 aa15.42■□□□□ 0.06
ECM1-204ENST00000470432 SETBP1Q9Y6X0 1596 aa15.42■□□□□ 0.06
ECM1-204ENST00000470432 KIF3BO15066 747 aa15.41■□□□□ 0.06
ECM1-204ENST00000470432 TNNQ9UQP3 1299 aa15.4■□□□□ 0.06
ECM1-204ENST00000470432 MYH16Q9H6N6 1097 aa15.4■□□□□ 0.06
ECM1-204ENST00000470432 USP32Q8NFA0 1604 aa15.4■□□□□ 0.06
ECM1-204ENST00000470432 MROH1Q8NDA8 1641 aa15.39■□□□□ 0.05
ECM1-204ENST00000470432 TNNT2P45379 298 aaPredicted RBP15.39■□□□□ 0.05
ECM1-204ENST00000470432 MVPQ14764 893 aaKnown RBP15.39■□□□□ 0.05
ECM1-204ENST00000470432 MROH2AA6NES4 1674 aa15.38■□□□□ 0.05
ECM1-204ENST00000470432 CFAP53Q96M91 514 aa15.38■□□□□ 0.05
ECM1-204ENST00000470432 EFCAB6Q5THR3 1501 aa15.38■□□□□ 0.05
ECM1-204ENST00000470432 ZC3H13Q5T200 1668 aaKnown RBP15.38■□□□□ 0.05
ECM1-204ENST00000470432 BCL2L13Q9BXK5 485 aa15.38■□□□□ 0.05
ECM1-204ENST00000470432 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
ECM1-204ENST00000470432 MTHFSP49914 203 aa15.37■□□□□ 0.05
ECM1-204ENST00000470432 CT47B1P0C2W7 299 aaPredicted RBP15.37■□□□□ 0.05
ECM1-204ENST00000470432 EIF5BO60841 1220 aaKnown RBP15.36■□□□□ 0.05
ECM1-204ENST00000470432 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
ECM1-204ENST00000470432 QRICH2Q9H0J4 1663 aa15.36■□□□□ 0.05
ECM1-204ENST00000470432 KIDINS220Q9ULH0 1771 aa15.35■□□□□ 0.05
ECM1-204ENST00000470432 NOS1P29475 1434 aa15.35■□□□□ 0.05
ECM1-204ENST00000470432 MCM4P33991 863 aa15.35■□□□□ 0.05
ECM1-204ENST00000470432 DZIP1LQ8IYY4 767 aaKnown RBP15.35■□□□□ 0.05
ECM1-204ENST00000470432 ADGRB3O60242 1522 aa15.34■□□□□ 0.05
ECM1-204ENST00000470432 AGLP35573 1532 aa15.34■□□□□ 0.05
ECM1-204ENST00000470432 FTSJ3Q8IY81 847 aaKnown RBP15.34■□□□□ 0.05
ECM1-204ENST00000470432 C22orf23Q9BZE7 217 aa15.34■□□□□ 0.05
ECM1-204ENST00000470432 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
ECM1-204ENST00000470432 TRAK1Q9UPV9 953 aa15.34■□□□□ 0.05
ECM1-204ENST00000470432 FSD2A1L4K1 749 aa15.34■□□□□ 0.05
ECM1-204ENST00000470432 DIP2CQ9Y2E4 1556 aa15.34■□□□□ 0.05
ECM1-204ENST00000470432 ADGRB2O60241 1585 aa15.33■□□□□ 0.04
ECM1-204ENST00000470432 LMTK2Q8IWU2 1503 aa15.33■□□□□ 0.04
ECM1-204ENST00000470432 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.04
ECM1-204ENST00000470432 HDAC1Q13547 482 aaPredicted RBP15.33■□□□□ 0.04
ECM1-204ENST00000470432 CHMP5Q9NZZ3 219 aa15.33■□□□□ 0.04
ECM1-204ENST00000470432 PUS7Q96PZ0 661 aaKnown RBP15.32■□□□□ 0.04
ECM1-204ENST00000470432 NSD2O96028 1365 aa15.32■□□□□ 0.04
ECM1-204ENST00000470432 RRAGDQ9NQL2 400 aaPredicted RBP15.32■□□□□ 0.04
ECM1-204ENST00000470432 ADGRB1O14514 1584 aa15.32■□□□□ 0.04
ECM1-204ENST00000470432 XRCC6P12956 609 aaKnown RBP eCLIP15.32■□□□□ 0.04
ECM1-204ENST00000470432 PPLO60437 1756 aa15.31■□□□□ 0.04
ECM1-204ENST00000470432 U2AF1L5P0DN76 240 aaPredicted RBP15.31■□□□□ 0.04
ECM1-204ENST00000470432 U2AF1Q01081 240 aaKnown RBP eCLIP15.31■□□□□ 0.04
ECM1-204ENST00000470432 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
ECM1-204ENST00000470432 DDX19BQ9UMR2 479 aa15.3■□□□□ 0.04
ECM1-204ENST00000470432 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
ECM1-204ENST00000470432 MFAP1P55081 439 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms