RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 POLR3AO14802 1390 aaPredicted RBP26.37■■□□□ 1.81
CDHR3-207ENST00000470188 APAF1O14727 1248 aa26.36■■□□□ 1.81
CDHR3-207ENST00000470188 MORC1Q86VD1 984 aa26.36■■□□□ 1.81
CDHR3-207ENST00000470188 ARHGEF28Q8N1W1 1705 aaKnown RBP26.36■■□□□ 1.81
CDHR3-207ENST00000470188 ZFYVE9O95405 1425 aa26.36■■□□□ 1.81
CDHR3-207ENST00000470188 CRBNQ96SW2 442 aa26.36■■□□□ 1.81
CDHR3-207ENST00000470188 EVC2Q86UK5 1308 aa26.35■■□□□ 1.81
CDHR3-207ENST00000470188 SLFN5Q08AF3 891 aa26.35■■□□□ 1.81
CDHR3-207ENST00000470188 PUS7Q96PZ0 661 aaKnown RBP26.35■■□□□ 1.81
CDHR3-207ENST00000470188 PREX1Q8TCU6 1659 aa26.33■■□□□ 1.81
CDHR3-207ENST00000470188 TULP4Q9NRJ4 1543 aa26.33■■□□□ 1.81
CDHR3-207ENST00000470188 USP32Q8NFA0 1604 aa26.32■■□□□ 1.8
CDHR3-207ENST00000470188 NGEFQ8N5V2 710 aa26.31■■□□□ 1.8
CDHR3-207ENST00000470188 TRMT2AQ8IZ69 625 aaKnown RBP26.3■■□□□ 1.8
CDHR3-207ENST00000470188 CGNL1Q0VF96 1302 aa26.3■■□□□ 1.8
CDHR3-207ENST00000470188 TMEM131LA2VDJ0 1609 aa26.3■■□□□ 1.8
CDHR3-207ENST00000470188 TNNT2P45379 298 aaPredicted RBP26.29■■□□□ 1.8
CDHR3-207ENST00000470188 C20orf194Q5TEA3 1177 aa26.28■■□□□ 1.8
CDHR3-207ENST00000470188 ANKRD36BQ8N2N9 1353 aa26.27■■□□□ 1.8
CDHR3-207ENST00000470188 MYO5BQ9ULV0 1848 aa26.27■■□□□ 1.8
CDHR3-207ENST00000470188 TCERG1O14776 1098 aaKnown RBP26.27■■□□□ 1.8
CDHR3-207ENST00000470188 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.26■■□□□ 1.79
CDHR3-207ENST00000470188 E9PSI1 815 aa26.26■■□□□ 1.79
CDHR3-207ENST00000470188 NKTRP30414 1462 aaKnown RBP26.25■■□□□ 1.79
CDHR3-207ENST00000470188 SPINK5Q9NQ38 1064 aaPredicted RBP26.25■■□□□ 1.79
CDHR3-207ENST00000470188 SAFB2Q14151 953 aaKnown RBP eCLIP26.24■■□□□ 1.79
CDHR3-207ENST00000470188 CABP2Q9NPB3 220 aa26.24■■□□□ 1.79
CDHR3-207ENST00000470188 STK26Q9P289 416 aa26.24■■□□□ 1.79
CDHR3-207ENST00000470188 SHPRHQ149N8 1683 aa26.24■■□□□ 1.79
CDHR3-207ENST00000470188 FBXO31Q5XUX0 539 aaPredicted RBP26.23■■□□□ 1.79
CDHR3-207ENST00000470188 NSD2O96028 1365 aa26.23■■□□□ 1.79
CDHR3-207ENST00000470188 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
CDHR3-207ENST00000470188 MTHFSP49914 203 aa26.19■■□□□ 1.78
CDHR3-207ENST00000470188 CFAP53Q96M91 514 aa26.19■■□□□ 1.78
CDHR3-207ENST00000470188 NINLQ9Y2I6 1382 aa26.19■■□□□ 1.78
CDHR3-207ENST00000470188 MS4A1P11836 297 aa26.19■■□□□ 1.78
CDHR3-207ENST00000470188 USP35Q9P2H5 1018 aa26.19■■□□□ 1.78
CDHR3-207ENST00000470188 PTPRMP28827 1452 aa26.18■■□□□ 1.78
CDHR3-207ENST00000470188 REREQ9P2R6 1566 aa26.18■■□□□ 1.78
CDHR3-207ENST00000470188 DMRT2Q9Y5R5 561 aa26.18■■□□□ 1.78
CDHR3-207ENST00000470188 SRPK2P78362 688 aaKnown RBP26.17■■□□□ 1.78
CDHR3-207ENST00000470188 WWC1Q8IX03 1113 aa26.17■■□□□ 1.78
CDHR3-207ENST00000470188 RUNDC1Q96C34 613 aa26.17■■□□□ 1.78
CDHR3-207ENST00000470188 YTHDC2Q9H6S0 1430 aaKnown RBP26.17■■□□□ 1.78
CDHR3-207ENST00000470188 AGLP35573 1532 aa26.16■■□□□ 1.78
CDHR3-207ENST00000470188 TRHP20396 242 aaPredicted RBP26.16■■□□□ 1.78
CDHR3-207ENST00000470188 STAG3Q9UJ98 1225 aa26.16■■□□□ 1.78
CDHR3-207ENST00000470188 PPP6R1Q9UPN7 881 aa26.16■■□□□ 1.78
CDHR3-207ENST00000470188 PRAM1Q96QH2 718 aa26.14■■□□□ 1.78
CDHR3-207ENST00000470188 A0A1W2PP64 1363 aa26.14■■□□□ 1.78
CDHR3-207ENST00000470188 POGKQ9P215 609 aa26.13■■□□□ 1.77
CDHR3-207ENST00000470188 IQSEC2Q5JU85 1478 aa26.13■■□□□ 1.77
CDHR3-207ENST00000470188 ATAD2Q6PL18 1390 aa26.13■■□□□ 1.77
CDHR3-207ENST00000470188 ABCC11Q96J66 1382 aa26.12■■□□□ 1.77
CDHR3-207ENST00000470188 MINK1Q8N4C8 1332 aaPredicted RBP26.12■■□□□ 1.77
CDHR3-207ENST00000470188 ALKQ9UM73 1620 aa26.12■■□□□ 1.77
CDHR3-207ENST00000470188 KDM2BQ8NHM5 1336 aa26.12■■□□□ 1.77
CDHR3-207ENST00000470188 PDE4AP27815 886 aa26.12■■□□□ 1.77
CDHR3-207ENST00000470188 BCAR3O75815 825 aa26.11■■□□□ 1.77
CDHR3-207ENST00000470188 TCP11L2Q8N4U5 519 aa26.11■■□□□ 1.77
CDHR3-207ENST00000470188 BACH2Q9BYV9 841 aa26.1■■□□□ 1.77
CDHR3-207ENST00000470188 NEUROD2Q15784 382 aa26.1■■□□□ 1.77
CDHR3-207ENST00000470188 CENPQQ7L2Z9 268 aaPredicted RBP26.09■■□□□ 1.77
CDHR3-207ENST00000470188 RRP7AQ9Y3A4 280 aaKnown RBP26.09■■□□□ 1.77
CDHR3-207ENST00000470188 CLTCQ00610 1675 aaKnown RBP26.09■■□□□ 1.77
CDHR3-207ENST00000470188 TERF2IPQ9NYB0 399 aa26.07■■□□□ 1.76
CDHR3-207ENST00000470188 PPM1GO15355 546 aaPredicted RBP26.06■■□□□ 1.76
CDHR3-207ENST00000470188 PHF23Q9BUL5 403 aaPredicted RBP26.06■■□□□ 1.76
CDHR3-207ENST00000470188 SPATA31D1Q6ZQQ2 1576 aa26.05■■□□□ 1.76
CDHR3-207ENST00000470188 A2ML1A8K2U0 1454 aa26.05■■□□□ 1.76
CDHR3-207ENST00000470188 NPM2Q86SE8 214 aaKnown RBP26.05■■□□□ 1.76
CDHR3-207ENST00000470188 U2AF1L5P0DN76 240 aaPredicted RBP26.04■■□□□ 1.76
CDHR3-207ENST00000470188 U2AF1Q01081 240 aaKnown RBP eCLIP26.04■■□□□ 1.76
CDHR3-207ENST00000470188 SKAP1Q86WV1 359 aa26.04■■□□□ 1.76
CDHR3-207ENST00000470188 WDR63Q8IWG1 891 aa26.04■■□□□ 1.76
CDHR3-207ENST00000470188 GGNBP2Q9H3C7 697 aa26.04■■□□□ 1.76
CDHR3-207ENST00000470188 CD163L1Q9NR16 1453 aa26.03■■□□□ 1.76
CDHR3-207ENST00000470188 CCDC27Q2M243 656 aa26.03■■□□□ 1.76
CDHR3-207ENST00000470188 MLECQ14165 292 aa26.02■■□□□ 1.76
CDHR3-207ENST00000470188 CDK19Q9BWU1 502 aa26.02■■□□□ 1.76
CDHR3-207ENST00000470188 NEFMP07197 916 aa26.01■■□□□ 1.75
CDHR3-207ENST00000470188 ARHGEF40Q8TER5 1519 aa26.01■■□□□ 1.75
CDHR3-207ENST00000470188 RIMS2Q9UQ26 1411 aa26■■□□□ 1.75
CDHR3-207ENST00000470188 NCBP3Q53F19 620 aaKnown RBP26■■□□□ 1.75
CDHR3-207ENST00000470188 MED14O60244 1454 aa26■■□□□ 1.75
CDHR3-207ENST00000470188 PDE3AQ14432 1141 aa26■■□□□ 1.75
CDHR3-207ENST00000470188 HDGFL2Q7Z4V5 671 aaPredicted RBP26■■□□□ 1.75
CDHR3-207ENST00000470188 FYB1O15117 783 aa25.99■■□□□ 1.75
CDHR3-207ENST00000470188 DDRGK1Q96HY6 314 aa25.99■■□□□ 1.75
CDHR3-207ENST00000470188 CANXP27824 592 aaKnown RBP25.98■■□□□ 1.75
CDHR3-207ENST00000470188 DLC1Q96QB1 1528 aa25.98■■□□□ 1.75
CDHR3-207ENST00000470188 ANKRD26Q9UPS8 1709 aa25.98■■□□□ 1.75
CDHR3-207ENST00000470188 NLRP1Q9C000 1473 aa25.97■■□□□ 1.75
CDHR3-207ENST00000470188 ADGRB2O60241 1585 aa25.96■■□□□ 1.75
CDHR3-207ENST00000470188 CABP1Q9NZU7 370 aa25.95■■□□□ 1.74
CDHR3-207ENST00000470188 COL3A1P02461 1466 aaPredicted RBP25.95■■□□□ 1.74
CDHR3-207ENST00000470188 RARSP54136 660 aaKnown RBP25.94■■□□□ 1.74
CDHR3-207ENST00000470188 U2SURPO15042 1029 aaKnown RBP25.93■■□□□ 1.74
CDHR3-207ENST00000470188 LAS1LQ9Y4W2 734 aaKnown RBP25.93■■□□□ 1.74
CDHR3-207ENST00000470188 MYH16Q9H6N6 1097 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms