RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 PREX1Q8TCU6 1659 aa9.11□□□□□ -0.95
GAPVD1-215ENST00000470056 NSD3Q9BZ95 1437 aa9.11□□□□□ -0.95
GAPVD1-215ENST00000470056 TSPOAP1O95153 1857 aa9.11□□□□□ -0.95
GAPVD1-215ENST00000470056 PPLO60437 1756 aa9.11□□□□□ -0.95
GAPVD1-215ENST00000470056 PRAM1Q96QH2 718 aa9.11□□□□□ -0.95
GAPVD1-215ENST00000470056 MYO3AQ8NEV4 1616 aa9.11□□□□□ -0.95
GAPVD1-215ENST00000470056 SAFB2Q14151 953 aaKnown RBP eCLIP9.11□□□□□ -0.95
GAPVD1-215ENST00000470056 ADGRB1O14514 1584 aa9.1□□□□□ -0.95
GAPVD1-215ENST00000470056 IFT172Q9UG01 1749 aa9.1□□□□□ -0.95
GAPVD1-215ENST00000470056 MINK1Q8N4C8 1332 aaPredicted RBP9.1□□□□□ -0.95
GAPVD1-215ENST00000470056 NLRP1Q9C000 1473 aa9.1□□□□□ -0.95
GAPVD1-215ENST00000470056 PPM1GO15355 546 aaPredicted RBP9.09□□□□□ -0.95
GAPVD1-215ENST00000470056 SIRT1Q96EB6 747 aa9.09□□□□□ -0.95
GAPVD1-215ENST00000470056 THEMISQ8N1K5 641 aaPredicted RBP9.09□□□□□ -0.95
GAPVD1-215ENST00000470056 A2ML1A8K2U0 1454 aa9.09□□□□□ -0.95
GAPVD1-215ENST00000470056 BLMP54132 1417 aaPredicted RBP9.08□□□□□ -0.96
GAPVD1-215ENST00000470056 SLC12A5Q9H2X9 1139 aa9.08□□□□□ -0.96
GAPVD1-215ENST00000470056 ABCC11Q96J66 1382 aa9.08□□□□□ -0.96
GAPVD1-215ENST00000470056 CABP2Q9NPB3 220 aa9.08□□□□□ -0.96
GAPVD1-215ENST00000470056 POLR3AO14802 1390 aaPredicted RBP9.08□□□□□ -0.96
GAPVD1-215ENST00000470056 RCAN3Q9UKA8 241 aa9.08□□□□□ -0.96
GAPVD1-215ENST00000470056 GOLGA2Q08379 1002 aa9.07□□□□□ -0.96
GAPVD1-215ENST00000470056 SALL2Q9Y467 1007 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-215ENST00000470056 TMEM131LA2VDJ0 1609 aa9.07□□□□□ -0.96
GAPVD1-215ENST00000470056 DLC1Q96QB1 1528 aa9.07□□□□□ -0.96
GAPVD1-215ENST00000470056 TMEM2Q9UHN6 1383 aa9.07□□□□□ -0.96
GAPVD1-215ENST00000470056 CLTCQ00610 1675 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-215ENST00000470056 ADAMTS8Q9UP79 889 aa9.06□□□□□ -0.96
GAPVD1-215ENST00000470056 CDK19Q9BWU1 502 aa9.06□□□□□ -0.96
GAPVD1-215ENST00000470056 MAPK8IP3Q9UPT6 1336 aa9.06□□□□□ -0.96
GAPVD1-215ENST00000470056 CANXP27824 592 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-215ENST00000470056 CCDC136Q96JN2 1154 aa9.05□□□□□ -0.96
GAPVD1-215ENST00000470056 TNNT2P45379 298 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-215ENST00000470056 TXNDC2Q86VQ3 553 aa9.05□□□□□ -0.96
GAPVD1-215ENST00000470056 E9PSI1 815 aa9.05□□□□□ -0.96
GAPVD1-215ENST00000470056 ALKQ9UM73 1620 aa9.04□□□□□ -0.96
GAPVD1-215ENST00000470056 QRICH2Q9H0J4 1663 aa9.04□□□□□ -0.96
GAPVD1-215ENST00000470056 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-215ENST00000470056 FAM135BQ49AJ0 1406 aa9.04□□□□□ -0.96
GAPVD1-215ENST00000470056 BECN1Q14457 450 aa9.04□□□□□ -0.96
GAPVD1-215ENST00000470056 RUNDC1Q96C34 613 aa9.04□□□□□ -0.96
GAPVD1-215ENST00000470056 ZNF692Q9BU19 519 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-215ENST00000470056 PLEKHG1Q9ULL1 1385 aa9.03□□□□□ -0.96
GAPVD1-215ENST00000470056 IRX6P78412 446 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-215ENST00000470056 SIGLEC1Q9BZZ2 1709 aa9.03□□□□□ -0.96
GAPVD1-215ENST00000470056 CARD14Q9BXL6 1004 aa9.03□□□□□ -0.96
GAPVD1-215ENST00000470056 WASLO00401 505 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-215ENST00000470056 RRP1P56182 461 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-215ENST00000470056 PLPPR3Q6T4P5 718 aa9.03□□□□□ -0.96
GAPVD1-215ENST00000470056 NCBP3Q53F19 620 aaKnown RBP9.02□□□□□ -0.96
GAPVD1-215ENST00000470056 U2AF1L5P0DN76 240 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-215ENST00000470056 U2AF1Q01081 240 aaKnown RBP eCLIP9.02□□□□□ -0.972e-9■□□□□ 11.3
GAPVD1-215ENST00000470056 MYH16Q9H6N6 1097 aa9.02□□□□□ -0.97
GAPVD1-215ENST00000470056 KIF13AQ9H1H9 1805 aa9.02□□□□□ -0.97
GAPVD1-215ENST00000470056 NCLP19338 710 aaKnown RBP9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 CABP1Q9NZU7 370 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 PTPRMP28827 1452 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 ATP7BP35670 1465 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 A0A1W2PP64 1363 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 MTHFSP49914 203 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 COG3Q96JB2 828 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 TULP4Q9NRJ4 1543 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 USP32Q8NFA0 1604 aa9.01□□□□□ -0.97
GAPVD1-215ENST00000470056 CALD1Q05682 793 aaKnown RBP9□□□□□ -0.97
GAPVD1-215ENST00000470056 CFAP65Q6ZU64 1925 aaKnown RBP9□□□□□ -0.97
GAPVD1-215ENST00000470056 TRIM44Q96DX7 344 aaPredicted RBP9□□□□□ -0.97
GAPVD1-215ENST00000470056 TBX22Q9Y458 520 aa9□□□□□ -0.97
GAPVD1-215ENST00000470056 U2SURPO15042 1029 aaKnown RBP9□□□□□ -0.97
GAPVD1-215ENST00000470056 MED14O60244 1454 aa9□□□□□ -0.97
GAPVD1-215ENST00000470056 APAF1O14727 1248 aa9□□□□□ -0.97
GAPVD1-215ENST00000470056 DIAPH1O60610 1272 aaKnown RBP9□□□□□ -0.97
GAPVD1-215ENST00000470056 HSP90AA1P07900 732 aaKnown RBP8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 MS4A1P11836 297 aa8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 TECPR2O15040 1411 aa8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 CCDC146Q8IYE0 955 aa8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 RNF123Q5XPI4 1314 aa8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 ARHGEF28Q8N1W1 1705 aaKnown RBP8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 GGNBP2Q9H3C7 697 aa8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 NUDT16Q96DE0 195 aaKnown RBP8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 MYOM1P52179 1685 aa8.99□□□□□ -0.97
GAPVD1-215ENST00000470056 WAPLQ7Z5K2 1190 aa8.98□□□□□ -0.97
GAPVD1-215ENST00000470056 WDR63Q8IWG1 891 aa8.98□□□□□ -0.97
GAPVD1-215ENST00000470056 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
GAPVD1-215ENST00000470056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.98□□□□□ -0.97
GAPVD1-215ENST00000470056 EDC4Q6P2E9 1401 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-215ENST00000470056 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
GAPVD1-215ENST00000470056 PPIP5K1Q6PFW1 1433 aa8.97□□□□□ -0.97
GAPVD1-215ENST00000470056 PIK3R4Q99570 1358 aa8.97□□□□□ -0.97
GAPVD1-215ENST00000470056 LMOD3Q0VAK6 560 aa8.97□□□□□ -0.97
GAPVD1-215ENST00000470056 CEBPAP49715 358 aaPredicted RBP8.96□□□□□ -0.97
GAPVD1-215ENST00000470056 CCDC27Q2M243 656 aa8.96□□□□□ -0.97
GAPVD1-215ENST00000470056 METP08581 1390 aa8.96□□□□□ -0.97
GAPVD1-215ENST00000470056 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.97
GAPVD1-215ENST00000470056 GOLGA6L22H0YM25 854 aa8.96□□□□□ -0.97
GAPVD1-215ENST00000470056 CT47B1P0C2W7 299 aaPredicted RBP8.96□□□□□ -0.97
GAPVD1-215ENST00000470056 SLFN5Q08AF3 891 aa8.96□□□□□ -0.97
GAPVD1-215ENST00000470056 AAMPQ13685 434 aa8.96□□□□□ -0.97
GAPVD1-215ENST00000470056 FYB1O15117 783 aa8.96□□□□□ -0.98
GAPVD1-215ENST00000470056 HAP1P54257 671 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms