RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NGEFQ8N5V2 710 aa13.26□□□□□ -0.29
SMC4-210ENST00000469762 ABCA9Q8IUA7 1624 aa13.26□□□□□ -0.29
SMC4-210ENST00000469762 PPRC1Q5VV67 1664 aaKnown RBP13.26□□□□□ -0.29
SMC4-210ENST00000469762 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
SMC4-210ENST00000469762 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
SMC4-210ENST00000469762 EFCAB6Q5THR3 1501 aa13.25□□□□□ -0.29
SMC4-210ENST00000469762 NSD3Q9BZ95 1437 aa13.25□□□□□ -0.29
SMC4-210ENST00000469762 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
SMC4-210ENST00000469762 QRICH2Q9H0J4 1663 aa13.24□□□□□ -0.29
SMC4-210ENST00000469762 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
SMC4-210ENST00000469762 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
SMC4-210ENST00000469762 TCP11L2Q8N4U5 519 aa13.23□□□□□ -0.29
SMC4-210ENST00000469762 SLC12A5Q9H2X9 1139 aa13.23□□□□□ -0.29
SMC4-210ENST00000469762 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
SMC4-210ENST00000469762 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
SMC4-210ENST00000469762 KIF3BO15066 747 aa13.23□□□□□ -0.29
SMC4-210ENST00000469762 ADGRB3O60242 1522 aa13.23□□□□□ -0.29
SMC4-210ENST00000469762 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
SMC4-210ENST00000469762 TBC1D32Q96NH3 1257 aa13.22□□□□□ -0.29
SMC4-210ENST00000469762 BCL2L13Q9BXK5 485 aa13.22□□□□□ -0.29
SMC4-210ENST00000469762 PPLO60437 1756 aa13.22□□□□□ -0.29
SMC4-210ENST00000469762 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
SMC4-210ENST00000469762 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
SMC4-210ENST00000469762 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
SMC4-210ENST00000469762 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.29
SMC4-210ENST00000469762 NOS1P29475 1434 aa13.21□□□□□ -0.29
SMC4-210ENST00000469762 KANK1Q14678 1352 aa13.21□□□□□ -0.29
SMC4-210ENST00000469762 KIDINS220Q9ULH0 1771 aa13.21□□□□□ -0.3
SMC4-210ENST00000469762 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.3
SMC4-210ENST00000469762 ADGRB2O60241 1585 aa13.2□□□□□ -0.3
SMC4-210ENST00000469762 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
SMC4-210ENST00000469762 FANCAO15360 1455 aa13.2□□□□□ -0.3
SMC4-210ENST00000469762 WDR63Q8IWG1 891 aa13.19□□□□□ -0.3
SMC4-210ENST00000469762 MTHFSP49914 203 aa13.18□□□□□ -0.3
SMC4-210ENST00000469762 CCDC27Q2M243 656 aa13.18□□□□□ -0.3
SMC4-210ENST00000469762 MORC1Q86VD1 984 aa13.18□□□□□ -0.3
SMC4-210ENST00000469762 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
SMC4-210ENST00000469762 CANXP27824 592 aaKnown RBP13.18□□□□□ -0.3
SMC4-210ENST00000469762 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
SMC4-210ENST00000469762 PMFBP1Q8TBY8 1022 aa13.17□□□□□ -0.3
SMC4-210ENST00000469762 TRAK1Q9UPV9 953 aa13.17□□□□□ -0.3
SMC4-210ENST00000469762 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
SMC4-210ENST00000469762 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
SMC4-210ENST00000469762 TULP4Q9NRJ4 1543 aa13.16□□□□□ -0.3
SMC4-210ENST00000469762 C14orf93Q9H972 538 aaKnown RBP13.16□□□□□ -0.3
SMC4-210ENST00000469762 TMEM132EQ6IEE7 984 aa13.15□□□□□ -0.3
SMC4-210ENST00000469762 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
SMC4-210ENST00000469762 CD109Q6YHK3 1445 aa13.15□□□□□ -0.3
SMC4-210ENST00000469762 AAMPQ13685 434 aa13.15□□□□□ -0.3
SMC4-210ENST00000469762 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
SMC4-210ENST00000469762 RRAGDQ9NQL2 400 aaPredicted RBP13.14□□□□□ -0.31
SMC4-210ENST00000469762 ARHGEF28Q8N1W1 1705 aaKnown RBP13.14□□□□□ -0.31
SMC4-210ENST00000469762 BECN1Q14457 450 aa13.14□□□□□ -0.31
SMC4-210ENST00000469762 NPATQ14207 1427 aa13.14□□□□□ -0.31
SMC4-210ENST00000469762 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
SMC4-210ENST00000469762 TSR2Q969E8 191 aaKnown RBP13.13□□□□□ -0.31
SMC4-210ENST00000469762 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
SMC4-210ENST00000469762 SIGLEC1Q9BZZ2 1709 aa13.12□□□□□ -0.31
SMC4-210ENST00000469762 GLI2P10070 1586 aa13.12□□□□□ -0.31
SMC4-210ENST00000469762 COL3A1P02461 1466 aaPredicted RBP13.12□□□□□ -0.31
SMC4-210ENST00000469762 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
SMC4-210ENST00000469762 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
SMC4-210ENST00000469762 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
SMC4-210ENST00000469762 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
SMC4-210ENST00000469762 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
SMC4-210ENST00000469762 TRIM27P14373 513 aa13.1□□□□□ -0.31
SMC4-210ENST00000469762 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
SMC4-210ENST00000469762 XRCC6P12956 609 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMC4-210ENST00000469762 CAMSAP1Q5T5Y3 1602 aa13.09□□□□□ -0.31
SMC4-210ENST00000469762 ANKRD36BQ8N2N9 1353 aa13.09□□□□□ -0.31
SMC4-210ENST00000469762 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
SMC4-210ENST00000469762 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
SMC4-210ENST00000469762 MCM4P33991 863 aa13.08□□□□□ -0.31
SMC4-210ENST00000469762 DDIT3P35638 169 aa13.08□□□□□ -0.31
SMC4-210ENST00000469762 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.31
SMC4-210ENST00000469762 EXOSC9Q06265 439 aaKnown RBP13.08□□□□□ -0.32
SMC4-210ENST00000469762 HDAC1Q13547 482 aaPredicted RBP13.08□□□□□ -0.32
SMC4-210ENST00000469762 U2AF1L5P0DN76 240 aaPredicted RBP13.08□□□□□ -0.32
SMC4-210ENST00000469762 U2AF1Q01081 240 aaKnown RBP eCLIP13.08□□□□□ -0.325e-12■■■■■ 47.2
SMC4-210ENST00000469762 PANK2Q9BZ23 570 aa13.08□□□□□ -0.32
SMC4-210ENST00000469762 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
SMC4-210ENST00000469762 PIK3C2BO00750 1634 aa13.07□□□□□ -0.32
SMC4-210ENST00000469762 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
SMC4-210ENST00000469762 NCOA3Q9Y6Q9 1424 aa13.07□□□□□ -0.32
SMC4-210ENST00000469762 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
SMC4-210ENST00000469762 SMC5Q8IY18 1101 aa13.07□□□□□ -0.32
SMC4-210ENST00000469762 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
SMC4-210ENST00000469762 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
SMC4-210ENST00000469762 UPF2Q9HAU5 1272 aaKnown RBP13.06□□□□□ -0.32
SMC4-210ENST00000469762 TMPOP42166 694 aaKnown RBP13.06□□□□□ -0.32
SMC4-210ENST00000469762 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
SMC4-210ENST00000469762 NSD2O96028 1365 aa13.05□□□□□ -0.32
SMC4-210ENST00000469762 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
SMC4-210ENST00000469762 A0A1W2PP64 1363 aa13.05□□□□□ -0.32
SMC4-210ENST00000469762 CD163L1Q9NR16 1453 aa13.05□□□□□ -0.32
SMC4-210ENST00000469762 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
SMC4-210ENST00000469762 ZBTB40Q9NUA8 1239 aa13.05□□□□□ -0.32
SMC4-210ENST00000469762 ABCC11Q96J66 1382 aa13.05□□□□□ -0.32
SMC4-210ENST00000469762 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
SMC4-210ENST00000469762 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms