RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
C19orf54-202ENST00000469741 LRPPRCP42704 1394 aaKnown RBP21.9■■□□□ 1.1
C19orf54-202ENST00000469741 NALCNQ8IZF0 1738 aa21.9■■□□□ 1.1
C19orf54-202ENST00000469741 TOM1O60784 492 aa21.89■■□□□ 1.1
C19orf54-202ENST00000469741 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.1
C19orf54-202ENST00000469741 TRAK1Q9UPV9 953 aa21.89■■□□□ 1.1
C19orf54-202ENST00000469741 TRPM1Q7Z4N2 1603 aa21.88■■□□□ 1.09
C19orf54-202ENST00000469741 ABCC11Q96J66 1382 aa21.87■■□□□ 1.09
C19orf54-202ENST00000469741 C19orf44Q9H6X5 657 aa21.87■■□□□ 1.09
C19orf54-202ENST00000469741 MSH6P52701 1360 aa21.86■■□□□ 1.09
C19orf54-202ENST00000469741 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
C19orf54-202ENST00000469741 LAMC1P11047 1609 aa21.85■■□□□ 1.09
C19orf54-202ENST00000469741 ROCK2O75116 1388 aaKnown RBP21.85■■□□□ 1.09
C19orf54-202ENST00000469741 GPRASP1Q5JY77 1395 aa21.85■■□□□ 1.09
C19orf54-202ENST00000469741 TECPR2O15040 1411 aa21.85■■□□□ 1.09
C19orf54-202ENST00000469741 HSPA1LP34931 641 aa21.84■■□□□ 1.09
C19orf54-202ENST00000469741 PRAM1Q96QH2 718 aa21.84■■□□□ 1.09
C19orf54-202ENST00000469741 SLAIN2Q9P270 581 aa21.84■■□□□ 1.09
C19orf54-202ENST00000469741 NUTM2FA1L443 756 aa21.83■■□□□ 1.09
C19orf54-202ENST00000469741 KNDC1Q76NI1 1749 aa21.82■■□□□ 1.08
C19orf54-202ENST00000469741 ADGRL3Q9HAR2 1447 aa21.81■■□□□ 1.08
C19orf54-202ENST00000469741 STAC3Q96MF2 364 aa21.81■■□□□ 1.08
C19orf54-202ENST00000469741 DDX17Q92841 729 aaKnown RBP21.8■■□□□ 1.08
C19orf54-202ENST00000469741 PRKRIP1Q9H875 184 aaPredicted RBP21.8■■□□□ 1.08
C19orf54-202ENST00000469741 NCOA3Q9Y6Q9 1424 aa21.8■■□□□ 1.08
C19orf54-202ENST00000469741 ROBO1Q9Y6N7 1651 aa21.79■■□□□ 1.08
C19orf54-202ENST00000469741 ATF3P18847 181 aa21.79■■□□□ 1.08
C19orf54-202ENST00000469741 MST1RQ04912 1400 aa21.77■■□□□ 1.08
C19orf54-202ENST00000469741 ST20-MTHFSA0A0A6YYL1 179 aa21.77■■□□□ 1.08
C19orf54-202ENST00000469741 ORAI2Q96SN7 254 aa21.76■■□□□ 1.07
C19orf54-202ENST00000469741 CADPS2Q86UW7 1296 aa21.76■■□□□ 1.07
C19orf54-202ENST00000469741 KIAA1210Q9ULL0 1709 aa21.76■■□□□ 1.07
C19orf54-202ENST00000469741 MINK1Q8N4C8 1332 aaPredicted RBP21.75■■□□□ 1.07
C19orf54-202ENST00000469741 ARHGEF28Q8N1W1 1705 aaKnown RBP21.75■■□□□ 1.07
C19orf54-202ENST00000469741 BRINP3Q76B58 766 aa21.74■■□□□ 1.07
C19orf54-202ENST00000469741 POGKQ9P215 609 aa21.74■■□□□ 1.07
C19orf54-202ENST00000469741 FAM135BQ49AJ0 1406 aa21.74■■□□□ 1.07
C19orf54-202ENST00000469741 SIRT1Q96EB6 747 aa21.73■■□□□ 1.07
C19orf54-202ENST00000469741 RGPD8O14715 1765 aaPredicted RBP21.72■■□□□ 1.07
C19orf54-202ENST00000469741 DLC1Q96QB1 1528 aa21.72■■□□□ 1.07
C19orf54-202ENST00000469741 C1orf167Q5SNV9 1468 aa21.7■■□□□ 1.06
C19orf54-202ENST00000469741 DCCP43146 1447 aa21.7■■□□□ 1.06
C19orf54-202ENST00000469741 PRR36Q9H6K5 1346 aa21.66■■□□□ 1.06
C19orf54-202ENST00000469741 CDC42BPGQ6DT37 1551 aa21.65■■□□□ 1.06
C19orf54-202ENST00000469741 POLR3GLQ9BT43 218 aa21.65■■□□□ 1.06
C19orf54-202ENST00000469741 FMN2Q9NZ56 1722 aa21.65■■□□□ 1.06
C19orf54-202ENST00000469741 XPCQ01831 940 aaPredicted RBP21.64■■□□□ 1.06
C19orf54-202ENST00000469741 ESCO1Q5FWF5 840 aa21.64■■□□□ 1.06
C19orf54-202ENST00000469741 USP32Q8NFA0 1604 aa21.64■■□□□ 1.05
C19orf54-202ENST00000469741 CCDC184Q52MB2 194 aa21.63■■□□□ 1.05
C19orf54-202ENST00000469741 TESK2Q96S53 571 aa21.62■■□□□ 1.05
C19orf54-202ENST00000469741 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
C19orf54-202ENST00000469741 PHLPP1O60346 1717 aa21.62■■□□□ 1.05
C19orf54-202ENST00000469741 KTN1Q86UP2 1357 aaKnown RBP21.61■■□□□ 1.05
C19orf54-202ENST00000469741 WASLO00401 505 aaPredicted RBP21.61■■□□□ 1.05
C19orf54-202ENST00000469741 FOXO3O43524 673 aa21.6■■□□□ 1.05
C19orf54-202ENST00000469741 CENPJQ9HC77 1338 aaPredicted RBP21.59■■□□□ 1.05
C19orf54-202ENST00000469741 PMFBP1Q8TBY8 1022 aa21.59■■□□□ 1.05
C19orf54-202ENST00000469741 CDK19Q9BWU1 502 aa21.59■■□□□ 1.05
C19orf54-202ENST00000469741 COL16A1Q07092 1604 aaPredicted RBP21.59■■□□□ 1.05
C19orf54-202ENST00000469741 ADGRB2O60241 1585 aa21.58■■□□□ 1.05
C19orf54-202ENST00000469741 QRICH2Q9H0J4 1663 aa21.58■■□□□ 1.05
C19orf54-202ENST00000469741 HNRNPUQ00839 825 aaKnown RBP eCLIP21.58■■□□□ 1.04
C19orf54-202ENST00000469741 CABP2Q9NPB3 220 aa21.57■■□□□ 1.04
C19orf54-202ENST00000469741 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
C19orf54-202ENST00000469741 NHSL1Q5SYE7 1610 aa21.56■■□□□ 1.04
C19orf54-202ENST00000469741 AHDC1Q5TGY3 1603 aaPredicted RBP21.56■■□□□ 1.04
C19orf54-202ENST00000469741 TMF1P82094 1093 aa21.56■■□□□ 1.04
C19orf54-202ENST00000469741 TULP4Q9NRJ4 1543 aa21.54■■□□□ 1.04
C19orf54-202ENST00000469741 DISP3Q9P2K9 1392 aa21.54■■□□□ 1.04
C19orf54-202ENST00000469741 RALBP1Q15311 655 aa21.53■■□□□ 1.04
C19orf54-202ENST00000469741 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
C19orf54-202ENST00000469741 PHF8Q9UPP1 1060 aa21.51■■□□□ 1.03
C19orf54-202ENST00000469741 ATP7BP35670 1465 aa21.51■■□□□ 1.03
C19orf54-202ENST00000469741 SOS2Q07890 1332 aaPredicted RBP21.5■■□□□ 1.03
C19orf54-202ENST00000469741 FAM9BQ8IZU0 186 aa21.5■■□□□ 1.03
C19orf54-202ENST00000469741 EIF3AQ14152 1382 aaKnown RBP21.49■■□□□ 1.03
C19orf54-202ENST00000469741 PXDNQ92626 1479 aa21.48■■□□□ 1.03
C19orf54-202ENST00000469741 PER1O15534 1290 aaPredicted RBP21.48■■□□□ 1.03
C19orf54-202ENST00000469741 SRPK2P78362 688 aaKnown RBP21.48■■□□□ 1.03
C19orf54-202ENST00000469741 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
C19orf54-202ENST00000469741 MYBBP1AQ9BQG0 1328 aaKnown RBP21.47■■□□□ 1.03
C19orf54-202ENST00000469741 SLC24A1O60721 1099 aa21.46■■□□□ 1.03
C19orf54-202ENST00000469741 CDCA8Q53HL2 280 aa21.46■■□□□ 1.03
C19orf54-202ENST00000469741 ZBED9Q6R2W3 1325 aa21.46■■□□□ 1.03
C19orf54-202ENST00000469741 BRD4O60885 1362 aaPredicted RBP21.46■■□□□ 1.03
C19orf54-202ENST00000469741 KRT28Q7Z3Y7 464 aa21.46■■□□□ 1.03
C19orf54-202ENST00000469741 ANKARQ7Z5J8 1434 aa21.45■■□□□ 1.02
C19orf54-202ENST00000469741 PARD3Q8TEW0 1356 aa21.45■■□□□ 1.02
C19orf54-202ENST00000469741 LRP6O75581 1613 aa21.44■■□□□ 1.02
C19orf54-202ENST00000469741 NUTM2BA6NNL0 878 aaPredicted RBP21.43■■□□□ 1.02
C19orf54-202ENST00000469741 NUTM2EB1AL46 878 aaPredicted RBP21.43■■□□□ 1.02
C19orf54-202ENST00000469741 NUTM2AQ8IVF1 878 aaPredicted RBP21.43■■□□□ 1.02
C19orf54-202ENST00000469741 CABP1Q9NZU7 370 aa21.43■■□□□ 1.02
C19orf54-202ENST00000469741 JCADQ9P266 1359 aa21.43■■□□□ 1.02
C19orf54-202ENST00000469741 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
C19orf54-202ENST00000469741 NPHP3Q7Z494 1330 aa21.43■■□□□ 1.02
C19orf54-202ENST00000469741 TOPAZ1Q8N9V7 1692 aa21.42■■□□□ 1.02
C19orf54-202ENST00000469741 PNPLA6Q8IY17 1366 aa21.42■■□□□ 1.02
C19orf54-202ENST00000469741 LRRC59Q96AG4 307 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 394.3 ms