RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 KIF1BO60333 1816 aa19.46■□□□□ 0.71
TRAPPC12-216ENST00000469400 FOXD1Q16676 465 aa19.46■□□□□ 0.71
TRAPPC12-216ENST00000469400 MYOM2P54296 1465 aa19.46■□□□□ 0.71
TRAPPC12-216ENST00000469400 NPHP3Q7Z494 1330 aa19.46■□□□□ 0.71
TRAPPC12-216ENST00000469400 COL22A1Q8NFW1 1626 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC12-216ENST00000469400 BCL9LQ86UU0 1499 aa19.45■□□□□ 0.7
TRAPPC12-216ENST00000469400 NAIPQ13075 1403 aa19.43■□□□□ 0.7
TRAPPC12-216ENST00000469400 FOXO3O43524 673 aa19.43■□□□□ 0.7
TRAPPC12-216ENST00000469400 XPCQ01831 940 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC12-216ENST00000469400 CCDC125Q86Z20 511 aa19.43■□□□□ 0.7
TRAPPC12-216ENST00000469400 PXDNQ92626 1479 aa19.42■□□□□ 0.7
TRAPPC12-216ENST00000469400 GJD4Q96KN9 370 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC12-216ENST00000469400 EP400Q96L91 3159 aa19.4■□□□□ 0.7
TRAPPC12-216ENST00000469400 CDC42BPGQ6DT37 1551 aa19.39■□□□□ 0.69
TRAPPC12-216ENST00000469400 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
TRAPPC12-216ENST00000469400 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
TRAPPC12-216ENST00000469400 SLC4A1APQ9BWU0 796 aaKnown RBP19.38■□□□□ 0.69
TRAPPC12-216ENST00000469400 WAPLQ7Z5K2 1190 aa19.37■□□□□ 0.69
TRAPPC12-216ENST00000469400 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
TRAPPC12-216ENST00000469400 ADGRF5Q8IZF2 1346 aa19.36■□□□□ 0.69
TRAPPC12-216ENST00000469400 UNC5CLQ8IV45 518 aa19.36■□□□□ 0.69
TRAPPC12-216ENST00000469400 STK26Q9P289 416 aa19.36■□□□□ 0.69
TRAPPC12-216ENST00000469400 PPLO60437 1756 aa19.35■□□□□ 0.69
TRAPPC12-216ENST00000469400 MARF1Q9Y4F3 1742 aaKnown RBP19.33■□□□□ 0.68
TRAPPC12-216ENST00000469400 RALGAPBQ86X10 1494 aa19.33■□□□□ 0.68
TRAPPC12-216ENST00000469400 SPATA31A3Q5VYP0 1347 aa19.32■□□□□ 0.68
TRAPPC12-216ENST00000469400 SLIT2O94813 1529 aa19.32■□□□□ 0.68
TRAPPC12-216ENST00000469400 TECPR2O15040 1411 aa19.32■□□□□ 0.68
TRAPPC12-216ENST00000469400 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
TRAPPC12-216ENST00000469400 BLMP54132 1417 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC12-216ENST00000469400 ABCC11Q96J66 1382 aa19.31■□□□□ 0.68
TRAPPC12-216ENST00000469400 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
TRAPPC12-216ENST00000469400 TMEM132EQ6IEE7 984 aa19.3■□□□□ 0.68
TRAPPC12-216ENST00000469400 GLI3P10071 1580 aa19.3■□□□□ 0.68
TRAPPC12-216ENST00000469400 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.28■□□□□ 0.68
TRAPPC12-216ENST00000469400 KRT28Q7Z3Y7 464 aa19.28■□□□□ 0.68
TRAPPC12-216ENST00000469400 DEFB132Q7Z7B7 95 aa19.28■□□□□ 0.68
TRAPPC12-216ENST00000469400 CCDC144AA2RUR9 1427 aa19.27■□□□□ 0.68
TRAPPC12-216ENST00000469400 SEPT12Q8IYM1 358 aa19.27■□□□□ 0.68
TRAPPC12-216ENST00000469400 ANKRD30BQ9BXX2 1392 aa19.27■□□□□ 0.68
TRAPPC12-216ENST00000469400 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
TRAPPC12-216ENST00000469400 HAP1P54257 671 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC12-216ENST00000469400 VPS72Q15906 364 aa19.25■□□□□ 0.67
TRAPPC12-216ENST00000469400 CABLES1Q8TDN4 633 aa19.25■□□□□ 0.67
TRAPPC12-216ENST00000469400 SF3B2Q13435 895 aaKnown RBP19.24■□□□□ 0.67
TRAPPC12-216ENST00000469400 USP32Q8NFA0 1604 aa19.24■□□□□ 0.67
TRAPPC12-216ENST00000469400 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC12-216ENST00000469400 PHF8Q9UPP1 1060 aa19.23■□□□□ 0.67
TRAPPC12-216ENST00000469400 PIK3C2GO75747 1445 aa19.23■□□□□ 0.67
TRAPPC12-216ENST00000469400 YTHDC2Q9H6S0 1430 aaKnown RBP19.23■□□□□ 0.67
TRAPPC12-216ENST00000469400 KIF1AQ12756 1690 aa19.23■□□□□ 0.67
TRAPPC12-216ENST00000469400 FMN2Q9NZ56 1722 aa19.22■□□□□ 0.67
TRAPPC12-216ENST00000469400 PLEKHG5O94827 1062 aa19.22■□□□□ 0.67
TRAPPC12-216ENST00000469400 PSME1Q06323 249 aa19.22■□□□□ 0.67
TRAPPC12-216ENST00000469400 SIRT1Q96EB6 747 aa19.22■□□□□ 0.67
TRAPPC12-216ENST00000469400 TNS3Q68CZ2 1445 aa19.22■□□□□ 0.67
TRAPPC12-216ENST00000469400 CCDC9Q9Y3X0 531 aaKnown RBP19.21■□□□□ 0.67
TRAPPC12-216ENST00000469400 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
TRAPPC12-216ENST00000469400 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
TRAPPC12-216ENST00000469400 KRT27Q7Z3Y8 459 aa19.2■□□□□ 0.66
TRAPPC12-216ENST00000469400 SBNO1A3KN83 1393 aa19.19■□□□□ 0.66
TRAPPC12-216ENST00000469400 LMOD2Q6P5Q4 547 aa19.18■□□□□ 0.66
TRAPPC12-216ENST00000469400 MPHOSPH9Q99550 1183 aa19.18■□□□□ 0.66
TRAPPC12-216ENST00000469400 C14orf93Q9H972 538 aaKnown RBP19.18■□□□□ 0.66
TRAPPC12-216ENST00000469400 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
TRAPPC12-216ENST00000469400 FAM83GA6ND36 823 aa19.17■□□□□ 0.66
TRAPPC12-216ENST00000469400 ARHGEF10O15013 1369 aa19.16■□□□□ 0.66
TRAPPC12-216ENST00000469400 NRXN1Q9ULB1 1477 aa19.16■□□□□ 0.66
TRAPPC12-216ENST00000469400 SAFB2Q14151 953 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■■□□ 15.7
TRAPPC12-216ENST00000469400 CFAP70Q5T0N1 1121 aa19.14■□□□□ 0.65
TRAPPC12-216ENST00000469400 PRAM1Q96QH2 718 aa19.14■□□□□ 0.65
TRAPPC12-216ENST00000469400 DHX57Q6P158 1386 aaKnown RBP19.14■□□□□ 0.65
TRAPPC12-216ENST00000469400 NWD2Q9ULI1 1742 aa19.14■□□□□ 0.65
TRAPPC12-216ENST00000469400 A0A0G2JS52 829 aa19.13■□□□□ 0.65
TRAPPC12-216ENST00000469400 PSDA5PKW4 1024 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC12-216ENST00000469400 MYT1Q01538 1121 aa19.13■□□□□ 0.65
TRAPPC12-216ENST00000469400 PMFBP1Q8TBY8 1022 aa19.13■□□□□ 0.65
TRAPPC12-216ENST00000469400 PLCH1Q4KWH8 1693 aa19.13■□□□□ 0.65
TRAPPC12-216ENST00000469400 RGPD8O14715 1765 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC12-216ENST00000469400 BAG6P46379 1132 aa19.12■□□□□ 0.65
TRAPPC12-216ENST00000469400 FAM98CQ17RN3 349 aaKnown RBP19.12■□□□□ 0.65
TRAPPC12-216ENST00000469400 LRP5O75197 1615 aa19.11■□□□□ 0.65
TRAPPC12-216ENST00000469400 HRCP23327 699 aa19.1■□□□□ 0.65
TRAPPC12-216ENST00000469400 BTG4Q9NY30 223 aa19.1■□□□□ 0.65
TRAPPC12-216ENST00000469400 ABCA3Q99758 1704 aa19.09■□□□□ 0.65
TRAPPC12-216ENST00000469400 POGKQ9P215 609 aa19.09■□□□□ 0.65
TRAPPC12-216ENST00000469400 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.65
TRAPPC12-216ENST00000469400 EN1Q05925 392 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC12-216ENST00000469400 FAM182BQ5T319 152 aa19.06■□□□□ 0.64
TRAPPC12-216ENST00000469400 SPATA31A5Q5VU36 1347 aa19.04■□□□□ 0.64
TRAPPC12-216ENST00000469400 SPATA31A7Q8IWB4 1347 aa19.04■□□□□ 0.64
TRAPPC12-216ENST00000469400 NRAPQ86VF7 1730 aa19.04■□□□□ 0.64
TRAPPC12-216ENST00000469400 HIRIP3Q9BW71 556 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC12-216ENST00000469400 DLC1Q96QB1 1528 aa19.04■□□□□ 0.64
TRAPPC12-216ENST00000469400 GPRASP1Q5JY77 1395 aa19.04■□□□□ 0.64
TRAPPC12-216ENST00000469400 ACIN1Q9UKV3 1341 aaKnown RBP19.02■□□□□ 0.64
TRAPPC12-216ENST00000469400 R3HDM1Q15032 1099 aaKnown RBP19.02■□□□□ 0.64
TRAPPC12-216ENST00000469400 PRR36Q9H6K5 1346 aa19.01■□□□□ 0.63
TRAPPC12-216ENST00000469400 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC12-216ENST00000469400 TRAK1Q9UPV9 953 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms