RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
SSBP1-208ENST00000469123 POGKQ9P215 609 aa12.21□□□□□ -0.45
SSBP1-208ENST00000469123 ADGRB2O60241 1585 aa12.21□□□□□ -0.46
SSBP1-208ENST00000469123 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
SSBP1-208ENST00000469123 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
SSBP1-208ENST00000469123 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
SSBP1-208ENST00000469123 RALGAPBQ86X10 1494 aa12.2□□□□□ -0.46
SSBP1-208ENST00000469123 MST1RQ04912 1400 aa12.2□□□□□ -0.46
SSBP1-208ENST00000469123 TRAK1Q9UPV9 953 aa12.19□□□□□ -0.46
SSBP1-208ENST00000469123 ROBO1Q9Y6N7 1651 aa12.19□□□□□ -0.46
SSBP1-208ENST00000469123 WAPLQ7Z5K2 1190 aa12.18□□□□□ -0.46
SSBP1-208ENST00000469123 C1orf167Q5SNV9 1468 aa12.17□□□□□ -0.46
SSBP1-208ENST00000469123 NBPF1Q3BBV0 1214 aa12.17□□□□□ -0.46
SSBP1-208ENST00000469123 PLEKHH1Q9ULM0 1364 aa12.17□□□□□ -0.46
SSBP1-208ENST00000469123 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
SSBP1-208ENST00000469123 ANKARQ7Z5J8 1434 aa12.16□□□□□ -0.46
SSBP1-208ENST00000469123 FMN2Q9NZ56 1722 aa12.16□□□□□ -0.46
SSBP1-208ENST00000469123 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.46
SSBP1-208ENST00000469123 CENPJQ9HC77 1338 aaPredicted RBP12.15□□□□□ -0.46
SSBP1-208ENST00000469123 NBPF8Q3BBV2 869 aa12.15□□□□□ -0.46
SSBP1-208ENST00000469123 KIF1AQ12756 1690 aa12.14□□□□□ -0.47
SSBP1-208ENST00000469123 CARD11Q9BXL7 1154 aa12.14□□□□□ -0.47
SSBP1-208ENST00000469123 SBNO2Q9Y2G9 1366 aa12.14□□□□□ -0.47
SSBP1-208ENST00000469123 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
SSBP1-208ENST00000469123 BRINP3Q76B58 766 aa12.13□□□□□ -0.47
SSBP1-208ENST00000469123 PHLPP1O60346 1717 aa12.13□□□□□ -0.47
SSBP1-208ENST00000469123 QRICH2Q9H0J4 1663 aa12.13□□□□□ -0.47
SSBP1-208ENST00000469123 NHSL1Q5SYE7 1610 aa12.12□□□□□ -0.47
SSBP1-208ENST00000469123 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-208ENST00000469123 HSPA1LP34931 641 aa12.12□□□□□ -0.47
SSBP1-208ENST00000469123 SAFB2Q14151 953 aaKnown RBP eCLIP12.12□□□□□ -0.47
SSBP1-208ENST00000469123 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-208ENST00000469123 ITSN1Q15811 1721 aa12.11□□□□□ -0.47
SSBP1-208ENST00000469123 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
SSBP1-208ENST00000469123 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
SSBP1-208ENST00000469123 COL16A1Q07092 1604 aaPredicted RBP12.09□□□□□ -0.47
SSBP1-208ENST00000469123 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
SSBP1-208ENST00000469123 JCADQ9P266 1359 aa12.08□□□□□ -0.48
SSBP1-208ENST00000469123 HIRIP3Q9BW71 556 aaPredicted RBP12.08□□□□□ -0.48
SSBP1-208ENST00000469123 LRRC59Q96AG4 307 aaKnown RBP12.07□□□□□ -0.48
SSBP1-208ENST00000469123 PUS7Q96PZ0 661 aaKnown RBP12.07□□□□□ -0.48
SSBP1-208ENST00000469123 PHF8Q9UPP1 1060 aa12.07□□□□□ -0.48
SSBP1-208ENST00000469123 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
SSBP1-208ENST00000469123 ATP7BP35670 1465 aa12.07□□□□□ -0.48
SSBP1-208ENST00000469123 ORAI2Q96SN7 254 aa12.06□□□□□ -0.48
SSBP1-208ENST00000469123 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
SSBP1-208ENST00000469123 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
SSBP1-208ENST00000469123 USP32Q8NFA0 1604 aa12.06□□□□□ -0.48
SSBP1-208ENST00000469123 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
SSBP1-208ENST00000469123 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
SSBP1-208ENST00000469123 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
SSBP1-208ENST00000469123 USP47Q96K76 1375 aa12.05□□□□□ -0.48
SSBP1-208ENST00000469123 PSME1Q06323 249 aa12.05□□□□□ -0.48
SSBP1-208ENST00000469123 TOPAZ1Q8N9V7 1692 aa12.05□□□□□ -0.48
SSBP1-208ENST00000469123 SPATA31A6Q5VVP1 1343 aa12.05□□□□□ -0.48
SSBP1-208ENST00000469123 SRPK2P78362 688 aaKnown RBP12.04□□□□□ -0.48
SSBP1-208ENST00000469123 NUDT16Q96DE0 195 aaKnown RBP12.04□□□□□ -0.48
SSBP1-208ENST00000469123 BRD4O60885 1362 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-208ENST00000469123 PXDNQ92626 1479 aa12.03□□□□□ -0.48
SSBP1-208ENST00000469123 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
SSBP1-208ENST00000469123 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
SSBP1-208ENST00000469123 FOXO3O43524 673 aa12.03□□□□□ -0.48
SSBP1-208ENST00000469123 CDCA8Q53HL2 280 aa12.03□□□□□ -0.48
SSBP1-208ENST00000469123 SBNO1A3KN83 1393 aa12.03□□□□□ -0.48
SSBP1-208ENST00000469123 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
SSBP1-208ENST00000469123 PRR36Q9H6K5 1346 aa12.02□□□□□ -0.49
SSBP1-208ENST00000469123 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-208ENST00000469123 ST20-MTHFSA0A0A6YYL1 179 aa12.01□□□□□ -0.49
SSBP1-208ENST00000469123 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
SSBP1-208ENST00000469123 ARHGEF10O15013 1369 aa12.01□□□□□ -0.49
SSBP1-208ENST00000469123 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
SSBP1-208ENST00000469123 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.49
SSBP1-208ENST00000469123 TMF1P82094 1093 aa12□□□□□ -0.49
SSBP1-208ENST00000469123 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
SSBP1-208ENST00000469123 PPIP5K1Q6PFW1 1433 aa12□□□□□ -0.49
SSBP1-208ENST00000469123 MYT1Q01538 1121 aa11.99□□□□□ -0.49
SSBP1-208ENST00000469123 KRT28Q7Z3Y7 464 aa11.99□□□□□ -0.49
SSBP1-208ENST00000469123 TESK2Q96S53 571 aa11.99□□□□□ -0.49
SSBP1-208ENST00000469123 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
SSBP1-208ENST00000469123 PNPLA6Q8IY17 1366 aa11.99□□□□□ -0.49
SSBP1-208ENST00000469123 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-208ENST00000469123 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
SSBP1-208ENST00000469123 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
SSBP1-208ENST00000469123 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-208ENST00000469123 TRPM3Q9HCF6 1732 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-208ENST00000469123 ACEP12821 1306 aa11.97□□□□□ -0.49
SSBP1-208ENST00000469123 DDX17Q92841 729 aaKnown RBP11.97□□□□□ -0.49
SSBP1-208ENST00000469123 AKAP12Q02952 1782 aa11.95□□□□□ -0.5
SSBP1-208ENST00000469123 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
SSBP1-208ENST00000469123 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
SSBP1-208ENST00000469123 CABP1Q9NZU7 370 aa11.95□□□□□ -0.5
SSBP1-208ENST00000469123 XPCQ01831 940 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-208ENST00000469123 TERF2IPQ9NYB0 399 aa11.94□□□□□ -0.5
SSBP1-208ENST00000469123 USP6P35125 1406 aa11.94□□□□□ -0.5
SSBP1-208ENST00000469123 MEX3CQ5U5Q3 659 aaKnown RBP11.93□□□□□ -0.5
SSBP1-208ENST00000469123 HDGFL2Q7Z4V5 671 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-208ENST00000469123 CPSF1Q10570 1443 aaKnown RBP11.93□□□□□ -0.5
SSBP1-208ENST00000469123 TTC21AQ8NDW8 1320 aa11.92□□□□□ -0.5
SSBP1-208ENST00000469123 MON2Q7Z3U7 1717 aa11.92□□□□□ -0.5
SSBP1-208ENST00000469123 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms