RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ANKRD30BQ9BXX2 1392 aa25.74■■□□□ 1.71
TRIM56-203ENST00000467847 RBM6P78332 1123 aaKnown RBP25.74■■□□□ 1.71
TRIM56-203ENST00000467847 QTRT2Q9H974 415 aaKnown RBP25.74■■□□□ 1.71
TRIM56-203ENST00000467847 ADAMTS2O95450 1211 aa25.73■■□□□ 1.71
TRIM56-203ENST00000467847 STK26Q9P289 416 aa25.72■■□□□ 1.71
TRIM56-203ENST00000467847 RGS12O14924 1447 aa25.71■■□□□ 1.71
TRIM56-203ENST00000467847 ESCO1Q5FWF5 840 aa25.7■■□□□ 1.7
TRIM56-203ENST00000467847 NGLY1Q96IV0 654 aa25.7■■□□□ 1.7
TRIM56-203ENST00000467847 TECPR2O15040 1411 aa25.7■■□□□ 1.7
TRIM56-203ENST00000467847 LRPPRCP42704 1394 aaKnown RBP25.69■■□□□ 1.7
TRIM56-203ENST00000467847 KNDC1Q76NI1 1749 aa25.68■■□□□ 1.7
TRIM56-203ENST00000467847 WAPLQ7Z5K2 1190 aa25.68■■□□□ 1.7
TRIM56-203ENST00000467847 PIK3C2GO75747 1445 aa25.68■■□□□ 1.7
TRIM56-203ENST00000467847 COL22A1Q8NFW1 1626 aaPredicted RBP25.67■■□□□ 1.7
TRIM56-203ENST00000467847 NPHP3Q7Z494 1330 aa25.66■■□□□ 1.7
TRIM56-203ENST00000467847 TMEM132EQ6IEE7 984 aa25.66■■□□□ 1.7
TRIM56-203ENST00000467847 SRCAPQ6ZRS2 3230 aa25.65■■□□□ 1.7
TRIM56-203ENST00000467847 ABCC11Q96J66 1382 aa25.65■■□□□ 1.7
TRIM56-203ENST00000467847 ACIN1Q9UKV3 1341 aaKnown RBP25.64■■□□□ 1.7
TRIM56-203ENST00000467847 PXDNQ92626 1479 aa25.64■■□□□ 1.69
TRIM56-203ENST00000467847 PLEKHH1Q9ULM0 1364 aa25.63■■□□□ 1.69
TRIM56-203ENST00000467847 ATAD2Q6PL18 1390 aa25.62■■□□□ 1.69
TRIM56-203ENST00000467847 NUTM2FA1L443 756 aa25.62■■□□□ 1.69
TRIM56-203ENST00000467847 YTHDC2Q9H6S0 1430 aaKnown RBP25.62■■□□□ 1.69
TRIM56-203ENST00000467847 FOXO3O43524 673 aa25.61■■□□□ 1.69
TRIM56-203ENST00000467847 XPCQ01831 940 aaPredicted RBP25.61■■□□□ 1.69
TRIM56-203ENST00000467847 USP21Q9UK80 565 aa25.61■■□□□ 1.69
TRIM56-203ENST00000467847 FMN2Q9NZ56 1722 aa25.6■■□□□ 1.69
TRIM56-203ENST00000467847 MYOM2P54296 1465 aa25.6■■□□□ 1.69
TRIM56-203ENST00000467847 ZRANB1Q9UGI0 708 aa25.58■■□□□ 1.69
TRIM56-203ENST00000467847 FNBP4Q8N3X1 1017 aaPredicted RBP25.57■■□□□ 1.68
TRIM56-203ENST00000467847 TRPC5Q9UL62 973 aaPredicted RBP25.57■■□□□ 1.68
TRIM56-203ENST00000467847 MARF1Q9Y4F3 1742 aaKnown RBP25.57■■□□□ 1.68
TRIM56-203ENST00000467847 NRXN1Q9ULB1 1477 aa25.56■■□□□ 1.68
TRIM56-203ENST00000467847 C14orf93Q9H972 538 aaKnown RBP25.56■■□□□ 1.68
TRIM56-203ENST00000467847 KIF1AQ12756 1690 aa25.55■■□□□ 1.68
TRIM56-203ENST00000467847 SIRT1Q96EB6 747 aa25.53■■□□□ 1.68
TRIM56-203ENST00000467847 CFAP70Q5T0N1 1121 aa25.52■■□□□ 1.68
TRIM56-203ENST00000467847 DHX57Q6P158 1386 aaKnown RBP25.52■■□□□ 1.68
TRIM56-203ENST00000467847 RAB3GAP2Q9H2M9 1393 aa25.52■■□□□ 1.68
TRIM56-203ENST00000467847 ATRNO75882 1429 aa25.52■■□□□ 1.68
TRIM56-203ENST00000467847 RGPD8O14715 1765 aaPredicted RBP25.51■■□□□ 1.67
TRIM56-203ENST00000467847 BCL9LQ86UU0 1499 aa25.47■■□□□ 1.67
TRIM56-203ENST00000467847 SPATA31A3Q5VYP0 1347 aa25.47■■□□□ 1.67
TRIM56-203ENST00000467847 SAFB2Q14151 953 aaKnown RBP eCLIP25.46■■□□□ 1.67
TRIM56-203ENST00000467847 KRT28Q7Z3Y7 464 aa25.46■■□□□ 1.67
TRIM56-203ENST00000467847 PRAM1Q96QH2 718 aa25.46■■□□□ 1.67
TRIM56-203ENST00000467847 PHF8Q9UPP1 1060 aa25.44■■□□□ 1.66
TRIM56-203ENST00000467847 CCDC125Q86Z20 511 aa25.43■■□□□ 1.66
TRIM56-203ENST00000467847 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.43■■□□□ 1.66
TRIM56-203ENST00000467847 DLC1Q96QB1 1528 aa25.42■■□□□ 1.66
TRIM56-203ENST00000467847 POGKQ9P215 609 aa25.42■■□□□ 1.66
TRIM56-203ENST00000467847 USP32Q8NFA0 1604 aa25.41■■□□□ 1.66
TRIM56-203ENST00000467847 TNS3Q68CZ2 1445 aa25.41■■□□□ 1.66
TRIM56-203ENST00000467847 PSME1Q06323 249 aa25.41■■□□□ 1.66
TRIM56-203ENST00000467847 EP400Q96L91 3159 aa25.4■■□□□ 1.66
TRIM56-203ENST00000467847 ADGRB1O14514 1584 aa25.39■■□□□ 1.66
TRIM56-203ENST00000467847 GJD4Q96KN9 370 aaPredicted RBP25.39■■□□□ 1.66
TRIM56-203ENST00000467847 SLIT2O94813 1529 aa25.38■■□□□ 1.65
TRIM56-203ENST00000467847 HAP1P54257 671 aaPredicted RBP25.38■■□□□ 1.65
TRIM56-203ENST00000467847 ADGRB2O60241 1585 aa25.38■■□□□ 1.65
TRIM56-203ENST00000467847 UNC5CLQ8IV45 518 aa25.37■■□□□ 1.65
TRIM56-203ENST00000467847 ANKARQ7Z5J8 1434 aa25.37■■□□□ 1.65
TRIM56-203ENST00000467847 KDM2AQ9Y2K7 1162 aa25.36■■□□□ 1.65
TRIM56-203ENST00000467847 SBNO1A3KN83 1393 aa25.35■■□□□ 1.65
TRIM56-203ENST00000467847 PLEKHG5O94827 1062 aa25.35■■□□□ 1.65
TRIM56-203ENST00000467847 LMOD2Q6P5Q4 547 aa25.35■■□□□ 1.65
TRIM56-203ENST00000467847 DCAF11Q8TEB1 546 aa25.35■■□□□ 1.65
TRIM56-203ENST00000467847 TRAK1Q9UPV9 953 aa25.35■■□□□ 1.65
TRIM56-203ENST00000467847 ABCA3Q99758 1704 aa25.34■■□□□ 1.65
TRIM56-203ENST00000467847 CABLES1Q8TDN4 633 aa25.34■■□□□ 1.65
TRIM56-203ENST00000467847 RALGAPBQ86X10 1494 aa25.34■■□□□ 1.65
TRIM56-203ENST00000467847 ARHGEF10O15013 1369 aa25.33■■□□□ 1.65
TRIM56-203ENST00000467847 GLI3P10071 1580 aa25.33■■□□□ 1.65
TRIM56-203ENST00000467847 PMFBP1Q8TBY8 1022 aa25.33■■□□□ 1.65
TRIM56-203ENST00000467847 HIRIP3Q9BW71 556 aaPredicted RBP25.32■■□□□ 1.64
TRIM56-203ENST00000467847 PLCH1Q4KWH8 1693 aa25.32■■□□□ 1.64
TRIM56-203ENST00000467847 MINK1Q8N4C8 1332 aaPredicted RBP25.31■■□□□ 1.64
TRIM56-203ENST00000467847 NWD2Q9ULI1 1742 aa25.3■■□□□ 1.64
TRIM56-203ENST00000467847 EIF3AQ14152 1382 aaKnown RBP25.29■■□□□ 1.64
TRIM56-203ENST00000467847 STAC3Q96MF2 364 aa25.28■■□□□ 1.64
TRIM56-203ENST00000467847 TULP4Q9NRJ4 1543 aa25.27■■□□□ 1.64
TRIM56-203ENST00000467847 TRPM3Q9HCF6 1732 aaPredicted RBP25.27■■□□□ 1.64
TRIM56-203ENST00000467847 HRCP23327 699 aa25.27■■□□□ 1.64
TRIM56-203ENST00000467847 BRWD3Q6RI45 1802 aa25.27■■□□□ 1.64
TRIM56-203ENST00000467847 SF3B2Q13435 895 aaKnown RBP25.26■■□□□ 1.63
TRIM56-203ENST00000467847 VPS72Q15906 364 aa25.25■■□□□ 1.63
TRIM56-203ENST00000467847 GPRASP1Q5JY77 1395 aa25.25■■□□□ 1.63
TRIM56-203ENST00000467847 BLMP54132 1417 aaPredicted RBP25.24■■□□□ 1.63
TRIM56-203ENST00000467847 PRR36Q9H6K5 1346 aa25.24■■□□□ 1.63
TRIM56-203ENST00000467847 WASLO00401 505 aaPredicted RBP25.24■■□□□ 1.63
TRIM56-203ENST00000467847 CCDC9Q9Y3X0 531 aaKnown RBP25.24■■□□□ 1.63
TRIM56-203ENST00000467847 ARHGEF28Q8N1W1 1705 aaKnown RBP25.23■■□□□ 1.63
TRIM56-203ENST00000467847 ALS2Q96Q42 1657 aa25.23■■□□□ 1.63
TRIM56-203ENST00000467847 FAM83GA6ND36 823 aa25.21■■□□□ 1.63
TRIM56-203ENST00000467847 SEPT12Q8IYM1 358 aa25.21■■□□□ 1.63
TRIM56-203ENST00000467847 NGDNQ8NEJ9 315 aaKnown RBP25.19■■□□□ 1.62
TRIM56-203ENST00000467847 ITSN1Q15811 1721 aa25.19■■□□□ 1.62
TRIM56-203ENST00000467847 DEFB132Q7Z7B7 95 aa25.18■■□□□ 1.62
TRIM56-203ENST00000467847 NRAPQ86VF7 1730 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms