RNA–Protein interactions for RNA: ENST00000467728.5

NR1H3-217, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-217ENST00000467728 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
NR1H3-217ENST00000467728 FAM135AQ9P2D6 1515 aa16.22■□□□□ 0.19
NR1H3-217ENST00000467728 ANP32BQ92688 251 aaKnown RBP16.21■□□□□ 0.19
NR1H3-217ENST00000467728 ABCC2Q92887 1545 aa16.21■□□□□ 0.19
NR1H3-217ENST00000467728 NCOA3Q9Y6Q9 1424 aa16.21■□□□□ 0.19
NR1H3-217ENST00000467728 XPCQ01831 940 aaPredicted RBP16.21■□□□□ 0.19
NR1H3-217ENST00000467728 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
NR1H3-217ENST00000467728 ASXL1Q8IXJ9 1541 aa16.21■□□□□ 0.19
NR1H3-217ENST00000467728 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
NR1H3-217ENST00000467728 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
NR1H3-217ENST00000467728 SSFA2P28290 1259 aa16.19■□□□□ 0.18
NR1H3-217ENST00000467728 AAMPQ13685 434 aa16.19■□□□□ 0.18
NR1H3-217ENST00000467728 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
NR1H3-217ENST00000467728 DDX49Q9Y6V7 483 aaKnown RBP16.19■□□□□ 0.18
NR1H3-217ENST00000467728 ABCC10Q5T3U5 1492 aa16.19■□□□□ 0.18
NR1H3-217ENST00000467728 UQCRHLA0A096LP55 91 aa16.18■□□□□ 0.18
NR1H3-217ENST00000467728 UQCRHP07919 91 aa16.18■□□□□ 0.18
NR1H3-217ENST00000467728 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
NR1H3-217ENST00000467728 SNX21Q969T3 373 aa16.18■□□□□ 0.18
NR1H3-217ENST00000467728 ATP10BO94823 1461 aa16.17■□□□□ 0.18
NR1H3-217ENST00000467728 TNNT2P45379 298 aaPredicted RBP16.17■□□□□ 0.18
NR1H3-217ENST00000467728 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
NR1H3-217ENST00000467728 ZHX1Q9UKY1 873 aaPredicted RBP16.17■□□□□ 0.18
NR1H3-217ENST00000467728 CIZ1Q9ULV3 898 aaPredicted RBP16.17■□□□□ 0.18
NR1H3-217ENST00000467728 RBM25P49756 843 aaKnown RBP16.17■□□□□ 0.18
NR1H3-217ENST00000467728 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
NR1H3-217ENST00000467728 TERF1P54274 439 aa16.16■□□□□ 0.18
NR1H3-217ENST00000467728 TCP11L2Q8N4U5 519 aa16.16■□□□□ 0.18
NR1H3-217ENST00000467728 CDC42BPAQ5VT25 1732 aa16.16■□□□□ 0.18
NR1H3-217ENST00000467728 LAMC1P11047 1609 aa16.16■□□□□ 0.18
NR1H3-217ENST00000467728 NCLP19338 710 aaKnown RBP16.16■□□□□ 0.18
NR1H3-217ENST00000467728 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
NR1H3-217ENST00000467728 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
NR1H3-217ENST00000467728 MAP7D2Q96T17 732 aa16.16■□□□□ 0.18
NR1H3-217ENST00000467728 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.16■□□□□ 0.18
NR1H3-217ENST00000467728 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
NR1H3-217ENST00000467728 PLEKHD1A6NEE1 506 aa16.14■□□□□ 0.17
NR1H3-217ENST00000467728 DZIP1LQ8IYY4 767 aaKnown RBP16.14■□□□□ 0.17
NR1H3-217ENST00000467728 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.17
NR1H3-217ENST00000467728 KIF2CQ99661 725 aa16.14■□□□□ 0.17
NR1H3-217ENST00000467728 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
NR1H3-217ENST00000467728 CCDC141Q6ZP82 1450 aa16.13■□□□□ 0.17
NR1H3-217ENST00000467728 KLHL40Q2TBA0 621 aa16.13■□□□□ 0.17
NR1H3-217ENST00000467728 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
NR1H3-217ENST00000467728 GOLGA6L22H0YM25 854 aa16.12■□□□□ 0.17
NR1H3-217ENST00000467728 ZKSCAN2Q63HK3 967 aa16.12■□□□□ 0.17
NR1H3-217ENST00000467728 CAVIN1Q6NZI2 390 aaKnown RBP16.12■□□□□ 0.17
NR1H3-217ENST00000467728 GAS2L2Q8NHY3 880 aa16.12■□□□□ 0.17
NR1H3-217ENST00000467728 LNPKQ9C0E8 428 aa16.12■□□□□ 0.17
NR1H3-217ENST00000467728 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
NR1H3-217ENST00000467728 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
NR1H3-217ENST00000467728 ITPRIPQ8IWB1 547 aa16.12■□□□□ 0.17
NR1H3-217ENST00000467728 RBSNQ9H1K0 784 aa16.12■□□□□ 0.17
NR1H3-217ENST00000467728 PTMSP20962 102 aa16.11■□□□□ 0.17
NR1H3-217ENST00000467728 SMAP1Q8IYB5 467 aaPredicted RBP16.11■□□□□ 0.17
NR1H3-217ENST00000467728 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
NR1H3-217ENST00000467728 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
NR1H3-217ENST00000467728 MYO5CQ9NQX4 1742 aa16.11■□□□□ 0.17
NR1H3-217ENST00000467728 ZNF500O60304 480 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-217ENST00000467728 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-217ENST00000467728 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-217ENST00000467728 MCTP1Q6DN14 999 aa16.1■□□□□ 0.17
NR1H3-217ENST00000467728 SYNMO15061 1565 aa16.09■□□□□ 0.17
NR1H3-217ENST00000467728 ZSCAN23Q3MJ62 389 aa16.09■□□□□ 0.17
NR1H3-217ENST00000467728 EIF2AK4Q9P2K8 1649 aaKnown RBP16.09■□□□□ 0.17
NR1H3-217ENST00000467728 TRIM27P14373 513 aa16.09■□□□□ 0.17
NR1H3-217ENST00000467728 PRIM1P49642 420 aaKnown RBP16.09■□□□□ 0.17
NR1H3-217ENST00000467728 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
NR1H3-217ENST00000467728 WDR63Q8IWG1 891 aa16.08■□□□□ 0.16
NR1H3-217ENST00000467728 JARID2Q92833 1246 aaPredicted RBP16.08■□□□□ 0.16
NR1H3-217ENST00000467728 AK9Q5TCS8 1911 aa16.07■□□□□ 0.16
NR1H3-217ENST00000467728 SMC4Q9NTJ3 1288 aa16.07■□□□□ 0.16
NR1H3-217ENST00000467728 DYNC1I1O14576 645 aa16.07■□□□□ 0.16
NR1H3-217ENST00000467728 ZNF445P59923 1031 aa16.07■□□□□ 0.16
NR1H3-217ENST00000467728 HS1BP3Q53T59 392 aa16.07■□□□□ 0.16
NR1H3-217ENST00000467728 PDLIM2Q96JY6 352 aa16.06■□□□□ 0.16
NR1H3-217ENST00000467728 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
NR1H3-217ENST00000467728 ZKSCAN5Q9Y2L8 839 aa16.06■□□□□ 0.16
NR1H3-217ENST00000467728 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
NR1H3-217ENST00000467728 IBTKQ9P2D0 1353 aaPredicted RBP16.06■□□□□ 0.16
NR1H3-217ENST00000467728 POLR3AO14802 1390 aaPredicted RBP16.04■□□□□ 0.16
NR1H3-217ENST00000467728 PKP1Q13835 747 aa16.04■□□□□ 0.16
NR1H3-217ENST00000467728 TSC1Q92574 1164 aa16.04■□□□□ 0.16
NR1H3-217ENST00000467728 NUCB1Q02818 461 aa16.04■□□□□ 0.16
NR1H3-217ENST00000467728 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
NR1H3-217ENST00000467728 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
NR1H3-217ENST00000467728 CLEC17AQ6ZS10 378 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 TMEM57Q8N5G2 664 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 LMBRD1Q9NUN5 540 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
NR1H3-217ENST00000467728 MTERF4Q7Z6M4 381 aaKnown RBP16.03■□□□□ 0.16
NR1H3-217ENST00000467728 MORC1Q86VD1 984 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 MYOM1P52179 1685 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 SASS6Q6UVJ0 657 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 CHD1LQ86WJ1 897 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
NR1H3-217ENST00000467728 NOB1Q9ULX3 412 aaKnown RBP16.03■□□□□ 0.16
NR1H3-217ENST00000467728 SCAF11Q99590 1463 aaKnown RBP16.02■□□□□ 0.16
NR1H3-217ENST00000467728 RNF17Q9BXT8 1623 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms