RNA–Protein interactions for RNA: ENST00000467700.5

HMGN2-206, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-206ENST00000467700 BRICD5Q6PL45 260 aa13.61□□□□□ -0.23
HMGN2-206ENST00000467700 FCF1Q9Y324 198 aaKnown RBP13.61□□□□□ -0.23
HMGN2-206ENST00000467700 GDF9O60383 454 aa13.58□□□□□ -0.24
HMGN2-206ENST00000467700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.245e-39■□□□□ 10.8
HMGN2-206ENST00000467700 PRR20EP86478 221 aa13.57□□□□□ -0.24
HMGN2-206ENST00000467700 PRR20CP86479 221 aa13.57□□□□□ -0.24
HMGN2-206ENST00000467700 PRR20DP86480 221 aa13.57□□□□□ -0.24
HMGN2-206ENST00000467700 PRR20BP86481 221 aa13.57□□□□□ -0.24
HMGN2-206ENST00000467700 PRR20AP86496 221 aa13.57□□□□□ -0.24
HMGN2-206ENST00000467700 GRIPAP1Q4V328 841 aa13.57□□□□□ -0.24
HMGN2-206ENST00000467700 SALL2Q9Y467 1007 aaPredicted RBP13.57□□□□□ -0.24
HMGN2-206ENST00000467700 WIZO95785 1651 aa13.56□□□□□ -0.24
HMGN2-206ENST00000467700 HLA-CQ95604 372 aa13.56□□□□□ -0.24
HMGN2-206ENST00000467700 KDM4AO75164 1064 aa13.55□□□□□ -0.24
HMGN2-206ENST00000467700 FOXC1Q12948 553 aa13.55□□□□□ -0.24
HMGN2-206ENST00000467700 PKDCCQ504Y2 493 aa13.55□□□□□ -0.24
HMGN2-206ENST00000467700 FAM187AA6NFU0 413 aa13.52□□□□□ -0.25
HMGN2-206ENST00000467700 MSS51Q4VC12 460 aa13.52□□□□□ -0.25
HMGN2-206ENST00000467700 LMOD2Q6P5Q4 547 aa13.52□□□□□ -0.25
HMGN2-206ENST00000467700 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
HMGN2-206ENST00000467700 RPIAP49247 311 aa13.51□□□□□ -0.25
HMGN2-206ENST00000467700 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
HMGN2-206ENST00000467700 DGAT1O75907 488 aa13.5□□□□□ -0.25
HMGN2-206ENST00000467700 MYT1Q01538 1121 aa13.5□□□□□ -0.25
HMGN2-206ENST00000467700 Q3C1V9 767 aa13.5□□□□□ -0.25
HMGN2-206ENST00000467700 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
HMGN2-206ENST00000467700 GUCA2AQ02747 115 aa13.49□□□□□ -0.25
HMGN2-206ENST00000467700 ZNF787Q6DD87 383 aa13.49□□□□□ -0.25
HMGN2-206ENST00000467700 FAM217BQ9NTX9 383 aaPredicted RBP13.49□□□□□ -0.25
HMGN2-206ENST00000467700 CLCN1P35523 988 aa13.48□□□□□ -0.25
HMGN2-206ENST00000467700 HOXA2O43364 376 aa13.47□□□□□ -0.25
HMGN2-206ENST00000467700 REPIN1Q9BWE0 567 aaKnown RBP13.47□□□□□ -0.25
HMGN2-206ENST00000467700 CD2BP2O95400 341 aaKnown RBP13.46□□□□□ -0.25
HMGN2-206ENST00000467700 KRI1Q8N9T8 703 aaKnown RBP13.46□□□□□ -0.25
HMGN2-206ENST00000467700 USP46P62068 366 aa13.45□□□□□ -0.26
HMGN2-206ENST00000467700 USB1Q9BQ65 265 aaKnown RBP13.45□□□□□ -0.26
HMGN2-206ENST00000467700 ZBTB24O43167 697 aaPredicted RBP13.43□□□□□ -0.26
HMGN2-206ENST00000467700 MMP16P51512 607 aa13.43□□□□□ -0.26
HMGN2-206ENST00000467700 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
HMGN2-206ENST00000467700 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
HMGN2-206ENST00000467700 SYMPKQ92797 1274 aaKnown RBP13.42□□□□□ -0.26
HMGN2-206ENST00000467700 ST8SIA5O15466 376 aa13.41□□□□□ -0.26
HMGN2-206ENST00000467700 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
HMGN2-206ENST00000467700 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
HMGN2-206ENST00000467700 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
HMGN2-206ENST00000467700 POTECB2RU33 542 aa13.39□□□□□ -0.27
HMGN2-206ENST00000467700 ZC3H15Q8WU90 426 aaKnown RBP13.39□□□□□ -0.27
HMGN2-206ENST00000467700 ZMYND10O75800 440 aa13.38□□□□□ -0.27
HMGN2-206ENST00000467700 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
HMGN2-206ENST00000467700 TOR4AQ9NXH8 423 aa13.38□□□□□ -0.27
HMGN2-206ENST00000467700 SSTR3P32745 418 aaPredicted RBP13.37□□□□□ -0.27
HMGN2-206ENST00000467700 TRIM32Q13049 653 aa13.37□□□□□ -0.27
HMGN2-206ENST00000467700 CYP4X1Q8N118 509 aa13.37□□□□□ -0.27
HMGN2-206ENST00000467700 TTLL12Q14166 644 aaPredicted RBP13.36□□□□□ -0.27
HMGN2-206ENST00000467700 AAASQ9NRG9 546 aa13.36□□□□□ -0.27
HMGN2-206ENST00000467700 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
HMGN2-206ENST00000467700 CFTRP13569 1480 aa13.36□□□□□ -0.27
HMGN2-206ENST00000467700 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
HMGN2-206ENST00000467700 PCDHGC3Q9UN70 934 aa13.33□□□□□ -0.28
HMGN2-206ENST00000467700 FDX1P10109 184 aa13.32□□□□□ -0.28
HMGN2-206ENST00000467700 ZNF775Q96BV0 537 aaPredicted RBP13.32□□□□□ -0.28
HMGN2-206ENST00000467700 TTC24A2A3L6 582 aaPredicted RBP13.31□□□□□ -0.28
HMGN2-206ENST00000467700 JUNDP17535 347 aa13.31□□□□□ -0.28
HMGN2-206ENST00000467700 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
HMGN2-206ENST00000467700 NESP48681 1621 aa13.31□□□□□ -0.28
HMGN2-206ENST00000467700 WNT7AO00755 349 aa13.3□□□□□ -0.28
HMGN2-206ENST00000467700 NDUFV2P19404 249 aa13.3□□□□□ -0.28
HMGN2-206ENST00000467700 AMHR2Q16671 573 aa13.3□□□□□ -0.28
HMGN2-206ENST00000467700 DACH1Q9UI36 760 aa13.3□□□□□ -0.28
HMGN2-206ENST00000467700 C6orf229H3BNL8 230 aa13.29□□□□□ -0.28
HMGN2-206ENST00000467700 GIGYF2Q6Y7W6 1299 aaKnown RBP13.29□□□□□ -0.28
HMGN2-206ENST00000467700 RETREG3Q86VR2 466 aa13.29□□□□□ -0.28
HMGN2-206ENST00000467700 MRGPRX2Q96LB1 330 aa13.29□□□□□ -0.28
HMGN2-206ENST00000467700 MOXD2PA6NHM9 499 aa13.27□□□□□ -0.29
HMGN2-206ENST00000467700 ERCC6Q03468 1493 aa13.27□□□□□ -0.29
HMGN2-206ENST00000467700 SUPT5HO00267 1087 aaKnown RBP13.26□□□□□ -0.29
HMGN2-206ENST00000467700 AVPP01185 164 aa13.26□□□□□ -0.29
HMGN2-206ENST00000467700 SKOR1P84550 965 aa13.26□□□□□ -0.29
HMGN2-206ENST00000467700 SNIP1Q8TAD8 396 aaKnown RBP13.25□□□□□ -0.29
HMGN2-206ENST00000467700 J3QL48 77 aa13.24□□□□□ -0.29
HMGN2-206ENST00000467700 SMPD1P17405 629 aa13.24□□□□□ -0.29
HMGN2-206ENST00000467700 PTCRAQ6ISU1 281 aaPredicted RBP13.24□□□□□ -0.29
HMGN2-206ENST00000467700 CRIPAKQ8N1N5 446 aa13.24□□□□□ -0.29
HMGN2-206ENST00000467700 NUDT12Q9BQG2 462 aa13.24□□□□□ -0.29
HMGN2-206ENST00000467700 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
HMGN2-206ENST00000467700 AXIN1O15169 862 aa13.23□□□□□ -0.29
HMGN2-206ENST00000467700 RC3H1Q5TC82 1133 aaKnown RBP13.23□□□□□ -0.29
HMGN2-206ENST00000467700 CUX2O14529 1486 aa13.23□□□□□ -0.29
HMGN2-206ENST00000467700 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
HMGN2-206ENST00000467700 TRIM66O15016 1216 aa13.21□□□□□ -0.29
HMGN2-206ENST00000467700 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
HMGN2-206ENST00000467700 FANCD2Q9BXW9 1451 aa13.2□□□□□ -0.3
HMGN2-206ENST00000467700 MS4A1P11836 297 aa13.19□□□□□ -0.3
HMGN2-206ENST00000467700 WNT7BP56706 349 aa13.19□□□□□ -0.3
HMGN2-206ENST00000467700 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
HMGN2-206ENST00000467700 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
HMGN2-206ENST00000467700 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
HMGN2-206ENST00000467700 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
HMGN2-206ENST00000467700 PRR7Q8TB68 274 aa13.17□□□□□ -0.3
HMGN2-206ENST00000467700 CCNYL3P0C7X3 344 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms