RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 TRIM66O15016 1216 aa11.93□□□□□ -0.5
ATG3-204ENST00000467275 TRAF7Q6Q0C0 670 aa11.93□□□□□ -0.5
ATG3-204ENST00000467275 CD2BP2O95400 341 aaKnown RBP11.92□□□□□ -0.5
ATG3-204ENST00000467275 RPIAP49247 311 aa11.92□□□□□ -0.5
ATG3-204ENST00000467275 ZBTB24O43167 697 aaPredicted RBP11.91□□□□□ -0.5
ATG3-204ENST00000467275 FDX1P10109 184 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 MMP16P51512 607 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 PRR20EP86478 221 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 PRR20CP86479 221 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 PRR20DP86480 221 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 PRR20BP86481 221 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 PRR20AP86496 221 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 PARP9Q8IXQ6 854 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 SPIRE2Q8WWL2 714 aa11.9□□□□□ -0.5
ATG3-204ENST00000467275 TNFRSF10AO00220 468 aa11.89□□□□□ -0.51
ATG3-204ENST00000467275 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
ATG3-204ENST00000467275 SYMPKQ92797 1274 aaKnown RBP11.89□□□□□ -0.51
ATG3-204ENST00000467275 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
ATG3-204ENST00000467275 FOXC1Q12948 553 aa11.88□□□□□ -0.51
ATG3-204ENST00000467275 GDF9O60383 454 aa11.87□□□□□ -0.51
ATG3-204ENST00000467275 DXOO77932 396 aaKnown RBP11.87□□□□□ -0.51
ATG3-204ENST00000467275 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
ATG3-204ENST00000467275 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
ATG3-204ENST00000467275 SLC24A3Q9HC58 644 aa11.86□□□□□ -0.51
ATG3-204ENST00000467275 MOXD2PA6NHM9 499 aa11.85□□□□□ -0.51
ATG3-204ENST00000467275 LCE2BO14633 110 aa11.85□□□□□ -0.51
ATG3-204ENST00000467275 NDUFV2P19404 249 aa11.85□□□□□ -0.51
ATG3-204ENST00000467275 PKDCCQ504Y2 493 aa11.85□□□□□ -0.51
ATG3-204ENST00000467275 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
ATG3-204ENST00000467275 BCANQ96GW7 911 aa11.85□□□□□ -0.51
ATG3-204ENST00000467275 PCDHGC3Q9UN70 934 aa11.85□□□□□ -0.51
ATG3-204ENST00000467275 JUNDP17535 347 aa11.83□□□□□ -0.52
ATG3-204ENST00000467275 PDE4DQ08499 809 aa11.83□□□□□ -0.52
ATG3-204ENST00000467275 DIXDC1Q155Q3 683 aa11.83□□□□□ -0.52
ATG3-204ENST00000467275 PKD2L1Q9P0L9 805 aa11.83□□□□□ -0.52
ATG3-204ENST00000467275 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
ATG3-204ENST00000467275 MS4A1P11836 297 aa11.82□□□□□ -0.52
ATG3-204ENST00000467275 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
ATG3-204ENST00000467275 DGAT1O75907 488 aa11.81□□□□□ -0.52
ATG3-204ENST00000467275 TRIM32Q13049 653 aa11.8□□□□□ -0.52
ATG3-204ENST00000467275 MTMR2Q13614 643 aa11.77□□□□□ -0.53
ATG3-204ENST00000467275 CYP4X1Q8N118 509 aa11.77□□□□□ -0.53
ATG3-204ENST00000467275 NUDT12Q9BQG2 462 aa11.77□□□□□ -0.53
ATG3-204ENST00000467275 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
ATG3-204ENST00000467275 GJA5P36382 358 aa11.75□□□□□ -0.53
ATG3-204ENST00000467275 RSBN1LQ6PCB5 846 aaPredicted RBP11.75□□□□□ -0.53
ATG3-204ENST00000467275 MYT1Q01538 1121 aa11.74□□□□□ -0.53
ATG3-204ENST00000467275 PRR7Q8TB68 274 aa11.74□□□□□ -0.53
ATG3-204ENST00000467275 TTC24A2A3L6 582 aaPredicted RBP11.73□□□□□ -0.53
ATG3-204ENST00000467275 WNT7AO00755 349 aa11.73□□□□□ -0.53
ATG3-204ENST00000467275 TOR4AQ9NXH8 423 aa11.73□□□□□ -0.53
ATG3-204ENST00000467275 SPTLC1O15269 473 aa11.72□□□□□ -0.53
ATG3-204ENST00000467275 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
ATG3-204ENST00000467275 PCDHB15Q9Y5E8 787 aa11.72□□□□□ -0.53
ATG3-204ENST00000467275 CCNYL3P0C7X3 344 aa11.71□□□□□ -0.53
ATG3-204ENST00000467275 PTPRNQ16849 979 aa11.7□□□□□ -0.54
ATG3-204ENST00000467275 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
ATG3-204ENST00000467275 WNT7BP56706 349 aa11.69□□□□□ -0.54
ATG3-204ENST00000467275 CSPP1Q1MSJ5 1256 aa11.69□□□□□ -0.54
ATG3-204ENST00000467275 ZNF787Q6DD87 383 aa11.69□□□□□ -0.54
ATG3-204ENST00000467275 DESI1Q6ICB0 168 aa11.69□□□□□ -0.54
ATG3-204ENST00000467275 PTCRAQ6ISU1 281 aaPredicted RBP11.69□□□□□ -0.54
ATG3-204ENST00000467275 MRGPRX2Q96LB1 330 aa11.69□□□□□ -0.54
ATG3-204ENST00000467275 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
ATG3-204ENST00000467275 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
ATG3-204ENST00000467275 HRCP23327 699 aa11.67□□□□□ -0.54
ATG3-204ENST00000467275 SKOR1P84550 965 aa11.67□□□□□ -0.54
ATG3-204ENST00000467275 MYSM1Q5VVJ2 828 aa11.67□□□□□ -0.54
ATG3-204ENST00000467275 EVA1BQ9NVM1 165 aa11.67□□□□□ -0.54
ATG3-204ENST00000467275 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
ATG3-204ENST00000467275 ST8SIA5O15466 376 aa11.65□□□□□ -0.54
ATG3-204ENST00000467275 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
ATG3-204ENST00000467275 NUTM2BA6NNL0 878 aaPredicted RBP11.64□□□□□ -0.55
ATG3-204ENST00000467275 NUTM2EB1AL46 878 aaPredicted RBP11.64□□□□□ -0.55
ATG3-204ENST00000467275 CFAP99D6REC4 459 aa11.64□□□□□ -0.55
ATG3-204ENST00000467275 KCNH2Q12809 1159 aa11.64□□□□□ -0.55
ATG3-204ENST00000467275 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
ATG3-204ENST00000467275 NUTM2AQ8IVF1 878 aaPredicted RBP11.64□□□□□ -0.55
ATG3-204ENST00000467275 UNC93B1Q9H1C4 597 aa11.64□□□□□ -0.55
ATG3-204ENST00000467275 AAASQ9NRG9 546 aa11.64□□□□□ -0.55
ATG3-204ENST00000467275 LIMD1Q9UGP4 676 aa11.64□□□□□ -0.55
ATG3-204ENST00000467275 RSPH6AQ9H0K4 717 aa11.63□□□□□ -0.55
ATG3-204ENST00000467275 AVPP01185 164 aa11.62□□□□□ -0.55
ATG3-204ENST00000467275 CTHP32929 405 aa11.62□□□□□ -0.55
ATG3-204ENST00000467275 LYPD8Q6UX82 237 aa11.62□□□□□ -0.55
ATG3-204ENST00000467275 EHBP1Q8NDI1 1231 aa11.62□□□□□ -0.55
ATG3-204ENST00000467275 TSC1Q92574 1164 aa11.62□□□□□ -0.55
ATG3-204ENST00000467275 AXIN1O15169 862 aa11.61□□□□□ -0.55
ATG3-204ENST00000467275 SMPD1P17405 629 aa11.61□□□□□ -0.55
ATG3-204ENST00000467275 J3QL48 77 aa11.6□□□□□ -0.55
ATG3-204ENST00000467275 CLK2P49760 499 aaKnown RBP11.6□□□□□ -0.55
ATG3-204ENST00000467275 QPCTQ16769 361 aa11.6□□□□□ -0.55
ATG3-204ENST00000467275 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
ATG3-204ENST00000467275 TUSC1Q2TAM9 212 aa11.6□□□□□ -0.55
ATG3-204ENST00000467275 LINC01559Q495D7 138 aa11.6□□□□□ -0.55
ATG3-204ENST00000467275 POLR3EQ9NVU0 708 aa11.6□□□□□ -0.55
ATG3-204ENST00000467275 SH3BP2P78314 561 aa11.59□□□□□ -0.55
ATG3-204ENST00000467275 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
ATG3-204ENST00000467275 BAP1Q92560 729 aa11.59□□□□□ -0.55
ATG3-204ENST00000467275 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms