RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 CHGAP10645 457 aaKnown RBP19.14■□□□□ 0.65
RRP1-201ENST00000467112 BECN1Q14457 450 aa19.14■□□□□ 0.65
RRP1-201ENST00000467112 PMFBP1Q8TBY8 1022 aa19.13■□□□□ 0.65
RRP1-201ENST00000467112 NLRP1Q9C000 1473 aa19.13■□□□□ 0.65
RRP1-201ENST00000467112 POGKQ9P215 609 aa19.13■□□□□ 0.65
RRP1-201ENST00000467112 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
RRP1-201ENST00000467112 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
RRP1-201ENST00000467112 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
RRP1-201ENST00000467112 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
RRP1-201ENST00000467112 SBNO2Q9Y2G9 1366 aa19.12■□□□□ 0.65
RRP1-201ENST00000467112 MTHFSP49914 203 aa19.11■□□□□ 0.65
RRP1-201ENST00000467112 SHPRHQ149N8 1683 aa19.11■□□□□ 0.65
RRP1-201ENST00000467112 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
RRP1-201ENST00000467112 NEURL4Q96JN8 1562 aa19.11■□□□□ 0.65
RRP1-201ENST00000467112 ARAP3Q8WWN8 1544 aa19.11■□□□□ 0.65
RRP1-201ENST00000467112 NOS1P29475 1434 aa19.1■□□□□ 0.65
RRP1-201ENST00000467112 FANCAO15360 1455 aa19.1■□□□□ 0.65
RRP1-201ENST00000467112 INO80Q9ULG1 1556 aaPredicted RBP19.09■□□□□ 0.65
RRP1-201ENST00000467112 WDR63Q8IWG1 891 aa19.09■□□□□ 0.65
RRP1-201ENST00000467112 KIF1BO60333 1816 aa19.09■□□□□ 0.65
RRP1-201ENST00000467112 TMEM132EQ6IEE7 984 aa19.09■□□□□ 0.65
RRP1-201ENST00000467112 MROH1Q8NDA8 1641 aa19.09■□□□□ 0.65
RRP1-201ENST00000467112 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
RRP1-201ENST00000467112 MROH2AA6NES4 1674 aa19.08■□□□□ 0.65
RRP1-201ENST00000467112 UPF2Q9HAU5 1272 aaKnown RBP19.08■□□□□ 0.64
RRP1-201ENST00000467112 TBC1D32Q96NH3 1257 aa19.07■□□□□ 0.64
RRP1-201ENST00000467112 NRXN1Q9ULB1 1477 aa19.07■□□□□ 0.64
RRP1-201ENST00000467112 MYO3AQ8NEV4 1616 aa19.07■□□□□ 0.64
RRP1-201ENST00000467112 ANTXR1Q9H6X2 564 aa19.07■□□□□ 0.64
RRP1-201ENST00000467112 IFT172Q9UG01 1749 aa19.06■□□□□ 0.64
RRP1-201ENST00000467112 AAMPQ13685 434 aa19.06■□□□□ 0.64
RRP1-201ENST00000467112 TBC1D2Q9BYX2 928 aa19.06■□□□□ 0.64
RRP1-201ENST00000467112 RWDD1Q9H446 243 aaPredicted RBP19.06■□□□□ 0.64
RRP1-201ENST00000467112 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
RRP1-201ENST00000467112 ADGRL1O94910 1474 aa19.05■□□□□ 0.64
RRP1-201ENST00000467112 CFAP53Q96M91 514 aa19.04■□□□□ 0.64
RRP1-201ENST00000467112 ABCA9Q8IUA7 1624 aa19.04■□□□□ 0.64
RRP1-201ENST00000467112 ZNF518AQ6AHZ1 1483 aa19.04■□□□□ 0.64
RRP1-201ENST00000467112 U2AF1L5P0DN76 240 aaPredicted RBP19.03■□□□□ 0.64
RRP1-201ENST00000467112 PRKCSHP14314 528 aaPredicted RBP19.03■□□□□ 0.64
RRP1-201ENST00000467112 U2AF1Q01081 240 aaKnown RBP eCLIP19.03■□□□□ 0.64
RRP1-201ENST00000467112 CCDC27Q2M243 656 aa19.03■□□□□ 0.64
RRP1-201ENST00000467112 C14orf93Q9H972 538 aaKnown RBP19.03■□□□□ 0.64
RRP1-201ENST00000467112 MVPQ14764 893 aaKnown RBP19.03■□□□□ 0.64
RRP1-201ENST00000467112 SPRYD3Q8NCJ5 442 aa19.03■□□□□ 0.64
RRP1-201ENST00000467112 MYH16Q9H6N6 1097 aa19.03■□□□□ 0.64
RRP1-201ENST00000467112 PPRC1Q5VV67 1664 aaKnown RBP19.03■□□□□ 0.64
RRP1-201ENST00000467112 TSR2Q969E8 191 aaKnown RBP19.01■□□□□ 0.63
RRP1-201ENST00000467112 FTSJ3Q8IY81 847 aaKnown RBP19■□□□□ 0.63
RRP1-201ENST00000467112 ZKSCAN2Q63HK3 967 aa19■□□□□ 0.63
RRP1-201ENST00000467112 SETBP1Q9Y6X0 1596 aa19■□□□□ 0.63
RRP1-201ENST00000467112 CFAP65Q6ZU64 1925 aaKnown RBP19■□□□□ 0.63
RRP1-201ENST00000467112 QRICH2Q9H0J4 1663 aa19■□□□□ 0.63
RRP1-201ENST00000467112 ADGRB3O60242 1522 aa18.99■□□□□ 0.63
RRP1-201ENST00000467112 NUTM2DQ5VT03 806 aaPredicted RBP18.99■□□□□ 0.63
RRP1-201ENST00000467112 DZIP1LQ8IYY4 767 aaKnown RBP18.99■□□□□ 0.63
RRP1-201ENST00000467112 ZMYM3Q14202 1370 aa18.99■□□□□ 0.63
RRP1-201ENST00000467112 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
RRP1-201ENST00000467112 ADGRB1O14514 1584 aa18.97■□□□□ 0.63
RRP1-201ENST00000467112 GGT6Q6P531 493 aa18.96■□□□□ 0.63
RRP1-201ENST00000467112 ARXQ96QS3 562 aa18.96■□□□□ 0.63
RRP1-201ENST00000467112 SMC4Q9NTJ3 1288 aa18.96■□□□□ 0.63
RRP1-201ENST00000467112 ZC3H13Q5T200 1668 aaKnown RBP18.96■□□□□ 0.63
RRP1-201ENST00000467112 MFAP1P55081 439 aaKnown RBP18.95■□□□□ 0.62
RRP1-201ENST00000467112 EXOSC9Q06265 439 aaKnown RBP18.95■□□□□ 0.62
RRP1-201ENST00000467112 CABP2Q9NPB3 220 aa18.95■□□□□ 0.62
RRP1-201ENST00000467112 NPATQ14207 1427 aa18.95■□□□□ 0.62
RRP1-201ENST00000467112 TRIM27P14373 513 aa18.95■□□□□ 0.62
RRP1-201ENST00000467112 SAFB2Q14151 953 aaKnown RBP eCLIP18.95■□□□□ 0.62
RRP1-201ENST00000467112 U2SURPO15042 1029 aaKnown RBP18.94■□□□□ 0.62
RRP1-201ENST00000467112 C22orf23Q9BZE7 217 aa18.94■□□□□ 0.62
RRP1-201ENST00000467112 KIDINS220Q9ULH0 1771 aa18.94■□□□□ 0.62
RRP1-201ENST00000467112 EIF5BO60841 1220 aaKnown RBP18.94■□□□□ 0.62
RRP1-201ENST00000467112 GLI2P10070 1586 aa18.94■□□□□ 0.62
RRP1-201ENST00000467112 EVC2Q86UK5 1308 aa18.93■□□□□ 0.62
RRP1-201ENST00000467112 ITPRIPQ8IWB1 547 aa18.93■□□□□ 0.62
RRP1-201ENST00000467112 SSH1Q8WYL5 1049 aa18.93■□□□□ 0.62
RRP1-201ENST00000467112 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
RRP1-201ENST00000467112 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
RRP1-201ENST00000467112 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
RRP1-201ENST00000467112 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
RRP1-201ENST00000467112 ASXL2Q76L83 1435 aa18.92■□□□□ 0.62
RRP1-201ENST00000467112 CFAP74Q9C0B2 1584 aa18.92■□□□□ 0.62
RRP1-201ENST00000467112 PPLO60437 1756 aa18.92■□□□□ 0.62
RRP1-201ENST00000467112 L1TD1Q5T7N2 865 aaKnown RBP18.91■□□□□ 0.62
RRP1-201ENST00000467112 MCM4P33991 863 aa18.9■□□□□ 0.62
RRP1-201ENST00000467112 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
RRP1-201ENST00000467112 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
RRP1-201ENST00000467112 GZF1Q9H116 711 aaPredicted RBP18.9■□□□□ 0.62
RRP1-201ENST00000467112 TRIM35Q9UPQ4 493 aa18.9■□□□□ 0.62
RRP1-201ENST00000467112 CD109Q6YHK3 1445 aa18.9■□□□□ 0.62
RRP1-201ENST00000467112 GGNBP2Q9H3C7 697 aa18.9■□□□□ 0.62
RRP1-201ENST00000467112 PLEKHF1Q96S99 279 aa18.9■□□□□ 0.62
RRP1-201ENST00000467112 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
RRP1-201ENST00000467112 CT47B1P0C2W7 299 aaPredicted RBP18.89■□□□□ 0.61
RRP1-201ENST00000467112 HDAC1Q13547 482 aaPredicted RBP18.89■□□□□ 0.61
RRP1-201ENST00000467112 ATF7IPQ6VMQ6 1270 aa18.89■□□□□ 0.61
RRP1-201ENST00000467112 NOB1Q9ULX3 412 aaKnown RBP18.89■□□□□ 0.61
RRP1-201ENST00000467112 ADGRB2O60241 1585 aa18.89■□□□□ 0.61
RRP1-201ENST00000467112 NSD2O96028 1365 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms